RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-233	ENST00000638888	FANCI	Q9NVI1	1328 aa		11.56	□□□□□ -0.56
STRADA-233	ENST00000638888	CFAP74	Q9C0B2	1584 aa		11.55	□□□□□ -0.56
STRADA-233	ENST00000638888	MAP3K4	Q9Y6R4	1608 aa		11.55	□□□□□ -0.56
STRADA-233	ENST00000638888	NPM1	P06748	294 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
STRADA-233	ENST00000638888	MYOM1	P52179	1685 aa		11.55	□□□□□ -0.56
STRADA-233	ENST00000638888	BLM	P54132	1417 aa	Predicted RBP	11.54	□□□□□ -0.56
STRADA-233	ENST00000638888	PPRC1	Q5VV67	1664 aa	Known RBP	11.54	□□□□□ -0.56
STRADA-233	ENST00000638888	ZNF518A	Q6AHZ1	1483 aa		11.53	□□□□□ -0.56
STRADA-233	ENST00000638888	CNGB1	Q14028	1251 aa	Predicted RBP	11.53	□□□□□ -0.56
STRADA-233	ENST00000638888	ABCA6	Q8N139	1617 aa		11.52	□□□□□ -0.56
STRADA-233	ENST00000638888	PANK3	Q9H999	370 aa		11.52	□□□□□ -0.56
STRADA-233	ENST00000638888	MROH2A	A6NES4	1674 aa		11.52	□□□□□ -0.56
STRADA-233	ENST00000638888	NRXN1	Q9ULB1	1477 aa		11.52	□□□□□ -0.57
STRADA-233	ENST00000638888	MYO3A	Q8NEV4	1616 aa		11.52	□□□□□ -0.57
STRADA-233	ENST00000638888	PDE3B	Q13370	1112 aa		11.51	□□□□□ -0.57
STRADA-233	ENST00000638888	KDM5A	P29375	1690 aa	Known RBP	11.51	□□□□□ -0.57
STRADA-233	ENST00000638888	MLH3	Q9UHC1	1453 aa		11.5	□□□□□ -0.57
STRADA-233	ENST00000638888	ADGRB3	O60242	1522 aa		11.5	□□□□□ -0.57
STRADA-233	ENST00000638888	FRMPD1	Q5SYB0	1578 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	UGGT1	Q9NYU2	1555 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	EIF3A	Q14152	1382 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	NPC1L1	Q9UHC9	1359 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	KIF3B	O15066	747 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	B4GALNT3	Q6L9W6	998 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	HECW2	Q9P2P5	1572 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	POGZ	Q7Z3K3	1410 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	MSH5	O43196	834 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	CDCA8	Q53HL2	280 aa		11.49	□□□□□ -0.57
STRADA-233	ENST00000638888	SETBP1	Q9Y6X0	1596 aa		11.48	□□□□□ -0.57
STRADA-233	ENST00000638888	MYT1L	Q9UL68	1186 aa		11.48	□□□□□ -0.57
STRADA-233	ENST00000638888	ASXL1	Q8IXJ9	1541 aa		11.48	□□□□□ -0.57
STRADA-233	ENST00000638888	PPL	O60437	1756 aa		11.47	□□□□□ -0.57
STRADA-233	ENST00000638888	KIF13A	Q9H1H9	1805 aa		11.46	□□□□□ -0.57
STRADA-233	ENST00000638888	SBNO2	Q9Y2G9	1366 aa		11.46	□□□□□ -0.57
STRADA-233	ENST00000638888	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.46	□□□□□ -0.58
STRADA-233	ENST00000638888	CC2D1B	Q5T0F9	858 aa	Known RBP	11.46	□□□□□ -0.58
STRADA-233	ENST00000638888	PIK3C2G	O75747	1445 aa		11.45	□□□□□ -0.58
STRADA-233	ENST00000638888	CD109	Q6YHK3	1445 aa		11.45	□□□□□ -0.58
STRADA-233	ENST00000638888	ZC3H13	Q5T200	1668 aa	Known RBP	11.45	□□□□□ -0.58
STRADA-233	ENST00000638888	ERVK-7	P63135	1459 aa		11.45	□□□□□ -0.58
STRADA-233	ENST00000638888	SLC24A1	O60721	1099 aa		11.45	□□□□□ -0.58
STRADA-233	ENST00000638888	RRP1	P56182	461 aa	Known RBP	11.44	□□□□□ -0.58
STRADA-233	ENST00000638888	FAM69C	Q0P6D2	419 aa		11.44	□□□□□ -0.58
STRADA-233	ENST00000638888	NEO1	Q92859	1461 aa		11.44	□□□□□ -0.58
STRADA-233	ENST00000638888	NPAT	Q14207	1427 aa		11.43	□□□□□ -0.58
STRADA-233	ENST00000638888	DIP2B	Q9P265	1576 aa		11.43	□□□□□ -0.58
STRADA-233	ENST00000638888	ABCC3	O15438	1527 aa		11.43	□□□□□ -0.58
STRADA-233	ENST00000638888	PIK3C2B	O00750	1634 aa		11.42	□□□□□ -0.58
STRADA-233	ENST00000638888	ADGRF5	Q8IZF2	1346 aa		11.42	□□□□□ -0.58
STRADA-233	ENST00000638888	PPP2R1A	P30153	589 aa		11.42	□□□□□ -0.58
STRADA-233	ENST00000638888	RCAN3	Q9UKA8	241 aa		11.42	□□□□□ -0.58
STRADA-233	ENST00000638888	KNSTRN	Q9Y448	316 aa		11.42	□□□□□ -0.58
STRADA-233	ENST00000638888	CAMSAP1	Q5T5Y3	1602 aa		11.42	□□□□□ -0.58
STRADA-233	ENST00000638888	ADGRB1	O14514	1584 aa		11.41	□□□□□ -0.58
STRADA-233	ENST00000638888	SIGLEC1	Q9BZZ2	1709 aa		11.41	□□□□□ -0.58
STRADA-233	ENST00000638888	SENP3-EIF4A1	A0A087X0R7	540 aa		11.4	□□□□□ -0.58
STRADA-233	ENST00000638888	CFAP70	Q5T0N1	1121 aa		11.4	□□□□□ -0.58
STRADA-233	ENST00000638888	CCDC136	Q96JN2	1154 aa		11.4	□□□□□ -0.58
STRADA-233	ENST00000638888	RICTOR	Q6R327	1708 aa		11.4	□□□□□ -0.58
STRADA-233	ENST00000638888	NOS1	P29475	1434 aa		11.4	□□□□□ -0.58
STRADA-233	ENST00000638888	DIP2C	Q9Y2E4	1556 aa		11.4	□□□□□ -0.58
STRADA-233	ENST00000638888	CFAP65	Q6ZU64	1925 aa	Known RBP	11.4	□□□□□ -0.59
STRADA-233	ENST00000638888	TSPOAP1	O95153	1857 aa		11.39	□□□□□ -0.59
STRADA-233	ENST00000638888	QRICH2	Q9H0J4	1663 aa		11.39	□□□□□ -0.59
STRADA-233	ENST00000638888	CDCA7L	Q96GN5	454 aa		11.38	□□□□□ -0.59
STRADA-233	ENST00000638888	ADAMTS8	Q9UP79	889 aa		11.38	□□□□□ -0.59
STRADA-233	ENST00000638888	RPGRIP1L	Q68CZ1	1315 aa		11.38	□□□□□ -0.59
STRADA-233	ENST00000638888	ZNF521	Q96K83	1311 aa		11.38	□□□□□ -0.59
STRADA-233	ENST00000638888	ARHGAP31	Q2M1Z3	1444 aa		11.37	□□□□□ -0.59
STRADA-233	ENST00000638888	USP32	Q8NFA0	1604 aa		11.37	□□□□□ -0.59
STRADA-233	ENST00000638888	KDM4F	A0A1W2PPD8	638 aa		11.37	□□□□□ -0.59
STRADA-233	ENST00000638888	C14orf93	Q9H972	538 aa	Known RBP	11.36	□□□□□ -0.59
STRADA-233	ENST00000638888	NEXMIF	Q5QGS0	1516 aa		11.36	□□□□□ -0.59
STRADA-233	ENST00000638888	PLEKHH1	Q9ULM0	1364 aa		11.36	□□□□□ -0.59
STRADA-233	ENST00000638888	GLI2	P10070	1586 aa		11.36	□□□□□ -0.59
STRADA-233	ENST00000638888	ERICH6	Q7L0X2	663 aa		11.35	□□□□□ -0.59
STRADA-233	ENST00000638888	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.35	□□□□□ -0.59
STRADA-233	ENST00000638888	EXOC6	Q8TAG9	804 aa		11.35	□□□□□ -0.59
STRADA-233	ENST00000638888	SALL2	Q9Y467	1007 aa	Predicted RBP	11.35	□□□□□ -0.59
STRADA-233	ENST00000638888	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.34	□□□□□ -0.59
STRADA-233	ENST00000638888	WDR43	Q15061	677 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
STRADA-233	ENST00000638888	CARD14	Q9BXL6	1004 aa		11.34	□□□□□ -0.59
STRADA-233	ENST00000638888	SHPRH	Q149N8	1683 aa		11.33	□□□□□ -0.6
STRADA-233	ENST00000638888	DUSP27	Q5VZP5	1158 aa		11.32	□□□□□ -0.6
STRADA-233	ENST00000638888	PUS7	Q96PZ0	661 aa	Known RBP	11.32	□□□□□ -0.6
STRADA-233	ENST00000638888	POLR3A	O14802	1390 aa	Predicted RBP	11.32	□□□□□ -0.6
STRADA-233	ENST00000638888	ZFYVE9	O95405	1425 aa		11.32	□□□□□ -0.6
STRADA-233	ENST00000638888	GGT6	Q6P531	493 aa		11.32	□□□□□ -0.6
STRADA-233	ENST00000638888	TRMT2A	Q8IZ69	625 aa	Known RBP	11.31	□□□□□ -0.6
STRADA-233	ENST00000638888	PREX1	Q8TCU6	1659 aa		11.3	□□□□□ -0.6
STRADA-233	ENST00000638888	NGEF	Q8N5V2	710 aa		11.3	□□□□□ -0.6
STRADA-233	ENST00000638888	GOLGA2	Q08379	1002 aa		11.29	□□□□□ -0.6
STRADA-233	ENST00000638888	MYO5B	Q9ULV0	1848 aa		11.29	□□□□□ -0.6
STRADA-233	ENST00000638888	TULP4	Q9NRJ4	1543 aa		11.29	□□□□□ -0.6
STRADA-233	ENST00000638888	SLFN5	Q08AF3	891 aa		11.29	□□□□□ -0.6
STRADA-233	ENST00000638888	TMEM131L	A2VDJ0	1609 aa		11.29	□□□□□ -0.6
STRADA-233	ENST00000638888	NSD3	Q9BZ95	1437 aa		11.28	□□□□□ -0.6
STRADA-233	ENST00000638888	TCERG1	O14776	1098 aa	Known RBP	11.28	□□□□□ -0.6
STRADA-233	ENST00000638888	RAPGEF3	O95398	923 aa		11.28	□□□□□ -0.6
STRADA-233	ENST00000638888	CHGA	P10645	457 aa	Known RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms