RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
DDX3X-221ENST00000630858 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
DDX3X-221ENST00000630858 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
DDX3X-221ENST00000630858 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
DDX3X-221ENST00000630858 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
DDX3X-221ENST00000630858 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
DDX3X-221ENST00000630858 RRP9O43818 475 aaKnown RBP12.62□□□□□ -0.39
DDX3X-221ENST00000630858 CLCN1P35523 988 aa12.62□□□□□ -0.39
DDX3X-221ENST00000630858 CROCC2H7BZ55 1655 aa12.62□□□□□ -0.39
DDX3X-221ENST00000630858 E9PCH4 1651 aa12.61□□□□□ -0.39
DDX3X-221ENST00000630858 DISP3Q9P2K9 1392 aa12.6□□□□□ -0.39
DDX3X-221ENST00000630858 SAMD9LQ8IVG5 1584 aa12.6□□□□□ -0.39
DDX3X-221ENST00000630858 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 ANTXR1Q9H6X2 564 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 SLFN5Q08AF3 891 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 COG6Q9Y2V7 657 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
DDX3X-221ENST00000630858 MCM4P33991 863 aa12.58□□□□□ -0.4
DDX3X-221ENST00000630858 TMF1P82094 1093 aa12.58□□□□□ -0.4
DDX3X-221ENST00000630858 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
DDX3X-221ENST00000630858 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
DDX3X-221ENST00000630858 PPP2R1AP30153 589 aa12.57□□□□□ -0.4
DDX3X-221ENST00000630858 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
DDX3X-221ENST00000630858 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
DDX3X-221ENST00000630858 INSRP06213 1382 aa12.57□□□□□ -0.4
DDX3X-221ENST00000630858 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
DDX3X-221ENST00000630858 APAF1O14727 1248 aa12.57□□□□□ -0.4
DDX3X-221ENST00000630858 TRAK2O60296 914 aa12.57□□□□□ -0.4
DDX3X-221ENST00000630858 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
DDX3X-221ENST00000630858 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
DDX3X-221ENST00000630858 FSD2A1L4K1 749 aa12.56□□□□□ -0.4
DDX3X-221ENST00000630858 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
DDX3X-221ENST00000630858 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
DDX3X-221ENST00000630858 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
DDX3X-221ENST00000630858 MRE11P49959 708 aa12.55□□□□□ -0.4
DDX3X-221ENST00000630858 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
DDX3X-221ENST00000630858 CGNL1Q0VF96 1302 aa12.55□□□□□ -0.4
DDX3X-221ENST00000630858 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
DDX3X-221ENST00000630858 TESK2Q96S53 571 aa12.55□□□□□ -0.4
DDX3X-221ENST00000630858 ESPNB1AK53 854 aa12.54□□□□□ -0.4
DDX3X-221ENST00000630858 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
DDX3X-221ENST00000630858 PLCH2O75038 1416 aa12.54□□□□□ -0.4
DDX3X-221ENST00000630858 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
DDX3X-221ENST00000630858 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
DDX3X-221ENST00000630858 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
DDX3X-221ENST00000630858 ERBINQ96RT1 1412 aa12.53□□□□□ -0.4
DDX3X-221ENST00000630858 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
DDX3X-221ENST00000630858 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
DDX3X-221ENST00000630858 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
DDX3X-221ENST00000630858 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
DDX3X-221ENST00000630858 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.4
DDX3X-221ENST00000630858 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.41
DDX3X-221ENST00000630858 CCDC144AA2RUR9 1427 aa12.51□□□□□ -0.41
DDX3X-221ENST00000630858 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
DDX3X-221ENST00000630858 E9PSI1 815 aa12.51□□□□□ -0.41
DDX3X-221ENST00000630858 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
DDX3X-221ENST00000630858 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
DDX3X-221ENST00000630858 CCDC141Q6ZP82 1450 aa12.51□□□□□ -0.41
DDX3X-221ENST00000630858 ABCA9Q8IUA7 1624 aa12.5□□□□□ -0.41
DDX3X-221ENST00000630858 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
DDX3X-221ENST00000630858 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
DDX3X-221ENST00000630858 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
DDX3X-221ENST00000630858 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
DDX3X-221ENST00000630858 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
DDX3X-221ENST00000630858 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
DDX3X-221ENST00000630858 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
DDX3X-221ENST00000630858 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
DDX3X-221ENST00000630858 PMFBP1Q8TBY8 1022 aa12.49□□□□□ -0.41
DDX3X-221ENST00000630858 TRMT2AQ8IZ69 625 aaKnown RBP12.48□□□□□ -0.41
DDX3X-221ENST00000630858 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
DDX3X-221ENST00000630858 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 ABCC1P33527 1531 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
DDX3X-221ENST00000630858 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX3X-221ENST00000630858 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.41
DDX3X-221ENST00000630858 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.41
DDX3X-221ENST00000630858 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
DDX3X-221ENST00000630858 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
DDX3X-221ENST00000630858 MAST1Q9Y2H9 1570 aa12.46□□□□□ -0.41
DDX3X-221ENST00000630858 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.42
DDX3X-221ENST00000630858 TNNQ9UQP3 1299 aa12.46□□□□□ -0.42
DDX3X-221ENST00000630858 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
DDX3X-221ENST00000630858 TPM2P07951 284 aa12.44□□□□□ -0.42
DDX3X-221ENST00000630858 MAGI2Q86UL8 1455 aa12.44□□□□□ -0.42
DDX3X-221ENST00000630858 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
DDX3X-221ENST00000630858 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
DDX3X-221ENST00000630858 RWDD1Q9H446 243 aaPredicted RBP12.44□□□□□ -0.42
DDX3X-221ENST00000630858 FANCAO15360 1455 aa12.43□□□□□ -0.42
DDX3X-221ENST00000630858 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
DDX3X-221ENST00000630858 RLBP1P12271 317 aa12.43□□□□□ -0.42
DDX3X-221ENST00000630858 RBM10P98175 930 aaKnown RBP12.42□□□□□ -0.42
DDX3X-221ENST00000630858 PDCL3Q9H2J4 239 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms