RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-233ENST00000638888 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
STRADA-233ENST00000638888 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
STRADA-233ENST00000638888 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
STRADA-233ENST00000638888 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
STRADA-233ENST00000638888 DCAF1Q9Y4B6 1507 aa15.16■□□□□ 0.02
STRADA-233ENST00000638888 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
STRADA-233ENST00000638888 ABCC9O60706 1549 aa14.84□□□□□ -0.03
STRADA-233ENST00000638888 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
STRADA-233ENST00000638888 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
STRADA-233ENST00000638888 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
STRADA-233ENST00000638888 NACADO15069 1562 aa14.53□□□□□ -0.08
STRADA-233ENST00000638888 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
STRADA-233ENST00000638888 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
STRADA-233ENST00000638888 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
STRADA-233ENST00000638888 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
STRADA-233ENST00000638888 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
STRADA-233ENST00000638888 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
STRADA-233ENST00000638888 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
STRADA-233ENST00000638888 WIZO95785 1651 aa14.09□□□□□ -0.15
STRADA-233ENST00000638888 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
STRADA-233ENST00000638888 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
STRADA-233ENST00000638888 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
STRADA-233ENST00000638888 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
STRADA-233ENST00000638888 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
STRADA-233ENST00000638888 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
STRADA-233ENST00000638888 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
STRADA-233ENST00000638888 HRCP23327 699 aa13.9□□□□□ -0.18
STRADA-233ENST00000638888 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
STRADA-233ENST00000638888 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
STRADA-233ENST00000638888 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
STRADA-233ENST00000638888 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
STRADA-233ENST00000638888 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
STRADA-233ENST00000638888 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
STRADA-233ENST00000638888 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
STRADA-233ENST00000638888 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
STRADA-233ENST00000638888 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
STRADA-233ENST00000638888 EEA1Q15075 1411 aa13.58□□□□□ -0.24
STRADA-233ENST00000638888 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
STRADA-233ENST00000638888 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
STRADA-233ENST00000638888 SOGA1O94964 1423 aa13.51□□□□□ -0.25
STRADA-233ENST00000638888 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
STRADA-233ENST00000638888 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
STRADA-233ENST00000638888 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
STRADA-233ENST00000638888 TNIKQ9UKE5 1360 aa13.47□□□□□ -0.25
STRADA-233ENST00000638888 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
STRADA-233ENST00000638888 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
STRADA-233ENST00000638888 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
STRADA-233ENST00000638888 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
STRADA-233ENST00000638888 CSRNP3Q8WYN3 585 aa13.43□□□□□ -0.26
STRADA-233ENST00000638888 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
STRADA-233ENST00000638888 KIF21BO75037 1637 aa13.41□□□□□ -0.26
STRADA-233ENST00000638888 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
STRADA-233ENST00000638888 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
STRADA-233ENST00000638888 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
STRADA-233ENST00000638888 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
STRADA-233ENST00000638888 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
STRADA-233ENST00000638888 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
STRADA-233ENST00000638888 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
STRADA-233ENST00000638888 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
STRADA-233ENST00000638888 CFTRP13569 1480 aa13.25□□□□□ -0.29
STRADA-233ENST00000638888 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
STRADA-233ENST00000638888 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
STRADA-233ENST00000638888 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
STRADA-233ENST00000638888 CUX1P39880 1505 aa13.22□□□□□ -0.29
STRADA-233ENST00000638888 CLIP1P30622 1438 aa13.2□□□□□ -0.3
STRADA-233ENST00000638888 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
STRADA-233ENST00000638888 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
STRADA-233ENST00000638888 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
STRADA-233ENST00000638888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
STRADA-233ENST00000638888 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
STRADA-233ENST00000638888 CCER1Q8TC90 406 aaPredicted RBP13.08□□□□□ -0.32
STRADA-233ENST00000638888 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
STRADA-233ENST00000638888 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
STRADA-233ENST00000638888 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
STRADA-233ENST00000638888 CUX2O14529 1486 aa12.97□□□□□ -0.33
STRADA-233ENST00000638888 IGF1RP08069 1367 aa12.95□□□□□ -0.34
STRADA-233ENST00000638888 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
STRADA-233ENST00000638888 APLP2Q06481 763 aa12.95□□□□□ -0.34
STRADA-233ENST00000638888 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
STRADA-233ENST00000638888 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
STRADA-233ENST00000638888 NESP48681 1621 aa12.92□□□□□ -0.34
STRADA-233ENST00000638888 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
STRADA-233ENST00000638888 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
STRADA-233ENST00000638888 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
STRADA-233ENST00000638888 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
STRADA-233ENST00000638888 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
STRADA-233ENST00000638888 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
STRADA-233ENST00000638888 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
STRADA-233ENST00000638888 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
STRADA-233ENST00000638888 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
STRADA-233ENST00000638888 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
STRADA-233ENST00000638888 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
STRADA-233ENST00000638888 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
STRADA-233ENST00000638888 CUL7Q14999 1698 aa12.84□□□□□ -0.35
STRADA-233ENST00000638888 TIAM1Q13009 1591 aa12.83□□□□□ -0.36
STRADA-233ENST00000638888 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
STRADA-233ENST00000638888 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
STRADA-233ENST00000638888 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
STRADA-233ENST00000638888 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
STRADA-233ENST00000638888 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms