RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 MYOM2P54296 1465 aa23.59■■□□□ 1.37
TRA2A-212ENST00000621813 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
TRA2A-212ENST00000621813 FRMPD1Q5SYB0 1578 aa23.59■■□□□ 1.37
TRA2A-212ENST00000621813 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.37
TRA2A-212ENST00000621813 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.36
TRA2A-212ENST00000621813 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.36
TRA2A-212ENST00000621813 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
TRA2A-212ENST00000621813 MAP3K4Q9Y6R4 1608 aa23.57■■□□□ 1.36
TRA2A-212ENST00000621813 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
TRA2A-212ENST00000621813 DISP3Q9P2K9 1392 aa23.56■■□□□ 1.36
TRA2A-212ENST00000621813 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
TRA2A-212ENST00000621813 RTL5Q5HYW3 569 aaPredicted RBP23.55■■□□□ 1.36
TRA2A-212ENST00000621813 TMC1Q8TDI8 760 aa23.53■■□□□ 1.36
TRA2A-212ENST00000621813 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.53■■□□□ 1.36
TRA2A-212ENST00000621813 EIF3AQ14152 1382 aaKnown RBP23.52■■□□□ 1.36
TRA2A-212ENST00000621813 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
TRA2A-212ENST00000621813 GLI2P10070 1586 aa23.52■■□□□ 1.36
TRA2A-212ENST00000621813 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
TRA2A-212ENST00000621813 RICTORQ6R327 1708 aa23.51■■□□□ 1.35
TRA2A-212ENST00000621813 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
TRA2A-212ENST00000621813 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
TRA2A-212ENST00000621813 ADGRB3O60242 1522 aa23.5■■□□□ 1.35
TRA2A-212ENST00000621813 PER1O15534 1290 aaPredicted RBP23.49■■□□□ 1.35
TRA2A-212ENST00000621813 CDCA8Q53HL2 280 aa23.49■■□□□ 1.35
TRA2A-212ENST00000621813 IL27Q8NEV9 243 aa23.48■■□□□ 1.35
TRA2A-212ENST00000621813 LRPPRCP42704 1394 aaKnown RBP23.48■■□□□ 1.35
TRA2A-212ENST00000621813 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
TRA2A-212ENST00000621813 ABCC3O15438 1527 aa23.47■■□□□ 1.35
TRA2A-212ENST00000621813 NRXN1Q9ULB1 1477 aa23.47■■□□□ 1.35
TRA2A-212ENST00000621813 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
TRA2A-212ENST00000621813 GLIPR1L2Q4G1C9 344 aa23.47■■□□□ 1.35
TRA2A-212ENST00000621813 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
TRA2A-212ENST00000621813 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
TRA2A-212ENST00000621813 CAMSAP1Q5T5Y3 1602 aa23.46■■□□□ 1.35
TRA2A-212ENST00000621813 SYNMO15061 1565 aa23.46■■□□□ 1.35
TRA2A-212ENST00000621813 NPATQ14207 1427 aa23.46■■□□□ 1.35
TRA2A-212ENST00000621813 PPLO60437 1756 aa23.43■■□□□ 1.34
TRA2A-212ENST00000621813 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
TRA2A-212ENST00000621813 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
TRA2A-212ENST00000621813 PANK3Q9H999 370 aa23.41■■□□□ 1.34
TRA2A-212ENST00000621813 KDM5AP29375 1690 aaKnown RBP23.41■■□□□ 1.34
TRA2A-212ENST00000621813 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
TRA2A-212ENST00000621813 MYO3AQ8NEV4 1616 aa23.4■■□□□ 1.34
TRA2A-212ENST00000621813 GGT6Q6P531 493 aa23.4■■□□□ 1.34
TRA2A-212ENST00000621813 ZMYM4Q5VZL5 1548 aa23.4■■□□□ 1.34
TRA2A-212ENST00000621813 CFAP65Q6ZU64 1925 aaKnown RBP23.38■■□□□ 1.33
TRA2A-212ENST00000621813 INSRP06213 1382 aa23.38■■□□□ 1.33
TRA2A-212ENST00000621813 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
TRA2A-212ENST00000621813 NBR1Q14596 966 aa23.38■■□□□ 1.33
TRA2A-212ENST00000621813 DIP2BQ9P265 1576 aa23.38■■□□□ 1.33
TRA2A-212ENST00000621813 PIK3C2BO00750 1634 aa23.38■■□□□ 1.33
TRA2A-212ENST00000621813 MYOM1P52179 1685 aa23.37■■□□□ 1.33
TRA2A-212ENST00000621813 NOS1P29475 1434 aa23.37■■□□□ 1.33
TRA2A-212ENST00000621813 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
TRA2A-212ENST00000621813 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
TRA2A-212ENST00000621813 ADGRF5Q8IZF2 1346 aa23.37■■□□□ 1.33
TRA2A-212ENST00000621813 SIGLEC1Q9BZZ2 1709 aa23.34■■□□□ 1.33
TRA2A-212ENST00000621813 FAM69CQ0P6D2 419 aa23.34■■□□□ 1.33
TRA2A-212ENST00000621813 CFAP70Q5T0N1 1121 aa23.33■■□□□ 1.33
TRA2A-212ENST00000621813 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
TRA2A-212ENST00000621813 SBNO2Q9Y2G9 1366 aa23.33■■□□□ 1.33
TRA2A-212ENST00000621813 RSPH6AQ9H0K4 717 aa23.33■■□□□ 1.32
TRA2A-212ENST00000621813 PIK3C2GO75747 1445 aa23.33■■□□□ 1.32
TRA2A-212ENST00000621813 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
TRA2A-212ENST00000621813 KNSTRNQ9Y448 316 aa23.31■■□□□ 1.32
TRA2A-212ENST00000621813 ASXL1Q8IXJ9 1541 aa23.3■■□□□ 1.32
TRA2A-212ENST00000621813 NPC1L1Q9UHC9 1359 aa23.3■■□□□ 1.32
TRA2A-212ENST00000621813 RTN4Q9NQC3 1192 aaKnown RBP23.29■■□□□ 1.32
TRA2A-212ENST00000621813 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
TRA2A-212ENST00000621813 ERVK-7P63135 1459 aa23.28■■□□□ 1.32
TRA2A-212ENST00000621813 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
TRA2A-212ENST00000621813 YEATS2Q9ULM3 1422 aa23.27■■□□□ 1.32
TRA2A-212ENST00000621813 PPP4R2Q9NY27 417 aa23.25■■□□□ 1.31
TRA2A-212ENST00000621813 C14orf93Q9H972 538 aaKnown RBP23.25■■□□□ 1.31
TRA2A-212ENST00000621813 ADGRB1O14514 1584 aa23.24■■□□□ 1.31
TRA2A-212ENST00000621813 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
TRA2A-212ENST00000621813 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
TRA2A-212ENST00000621813 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
TRA2A-212ENST00000621813 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
TRA2A-212ENST00000621813 AMER1Q5JTC6 1135 aaPredicted RBP23.23■■□□□ 1.31
TRA2A-212ENST00000621813 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
TRA2A-212ENST00000621813 QRICH2Q9H0J4 1663 aa23.23■■□□□ 1.31
TRA2A-212ENST00000621813 PDE3BQ13370 1112 aa23.22■■□□□ 1.31
TRA2A-212ENST00000621813 RNF123Q5XPI4 1314 aa23.22■■□□□ 1.31
TRA2A-212ENST00000621813 KIF13AQ9H1H9 1805 aa23.22■■□□□ 1.31
TRA2A-212ENST00000621813 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
TRA2A-212ENST00000621813 SLC52A1Q9NWF4 448 aa23.21■■□□□ 1.31
TRA2A-212ENST00000621813 CENPJQ9HC77 1338 aaPredicted RBP23.21■■□□□ 1.31
TRA2A-212ENST00000621813 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
TRA2A-212ENST00000621813 ZFYVE9O95405 1425 aa23.19■■□□□ 1.3
TRA2A-212ENST00000621813 TSPOAP1O95153 1857 aa23.19■■□□□ 1.3
TRA2A-212ENST00000621813 AGLP35573 1532 aa23.17■■□□□ 1.3
TRA2A-212ENST00000621813 PAK3O75914 559 aaPredicted RBP23.16■■□□□ 1.3
TRA2A-212ENST00000621813 PPP2R1AP30153 589 aa23.16■■□□□ 1.3
TRA2A-212ENST00000621813 IPO9Q96P70 1041 aaKnown RBP23.16■■□□□ 1.3
TRA2A-212ENST00000621813 ANP32AP39687 249 aaKnown RBP23.15■■□□□ 1.3
TRA2A-212ENST00000621813 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.3
TRA2A-212ENST00000621813 TMEM131LA2VDJ0 1609 aa23.14■■□□□ 1.3
TRA2A-212ENST00000621813 ARHGEF28Q8N1W1 1705 aaKnown RBP23.14■■□□□ 1.3
TRA2A-212ENST00000621813 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms