RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
COL4A6-210ENST00000621266 TPM2P07951 284 aa12.12□□□□□ -0.47
COL4A6-210ENST00000621266 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
COL4A6-210ENST00000621266 AMPHP49418 695 aa12.11□□□□□ -0.47
COL4A6-210ENST00000621266 MTERF4Q7Z6M4 381 aaKnown RBP12.11□□□□□ -0.47
COL4A6-210ENST00000621266 CCDC146Q8IYE0 955 aa12.11□□□□□ -0.47
COL4A6-210ENST00000621266 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
COL4A6-210ENST00000621266 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
COL4A6-210ENST00000621266 PCMTD1Q96MG8 357 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-210ENST00000621266 RALBP1Q15311 655 aa12.11□□□□□ -0.47
COL4A6-210ENST00000621266 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
COL4A6-210ENST00000621266 PLIN1O60240 522 aa12.1□□□□□ -0.47
COL4A6-210ENST00000621266 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
COL4A6-210ENST00000621266 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-210ENST00000621266 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-210ENST00000621266 NFKBIBQ15653 356 aa12.1□□□□□ -0.47
COL4A6-210ENST00000621266 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-210ENST00000621266 DHX37Q8IY37 1157 aaKnown RBP12.1□□□□□ -0.47
COL4A6-210ENST00000621266 U2AF1L5P0DN76 240 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-210ENST00000621266 U2AF1Q01081 240 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A6-210ENST00000621266 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 L3MBTL2Q969R5 705 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 ACBD3Q9H3P7 528 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 SLC4A10Q6U841 1118 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-210ENST00000621266 EXOC6Q8TAG9 804 aa12.09□□□□□ -0.47
COL4A6-210ENST00000621266 ATF3P18847 181 aa12.08□□□□□ -0.47
COL4A6-210ENST00000621266 KIF3AQ9Y496 699 aa12.08□□□□□ -0.47
COL4A6-210ENST00000621266 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
COL4A6-210ENST00000621266 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
COL4A6-210ENST00000621266 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
COL4A6-210ENST00000621266 ATP6V1DQ9Y5K8 247 aa12.08□□□□□ -0.48
COL4A6-210ENST00000621266 TOMM22Q9NS69 142 aa12.08□□□□□ -0.48
COL4A6-210ENST00000621266 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-210ENST00000621266 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-210ENST00000621266 CCDC39Q9UFE4 941 aa12.07□□□□□ -0.48
COL4A6-210ENST00000621266 VPS53Q5VIR6 699 aa12.07□□□□□ -0.48
COL4A6-210ENST00000621266 NESP48681 1621 aa12.07□□□□□ -0.48
COL4A6-210ENST00000621266 MARCH6O60337 910 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 HMMRO75330 724 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-210ENST00000621266 PSME1Q06323 249 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 IPO7O95373 1038 aaKnown RBP12.06□□□□□ -0.48
COL4A6-210ENST00000621266 GAPVD1Q14C86 1478 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
COL4A6-210ENST00000621266 PPP1R1BQ9UD71 204 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-210ENST00000621266 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
COL4A6-210ENST00000621266 TSPYL1Q9H0U9 437 aa12.05□□□□□ -0.48
COL4A6-210ENST00000621266 CDR1P51861 262 aa12.05□□□□□ -0.48
COL4A6-210ENST00000621266 LEKR1Q6ZMV7 388 aa12.05□□□□□ -0.48
COL4A6-210ENST00000621266 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
COL4A6-210ENST00000621266 BICD2Q8TD16 824 aa12.05□□□□□ -0.48
COL4A6-210ENST00000621266 MRE11P49959 708 aa12.04□□□□□ -0.48
COL4A6-210ENST00000621266 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
COL4A6-210ENST00000621266 NAP1L1P55209 391 aaKnown RBP12.04□□□□□ -0.48
COL4A6-210ENST00000621266 SASS6Q6UVJ0 657 aa12.03□□□□□ -0.48
COL4A6-210ENST00000621266 AEBP1Q8IUX7 1158 aa12.03□□□□□ -0.48
COL4A6-210ENST00000621266 NUTM2GQ5VZR2 741 aa12.03□□□□□ -0.48
COL4A6-210ENST00000621266 NGEFQ8N5V2 710 aa12.03□□□□□ -0.48
COL4A6-210ENST00000621266 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.48
COL4A6-210ENST00000621266 IGF1RP08069 1367 aa12.02□□□□□ -0.48
COL4A6-210ENST00000621266 DCTN1Q14203 1278 aa12.02□□□□□ -0.48
COL4A6-210ENST00000621266 TTLL5Q6EMB2 1281 aa12.02□□□□□ -0.49
COL4A6-210ENST00000621266 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
COL4A6-210ENST00000621266 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-210ENST00000621266 ERICH4A6NGS2 130 aa12.01□□□□□ -0.49
COL4A6-210ENST00000621266 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
COL4A6-210ENST00000621266 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
COL4A6-210ENST00000621266 DNAJC5BQ9UF47 199 aa12.01□□□□□ -0.49
COL4A6-210ENST00000621266 BCL2L13Q9BXK5 485 aa12.01□□□□□ -0.49
COL4A6-210ENST00000621266 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
COL4A6-210ENST00000621266 CAGE1Q8TC20 777 aa12□□□□□ -0.49
COL4A6-210ENST00000621266 UACAQ9BZF9 1416 aa12□□□□□ -0.49
COL4A6-210ENST00000621266 FOSBP53539 338 aa12□□□□□ -0.49
COL4A6-210ENST00000621266 PDILTQ8N807 584 aa12□□□□□ -0.49
COL4A6-210ENST00000621266 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
COL4A6-210ENST00000621266 ANKRD20A12PQ8NF67 263 aa11.99□□□□□ -0.49
COL4A6-210ENST00000621266 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
COL4A6-210ENST00000621266 UQCRHP07919 91 aa11.99□□□□□ -0.49
COL4A6-210ENST00000621266 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-210ENST00000621266 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
COL4A6-210ENST00000621266 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
COL4A6-210ENST00000621266 FRAT2O75474 233 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-210ENST00000621266 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-210ENST00000621266 ERCC4Q92889 916 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-210ENST00000621266 RRP9O43818 475 aaKnown RBP11.98□□□□□ -0.49
COL4A6-210ENST00000621266 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
COL4A6-210ENST00000621266 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
COL4A6-210ENST00000621266 ANO2Q9NQ90 1003 aa11.97□□□□□ -0.49
COL4A6-210ENST00000621266 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-210ENST00000621266 TRAK2O60296 914 aa11.97□□□□□ -0.49
COL4A6-210ENST00000621266 C1orf141Q5JVX7 400 aa11.97□□□□□ -0.49
COL4A6-210ENST00000621266 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
COL4A6-210ENST00000621266 COG6Q9Y2V7 657 aa11.96□□□□□ -0.49
COL4A6-210ENST00000621266 AKAP17AQ02040 695 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms