RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
C9orf139-202ENST00000623196 RSPH4AQ5TD94 716 aa18.32■□□□□ 0.52
C9orf139-202ENST00000623196 FAM184AQ8NB25 1140 aa18.32■□□□□ 0.52
C9orf139-202ENST00000623196 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
C9orf139-202ENST00000623196 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
C9orf139-202ENST00000623196 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.52
C9orf139-202ENST00000623196 TSR1Q2NL82 804 aaKnown RBP18.31■□□□□ 0.52
C9orf139-202ENST00000623196 GPS2Q13227 327 aa18.31■□□□□ 0.52
C9orf139-202ENST00000623196 MSH5O43196 834 aa18.31■□□□□ 0.52
C9orf139-202ENST00000623196 CCAR2Q8N163 923 aaKnown RBP18.3■□□□□ 0.52
C9orf139-202ENST00000623196 FOXD4L6Q3SYB3 417 aaPredicted RBP18.3■□□□□ 0.52
C9orf139-202ENST00000623196 FOXD4L3Q6VB84 417 aaPredicted RBP18.3■□□□□ 0.52
C9orf139-202ENST00000623196 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
C9orf139-202ENST00000623196 C11orf95C9JLR9 678 aaPredicted RBP18.29■□□□□ 0.52
C9orf139-202ENST00000623196 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
C9orf139-202ENST00000623196 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
C9orf139-202ENST00000623196 REC8O95072 547 aa18.29■□□□□ 0.52
C9orf139-202ENST00000623196 PDE4CQ08493 712 aa18.29■□□□□ 0.52
C9orf139-202ENST00000623196 AMPHP49418 695 aa18.28■□□□□ 0.52
C9orf139-202ENST00000623196 TPD52L1Q16890 204 aaPredicted RBP18.28■□□□□ 0.52
C9orf139-202ENST00000623196 TPM1P09493 284 aa18.28■□□□□ 0.52
C9orf139-202ENST00000623196 SETQ01105 290 aaPredicted RBP18.28■□□□□ 0.52
C9orf139-202ENST00000623196 ANKRD50Q9ULJ7 1429 aa18.27■□□□□ 0.52
C9orf139-202ENST00000623196 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
C9orf139-202ENST00000623196 NGDNQ8NEJ9 315 aaKnown RBP18.26■□□□□ 0.51
C9orf139-202ENST00000623196 MARCH6O60337 910 aa18.25■□□□□ 0.51
C9orf139-202ENST00000623196 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
C9orf139-202ENST00000623196 ZNF771Q7L3S4 317 aaPredicted RBP18.25■□□□□ 0.51
C9orf139-202ENST00000623196 FAM13BQ9NYF5 915 aa18.25■□□□□ 0.51
C9orf139-202ENST00000623196 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
C9orf139-202ENST00000623196 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
C9orf139-202ENST00000623196 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
C9orf139-202ENST00000623196 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
C9orf139-202ENST00000623196 NAIPQ13075 1403 aa18.24■□□□□ 0.51
C9orf139-202ENST00000623196 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
C9orf139-202ENST00000623196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
C9orf139-202ENST00000623196 ZNF592Q92610 1267 aa18.24■□□□□ 0.51
C9orf139-202ENST00000623196 TMX4Q9H1E5 349 aaPredicted RBP18.24■□□□□ 0.51
C9orf139-202ENST00000623196 DIAPH3Q9NSV4 1193 aa18.24■□□□□ 0.51
C9orf139-202ENST00000623196 NESP48681 1621 aa18.24■□□□□ 0.51
C9orf139-202ENST00000623196 CCDC70Q6NSX1 233 aa18.23■□□□□ 0.51
C9orf139-202ENST00000623196 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
C9orf139-202ENST00000623196 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
C9orf139-202ENST00000623196 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
C9orf139-202ENST00000623196 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
C9orf139-202ENST00000623196 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.22■□□□□ 0.51
C9orf139-202ENST00000623196 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
C9orf139-202ENST00000623196 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
C9orf139-202ENST00000623196 PTPRGP23470 1445 aa18.21■□□□□ 0.51
C9orf139-202ENST00000623196 LTV1Q96GA3 475 aaPredicted RBP18.21■□□□□ 0.51
C9orf139-202ENST00000623196 IPO7O95373 1038 aaKnown RBP18.21■□□□□ 0.51
C9orf139-202ENST00000623196 AKAP17AQ02040 695 aaKnown RBP18.21■□□□□ 0.51
C9orf139-202ENST00000623196 PCF11O94913 1555 aaKnown RBP18.2■□□□□ 0.5
C9orf139-202ENST00000623196 NUCB2P80303 420 aa18.2■□□□□ 0.5
C9orf139-202ENST00000623196 NFKBIBQ15653 356 aa18.2■□□□□ 0.5
C9orf139-202ENST00000623196 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
C9orf139-202ENST00000623196 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
C9orf139-202ENST00000623196 TPM2P07951 284 aa18.18■□□□□ 0.5
C9orf139-202ENST00000623196 DZIP1LQ8IYY4 767 aaKnown RBP18.18■□□□□ 0.5
C9orf139-202ENST00000623196 LRRFIP1Q32MZ4 808 aaKnown RBP18.18■□□□□ 0.5
C9orf139-202ENST00000623196 TEX35Q5T0J7 233 aa18.18■□□□□ 0.5
C9orf139-202ENST00000623196 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
C9orf139-202ENST00000623196 HOMER1Q86YM7 354 aa18.17■□□□□ 0.5
C9orf139-202ENST00000623196 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
C9orf139-202ENST00000623196 WASHC2CQ9Y4E1 1318 aa18.17■□□□□ 0.5
C9orf139-202ENST00000623196 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
C9orf139-202ENST00000623196 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
C9orf139-202ENST00000623196 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
C9orf139-202ENST00000623196 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
C9orf139-202ENST00000623196 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
C9orf139-202ENST00000623196 SMG6Q86US8 1419 aaKnown RBP18.16■□□□□ 0.5
C9orf139-202ENST00000623196 PRM3Q9NNZ6 103 aa18.15■□□□□ 0.5
C9orf139-202ENST00000623196 ANKRD20A12PQ8NF67 263 aa18.15■□□□□ 0.5
C9orf139-202ENST00000623196 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
C9orf139-202ENST00000623196 ANO2Q9NQ90 1003 aa18.14■□□□□ 0.49
C9orf139-202ENST00000623196 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
C9orf139-202ENST00000623196 VPS53Q5VIR6 699 aa18.14■□□□□ 0.49
C9orf139-202ENST00000623196 CPLX1O14810 134 aa18.13■□□□□ 0.49
C9orf139-202ENST00000623196 TRIM29Q14134 588 aa18.13■□□□□ 0.49
C9orf139-202ENST00000623196 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
C9orf139-202ENST00000623196 COG3Q96JB2 828 aa18.13■□□□□ 0.49
C9orf139-202ENST00000623196 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
C9orf139-202ENST00000623196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.13■□□□□ 0.49
C9orf139-202ENST00000623196 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
C9orf139-202ENST00000623196 RNF20Q5VTR2 975 aa18.13■□□□□ 0.49
C9orf139-202ENST00000623196 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 MRE11P49959 708 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 TEFQ10587 303 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 KIAA1107Q9UPP5 1409 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 G3V3G9 751 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 IL27Q8NEV9 243 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 C22orf23Q9BZE7 217 aa18.12■□□□□ 0.49
C9orf139-202ENST00000623196 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
C9orf139-202ENST00000623196 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
C9orf139-202ENST00000623196 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
C9orf139-202ENST00000623196 VPS37CA5D8V6 355 aaPredicted RBP18.11■□□□□ 0.49
C9orf139-202ENST00000623196 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms