RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
CHD2-211ENST00000627460 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
CHD2-211ENST00000627460 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
CHD2-211ENST00000627460 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
CHD2-211ENST00000627460 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
CHD2-211ENST00000627460 NOS1P29475 1434 aa12.11□□□□□ -0.47
CHD2-211ENST00000627460 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
CHD2-211ENST00000627460 LAMC1P11047 1609 aa12.11□□□□□ -0.47
CHD2-211ENST00000627460 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
CHD2-211ENST00000627460 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
CHD2-211ENST00000627460 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
CHD2-211ENST00000627460 MYOM2P54296 1465 aa12.09□□□□□ -0.47
CHD2-211ENST00000627460 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
CHD2-211ENST00000627460 RGL3Q3MIN7 710 aa12.09□□□□□ -0.47
CHD2-211ENST00000627460 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
CHD2-211ENST00000627460 ZNF326Q5BKZ1 582 aaKnown RBP12.08□□□□□ -0.48
CHD2-211ENST00000627460 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
CHD2-211ENST00000627460 CARD11Q9BXL7 1154 aa12.08□□□□□ -0.48
CHD2-211ENST00000627460 KDM2AQ9Y2K7 1162 aa12.08□□□□□ -0.48
CHD2-211ENST00000627460 TRPM1Q7Z4N2 1603 aa12.08□□□□□ -0.48
CHD2-211ENST00000627460 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 ADGRB3O60242 1522 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
CHD2-211ENST00000627460 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 KIAA1210Q9ULL0 1709 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 PIK3C2BO00750 1634 aa12.07□□□□□ -0.48
CHD2-211ENST00000627460 USP47Q96K76 1375 aa12.06□□□□□ -0.48
CHD2-211ENST00000627460 PREX1Q8TCU6 1659 aa12.06□□□□□ -0.48
CHD2-211ENST00000627460 MROH2AA6NES4 1674 aa12.04□□□□□ -0.48
CHD2-211ENST00000627460 POLR1AO95602 1720 aaPredicted RBP12.04□□□□□ -0.48
CHD2-211ENST00000627460 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
CHD2-211ENST00000627460 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
CHD2-211ENST00000627460 ERVK-7P63135 1459 aa12.03□□□□□ -0.48
CHD2-211ENST00000627460 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
CHD2-211ENST00000627460 SPATA31D1Q6ZQQ2 1576 aa12.03□□□□□ -0.48
CHD2-211ENST00000627460 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
CHD2-211ENST00000627460 IFT172Q9UG01 1749 aa12.03□□□□□ -0.48
CHD2-211ENST00000627460 SYNMO15061 1565 aa12.02□□□□□ -0.49
CHD2-211ENST00000627460 ZFYVE9O95405 1425 aa12.02□□□□□ -0.49
CHD2-211ENST00000627460 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
CHD2-211ENST00000627460 SIGLEC1Q9BZZ2 1709 aa12□□□□□ -0.49
CHD2-211ENST00000627460 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
CHD2-211ENST00000627460 HDGFP51858 240 aaKnown RBP12□□□□□ -0.49
CHD2-211ENST00000627460 UGGT1Q9NYU2 1555 aa12□□□□□ -0.49
CHD2-211ENST00000627460 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
CHD2-211ENST00000627460 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
CHD2-211ENST00000627460 CCDC7Q96M83 1385 aa11.99□□□□□ -0.49
CHD2-211ENST00000627460 SETBP1Q9Y6X0 1596 aa11.99□□□□□ -0.49
CHD2-211ENST00000627460 PPLO60437 1756 aa11.99□□□□□ -0.49
CHD2-211ENST00000627460 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
CHD2-211ENST00000627460 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
CHD2-211ENST00000627460 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
CHD2-211ENST00000627460 ANP32CO43423 234 aa11.97□□□□□ -0.49
CHD2-211ENST00000627460 DDX10Q13206 875 aaKnown RBP11.97□□□□□ -0.49
CHD2-211ENST00000627460 IDI1Q13907 227 aa11.97□□□□□ -0.49
CHD2-211ENST00000627460 MLECQ14165 292 aa11.97□□□□□ -0.49
CHD2-211ENST00000627460 TMEM131LA2VDJ0 1609 aa11.97□□□□□ -0.49
CHD2-211ENST00000627460 PIK3C2GO75747 1445 aa11.96□□□□□ -0.49
CHD2-211ENST00000627460 CFAP65Q6ZU64 1925 aaKnown RBP11.96□□□□□ -0.49
CHD2-211ENST00000627460 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
CHD2-211ENST00000627460 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHD2-211ENST00000627460 TMF1P82094 1093 aa11.95□□□□□ -0.5
CHD2-211ENST00000627460 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
CHD2-211ENST00000627460 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
CHD2-211ENST00000627460 NEXMIFQ5QGS0 1516 aa11.95□□□□□ -0.5
CHD2-211ENST00000627460 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
CHD2-211ENST00000627460 TNRQ92752 1358 aa11.94□□□□□ -0.5
CHD2-211ENST00000627460 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
CHD2-211ENST00000627460 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
CHD2-211ENST00000627460 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
CHD2-211ENST00000627460 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
CHD2-211ENST00000627460 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
CHD2-211ENST00000627460 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
CHD2-211ENST00000627460 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
CHD2-211ENST00000627460 MIER1Q8N108 512 aa11.92□□□□□ -0.5
CHD2-211ENST00000627460 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
CHD2-211ENST00000627460 CCER2I3L3R5 266 aa11.91□□□□□ -0.5
CHD2-211ENST00000627460 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
CHD2-211ENST00000627460 A2ML1A8K2U0 1454 aa11.9□□□□□ -0.5
CHD2-211ENST00000627460 CFAP70Q5T0N1 1121 aa11.89□□□□□ -0.51
CHD2-211ENST00000627460 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
CHD2-211ENST00000627460 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
CHD2-211ENST00000627460 CENPBP07199 599 aaPredicted RBP11.88□□□□□ -0.51
CHD2-211ENST00000627460 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
CHD2-211ENST00000627460 C3P01024 1663 aa11.87□□□□□ -0.51
CHD2-211ENST00000627460 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
CHD2-211ENST00000627460 PUS7Q96PZ0 661 aaKnown RBP11.86□□□□□ -0.51
CHD2-211ENST00000627460 TESK2Q96S53 571 aa11.86□□□□□ -0.51
CHD2-211ENST00000627460 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
CHD2-211ENST00000627460 MYO5BQ9ULV0 1848 aa11.86□□□□□ -0.51
CHD2-211ENST00000627460 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
CHD2-211ENST00000627460 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
CHD2-211ENST00000627460 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
CHD2-211ENST00000627460 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
CHD2-211ENST00000627460 THEMISQ8N1K5 641 aaPredicted RBP11.84□□□□□ -0.51
CHD2-211ENST00000627460 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
CHD2-211ENST00000627460 EID1Q9Y6B2 187 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms