RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SCAF11Q99590 1463 aaKnown RBP28.84■■■□□ 2.21
PDLIM2-221ENST00000622702 MED14O60244 1454 aa28.83■■■□□ 2.21
PDLIM2-221ENST00000622702 NPHP4O75161 1426 aaPredicted RBP28.82■■■□□ 2.2
PDLIM2-221ENST00000622702 IQGAP1P46940 1657 aa28.79■■■□□ 2.2
PDLIM2-221ENST00000622702 SPATA31E1Q6ZUB1 1445 aa28.79■■■□□ 2.2
PDLIM2-221ENST00000622702 KIF1BO60333 1816 aa28.78■■■□□ 2.2
PDLIM2-221ENST00000622702 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
PDLIM2-221ENST00000622702 RIMS2Q9UQ26 1411 aa28.77■■■□□ 2.2
PDLIM2-221ENST00000622702 ZFYVE9O95405 1425 aa28.76■■■□□ 2.2
PDLIM2-221ENST00000622702 HDGFP51858 240 aaKnown RBP28.74■■■□□ 2.19
PDLIM2-221ENST00000622702 ZNF326Q5BKZ1 582 aaKnown RBP28.73■■■□□ 2.19
PDLIM2-221ENST00000622702 PPP1R15AO75807 674 aaPredicted RBP28.72■■■□□ 2.19
PDLIM2-221ENST00000622702 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.71■■■□□ 2.19
PDLIM2-221ENST00000622702 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
PDLIM2-221ENST00000622702 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
PDLIM2-221ENST00000622702 BCANQ96GW7 911 aa28.67■■■□□ 2.18
PDLIM2-221ENST00000622702 SENP3Q9H4L4 574 aaPredicted RBP28.67■■■□□ 2.18
PDLIM2-221ENST00000622702 TIMELESSQ9UNS1 1208 aa28.67■■■□□ 2.18
PDLIM2-221ENST00000622702 RGL3Q3MIN7 710 aa28.66■■■□□ 2.18
PDLIM2-221ENST00000622702 TONSLQ96HA7 1378 aa28.66■■■□□ 2.18
PDLIM2-221ENST00000622702 PLEKHG1Q9ULL1 1385 aa28.65■■■□□ 2.18
PDLIM2-221ENST00000622702 RPGRIP1LQ68CZ1 1315 aa28.65■■■□□ 2.18
PDLIM2-221ENST00000622702 LTBP4Q8N2S1 1624 aa28.64■■■□□ 2.18
PDLIM2-221ENST00000622702 NEXMIFQ5QGS0 1516 aa28.63■■■□□ 2.17
PDLIM2-221ENST00000622702 L3MBTL2Q969R5 705 aa28.62■■■□□ 2.17
PDLIM2-221ENST00000622702 SLC26A8Q96RN1 970 aa28.62■■■□□ 2.17
PDLIM2-221ENST00000622702 CERKQ8TCT0 537 aa28.59■■■□□ 2.17
PDLIM2-221ENST00000622702 STAC3Q96MF2 364 aa28.58■■■□□ 2.17
PDLIM2-221ENST00000622702 IFT172Q9UG01 1749 aa28.57■■■□□ 2.16
PDLIM2-221ENST00000622702 PPLO60437 1756 aa28.56■■■□□ 2.16
PDLIM2-221ENST00000622702 DCAF11Q8TEB1 546 aa28.55■■■□□ 2.16
PDLIM2-221ENST00000622702 MYOM2P54296 1465 aa28.54■■■□□ 2.16
PDLIM2-221ENST00000622702 STRCP1A6NGW2 1772 aa28.53■■■□□ 2.16
PDLIM2-221ENST00000622702 VGFO15240 615 aaPredicted RBP28.53■■■□□ 2.16
PDLIM2-221ENST00000622702 ADAMTS13Q76LX8 1427 aa28.52■■■□□ 2.16
PDLIM2-221ENST00000622702 CPS1P31327 1500 aa28.51■■■□□ 2.15
PDLIM2-221ENST00000622702 TBX22Q9Y458 520 aa28.51■■■□□ 2.15
PDLIM2-221ENST00000622702 SETBP1Q9Y6X0 1596 aa28.49■■■□□ 2.15
PDLIM2-221ENST00000622702 NRXN3Q9Y4C0 1643 aa28.49■■■□□ 2.15
PDLIM2-221ENST00000622702 KDM2AQ9Y2K7 1162 aa28.49■■■□□ 2.15
PDLIM2-221ENST00000622702 DIP2AQ14689 1571 aa28.49■■■□□ 2.15
PDLIM2-221ENST00000622702 NRXN1Q9ULB1 1477 aa28.48■■■□□ 2.15
PDLIM2-221ENST00000622702 ZEB1P37275 1124 aaPredicted RBP28.46■■■□□ 2.15
PDLIM2-221ENST00000622702 ADGRF5Q8IZF2 1346 aa28.46■■■□□ 2.15
PDLIM2-221ENST00000622702 KCNA6P17658 529 aa28.45■■■□□ 2.14
PDLIM2-221ENST00000622702 PRAG1Q86YV5 1406 aa28.44■■■□□ 2.14
PDLIM2-221ENST00000622702 CHD2O14647 1828 aaKnown RBP28.43■■■□□ 2.14
PDLIM2-221ENST00000622702 PIK3C2GO75747 1445 aa28.42■■■□□ 2.14
PDLIM2-221ENST00000622702 IQSEC2Q5JU85 1478 aa28.42■■■□□ 2.14
PDLIM2-221ENST00000622702 LRRC7Q96NW7 1537 aa28.41■■■□□ 2.14
PDLIM2-221ENST00000622702 NWD1Q149M9 1564 aa28.4■■■□□ 2.14
PDLIM2-221ENST00000622702 PIK3R4Q99570 1358 aa28.4■■■□□ 2.14
PDLIM2-221ENST00000622702 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
PDLIM2-221ENST00000622702 METP08581 1390 aa28.37■■■□□ 2.13
PDLIM2-221ENST00000622702 ALKQ9UM73 1620 aa28.36■■■□□ 2.13
PDLIM2-221ENST00000622702 FBXO41Q8TF61 875 aa28.35■■■□□ 2.13
PDLIM2-221ENST00000622702 NKTRP30414 1462 aaKnown RBP28.35■■■□□ 2.13
PDLIM2-221ENST00000622702 PROSER2Q86WR7 435 aaPredicted RBP28.34■■■□□ 2.13
PDLIM2-221ENST00000622702 SETD1AO15047 1707 aaKnown RBP28.34■■■□□ 2.13
PDLIM2-221ENST00000622702 PTPRUQ92729 1446 aa28.34■■■□□ 2.13
PDLIM2-221ENST00000622702 AMOTL2Q9Y2J4 779 aa28.34■■■□□ 2.13
PDLIM2-221ENST00000622702 C14orf93Q9H972 538 aaKnown RBP28.33■■■□□ 2.13
PDLIM2-221ENST00000622702 XIRP1Q702N8 1843 aaKnown RBP28.32■■■□□ 2.12
PDLIM2-221ENST00000622702 KIAA1210Q9ULL0 1709 aa28.31■■■□□ 2.12
PDLIM2-221ENST00000622702 RBM33Q96EV2 1170 aaKnown RBP28.31■■■□□ 2.12
PDLIM2-221ENST00000622702 LAMC1P11047 1609 aa28.3■■■□□ 2.12
PDLIM2-221ENST00000622702 TMEM94Q12767 1356 aa28.3■■■□□ 2.12
PDLIM2-221ENST00000622702 CFAP70Q5T0N1 1121 aa28.29■■■□□ 2.12
PDLIM2-221ENST00000622702 RALGAPBQ86X10 1494 aa28.29■■■□□ 2.12
PDLIM2-221ENST00000622702 TRPM1Q7Z4N2 1603 aa28.29■■■□□ 2.12
PDLIM2-221ENST00000622702 ILDR1Q86SU0 546 aaPredicted RBP28.28■■■□□ 2.12
PDLIM2-221ENST00000622702 XRN1Q8IZH2 1706 aaKnown RBP28.28■■■□□ 2.12
PDLIM2-221ENST00000622702 UBAP1LF5GYI3 381 aa28.27■■■□□ 2.12
PDLIM2-221ENST00000622702 GPRASP1Q5JY77 1395 aa28.22■■■□□ 2.11
PDLIM2-221ENST00000622702 ADGRB1O14514 1584 aa28.21■■■□□ 2.11
PDLIM2-221ENST00000622702 NBPF1Q3BBV0 1214 aa28.21■■■□□ 2.11
PDLIM2-221ENST00000622702 ROCK2O75116 1388 aaKnown RBP28.21■■■□□ 2.11
PDLIM2-221ENST00000622702 TMEM132EQ6IEE7 984 aa28.21■■■□□ 2.11
PDLIM2-221ENST00000622702 ASXL1Q8IXJ9 1541 aa28.2■■■□□ 2.1
PDLIM2-221ENST00000622702 TOM1O60784 492 aa28.2■■■□□ 2.1
PDLIM2-221ENST00000622702 C14orf37Q86TY3 774 aa28.18■■■□□ 2.1
PDLIM2-221ENST00000622702 NCOA3Q9Y6Q9 1424 aa28.17■■■□□ 2.1
PDLIM2-221ENST00000622702 STK26Q9P289 416 aa28.16■■■□□ 2.1
PDLIM2-221ENST00000622702 MSH6P52701 1360 aa28.16■■■□□ 2.1
PDLIM2-221ENST00000622702 ROBO2Q9HCK4 1378 aa28.14■■■□□ 2.1
PDLIM2-221ENST00000622702 PTCH1Q13635 1447 aa28.14■■■□□ 2.09
PDLIM2-221ENST00000622702 CARD11Q9BXL7 1154 aa28.14■■■□□ 2.09
PDLIM2-221ENST00000622702 LRPPRCP42704 1394 aaKnown RBP28.13■■■□□ 2.09
PDLIM2-221ENST00000622702 PIP4K2BP78356 416 aa28.13■■■□□ 2.09
PDLIM2-221ENST00000622702 YTHDC2Q9H6S0 1430 aaKnown RBP28.12■■■□□ 2.09
PDLIM2-221ENST00000622702 SCAF1Q9H7N4 1312 aaKnown RBP28.11■■■□□ 2.09
PDLIM2-221ENST00000622702 ABCC11Q96J66 1382 aa28.09■■■□□ 2.09
PDLIM2-221ENST00000622702 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
PDLIM2-221ENST00000622702 KNDC1Q76NI1 1749 aa28.09■■■□□ 2.09
PDLIM2-221ENST00000622702 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.09■■■□□ 2.09
PDLIM2-221ENST00000622702 TECPR2O15040 1411 aa28.08■■■□□ 2.09
PDLIM2-221ENST00000622702 NALCNQ8IZF0 1738 aa28.05■■■□□ 2.08
PDLIM2-221ENST00000622702 ATF3P18847 181 aa28.04■■■□□ 2.08
PDLIM2-221ENST00000622702 WAPLQ7Z5K2 1190 aa28.04■■■□□ 2.08
PDLIM2-221ENST00000622702 ADGRL3Q9HAR2 1447 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms