RNA–Protein interactions for RNA: ENST00000621110.4

AC159540.2-201, humanhuman

TSL 3 BASIC

Gene AC159540.2, Length 754 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC159540.2-201ENST00000621110 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
AC159540.2-201ENST00000621110 SAMD7Q7Z3H4 446 aa12.3□□□□□ -0.44
AC159540.2-201ENST00000621110 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
AC159540.2-201ENST00000621110 OATP04181 439 aa12.29□□□□□ -0.44
AC159540.2-201ENST00000621110 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
AC159540.2-201ENST00000621110 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.29□□□□□ -0.44
AC159540.2-201ENST00000621110 PTPN5P54829 565 aa12.28□□□□□ -0.44
AC159540.2-201ENST00000621110 DNAJB2P25686 324 aa12.26□□□□□ -0.45
AC159540.2-201ENST00000621110 METTL3Q86U44 580 aaKnown RBP12.26□□□□□ -0.45
AC159540.2-201ENST00000621110 TSR3Q9UJK0 312 aaKnown RBP12.26□□□□□ -0.45
AC159540.2-201ENST00000621110 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
AC159540.2-201ENST00000621110 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
AC159540.2-201ENST00000621110 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
AC159540.2-201ENST00000621110 RB1CC1Q8TDY2 1594 aa12.24□□□□□ -0.45
AC159540.2-201ENST00000621110 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
AC159540.2-201ENST00000621110 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 NEUROD2Q15784 382 aa12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 WBP1LQ9NX94 342 aa12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
AC159540.2-201ENST00000621110 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
AC159540.2-201ENST00000621110 ZMYND10O75800 440 aa12.22□□□□□ -0.45
AC159540.2-201ENST00000621110 IRF6O14896 467 aa12.21□□□□□ -0.45
AC159540.2-201ENST00000621110 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
AC159540.2-201ENST00000621110 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
AC159540.2-201ENST00000621110 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
AC159540.2-201ENST00000621110 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
AC159540.2-201ENST00000621110 PPP4CP60510 307 aa12.19□□□□□ -0.46
AC159540.2-201ENST00000621110 SLF2Q8IX21 1173 aa12.19□□□□□ -0.46
AC159540.2-201ENST00000621110 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
AC159540.2-201ENST00000621110 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
AC159540.2-201ENST00000621110 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
AC159540.2-201ENST00000621110 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
AC159540.2-201ENST00000621110 RNF40O75150 1001 aa12.11□□□□□ -0.47
AC159540.2-201ENST00000621110 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
AC159540.2-201ENST00000621110 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
AC159540.2-201ENST00000621110 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
AC159540.2-201ENST00000621110 SCRIBQ14160 1630 aa12.11□□□□□ -0.47
AC159540.2-201ENST00000621110 SLC10A3P09131 477 aa12.1□□□□□ -0.47
AC159540.2-201ENST00000621110 APLP1P51693 650 aa12.1□□□□□ -0.47
AC159540.2-201ENST00000621110 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
AC159540.2-201ENST00000621110 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
AC159540.2-201ENST00000621110 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
AC159540.2-201ENST00000621110 SLC24A3Q9HC58 644 aa12.05□□□□□ -0.48
AC159540.2-201ENST00000621110 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
AC159540.2-201ENST00000621110 ZMYND15Q9H091 742 aa12.04□□□□□ -0.48
AC159540.2-201ENST00000621110 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
AC159540.2-201ENST00000621110 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
AC159540.2-201ENST00000621110 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
AC159540.2-201ENST00000621110 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
AC159540.2-201ENST00000621110 ACTN4O43707 911 aaKnown RBP12.01□□□□□ -0.49
AC159540.2-201ENST00000621110 CFHP08603 1231 aa12.01□□□□□ -0.49
AC159540.2-201ENST00000621110 HRCP23327 699 aa12.01□□□□□ -0.49
AC159540.2-201ENST00000621110 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
AC159540.2-201ENST00000621110 AMHR2Q16671 573 aa12.01□□□□□ -0.49
AC159540.2-201ENST00000621110 MTRQ99707 1265 aa12□□□□□ -0.49
AC159540.2-201ENST00000621110 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
AC159540.2-201ENST00000621110 KCNC4Q03721 635 aa11.99□□□□□ -0.49
AC159540.2-201ENST00000621110 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
AC159540.2-201ENST00000621110 AK7Q96M32 723 aa11.99□□□□□ -0.49
AC159540.2-201ENST00000621110 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
AC159540.2-201ENST00000621110 TRIM66O15016 1216 aa11.98□□□□□ -0.49
AC159540.2-201ENST00000621110 CLCN1P35523 988 aa11.98□□□□□ -0.49
AC159540.2-201ENST00000621110 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
AC159540.2-201ENST00000621110 CD46P15529 392 aa11.97□□□□□ -0.49
AC159540.2-201ENST00000621110 GCGRP47871 477 aa11.97□□□□□ -0.49
AC159540.2-201ENST00000621110 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
AC159540.2-201ENST00000621110 RDH13Q8NBN7 331 aa11.96□□□□□ -0.49
AC159540.2-201ENST00000621110 FAM217BQ9NTX9 383 aaPredicted RBP11.96□□□□□ -0.49
AC159540.2-201ENST00000621110 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
AC159540.2-201ENST00000621110 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
AC159540.2-201ENST00000621110 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
AC159540.2-201ENST00000621110 A0A0G2JS52 829 aa11.92□□□□□ -0.5
AC159540.2-201ENST00000621110 BLOC1S3Q6QNY0 202 aa11.92□□□□□ -0.5
AC159540.2-201ENST00000621110 ARID3AQ99856 593 aa11.92□□□□□ -0.5
AC159540.2-201ENST00000621110 COPS2P61201 443 aa11.91□□□□□ -0.5
AC159540.2-201ENST00000621110 ZPR1O75312 459 aa11.9□□□□□ -0.5
AC159540.2-201ENST00000621110 PARP9Q8IXQ6 854 aa11.89□□□□□ -0.51
AC159540.2-201ENST00000621110 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
AC159540.2-201ENST00000621110 FUT2Q10981 343 aa11.88□□□□□ -0.51
AC159540.2-201ENST00000621110 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
AC159540.2-201ENST00000621110 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
AC159540.2-201ENST00000621110 PDE4DQ08499 809 aa11.87□□□□□ -0.51
AC159540.2-201ENST00000621110 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
AC159540.2-201ENST00000621110 MORN1Q5T089 497 aa11.87□□□□□ -0.51
AC159540.2-201ENST00000621110 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
AC159540.2-201ENST00000621110 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
AC159540.2-201ENST00000621110 NR1I2O75469 434 aa11.85□□□□□ -0.51
AC159540.2-201ENST00000621110 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
AC159540.2-201ENST00000621110 KDM4AO75164 1064 aa11.84□□□□□ -0.51
AC159540.2-201ENST00000621110 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
AC159540.2-201ENST00000621110 CCDC9Q9Y3X0 531 aaKnown RBP11.83□□□□□ -0.52
AC159540.2-201ENST00000621110 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
AC159540.2-201ENST00000621110 USP46P62068 366 aa11.82□□□□□ -0.52
AC159540.2-201ENST00000621110 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
AC159540.2-201ENST00000621110 RGS20O76081 388 aa11.81□□□□□ -0.52
AC159540.2-201ENST00000621110 MS4A1P11836 297 aa11.81□□□□□ -0.52
AC159540.2-201ENST00000621110 GRIPAP1Q4V328 841 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms