RNA–Protein interactions for RNA: ENST00000620924.1

NDFIP2-206, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene NDFIP2, Length 2,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-206ENST00000620924 ADGRB3O60242 1522 aa12.32□□□□□ -0.44
NDFIP2-206ENST00000620924 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
NDFIP2-206ENST00000620924 SLC52A1Q9NWF4 448 aa12.31□□□□□ -0.44
NDFIP2-206ENST00000620924 ABCC5O15440 1437 aa12.3□□□□□ -0.44
NDFIP2-206ENST00000620924 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
NDFIP2-206ENST00000620924 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
NDFIP2-206ENST00000620924 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
NDFIP2-206ENST00000620924 ANKRD30AQ9BXX3 1397 aa12.29□□□□□ -0.44
NDFIP2-206ENST00000620924 CROCC2H7BZ55 1655 aa12.28□□□□□ -0.44
NDFIP2-206ENST00000620924 NOS1P29475 1434 aa12.28□□□□□ -0.44
NDFIP2-206ENST00000620924 RXRBP28702 533 aa12.28□□□□□ -0.44
NDFIP2-206ENST00000620924 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
NDFIP2-206ENST00000620924 PLEKHG1Q9ULL1 1385 aa12.28□□□□□ -0.44
NDFIP2-206ENST00000620924 ATF3P18847 181 aa12.27□□□□□ -0.44
NDFIP2-206ENST00000620924 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.44
NDFIP2-206ENST00000620924 DAPK1P53355 1430 aa12.27□□□□□ -0.44
NDFIP2-206ENST00000620924 LRP6O75581 1613 aa12.27□□□□□ -0.44
NDFIP2-206ENST00000620924 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
NDFIP2-206ENST00000620924 NCOA3Q9Y6Q9 1424 aa12.26□□□□□ -0.45
NDFIP2-206ENST00000620924 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
NDFIP2-206ENST00000620924 RIMS2Q9UQ26 1411 aa12.26□□□□□ -0.45
NDFIP2-206ENST00000620924 APLP2Q06481 763 aa12.26□□□□□ -0.45
NDFIP2-206ENST00000620924 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
NDFIP2-206ENST00000620924 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
NDFIP2-206ENST00000620924 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
NDFIP2-206ENST00000620924 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
NDFIP2-206ENST00000620924 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
NDFIP2-206ENST00000620924 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
NDFIP2-206ENST00000620924 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
NDFIP2-206ENST00000620924 C19orf44Q9H6X5 657 aa12.23□□□□□ -0.45
NDFIP2-206ENST00000620924 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
NDFIP2-206ENST00000620924 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
NDFIP2-206ENST00000620924 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
NDFIP2-206ENST00000620924 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
NDFIP2-206ENST00000620924 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
NDFIP2-206ENST00000620924 AFF2P51816 1311 aa12.21□□□□□ -0.45
NDFIP2-206ENST00000620924 PIK3R4Q99570 1358 aa12.2□□□□□ -0.46
NDFIP2-206ENST00000620924 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
NDFIP2-206ENST00000620924 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.19□□□□□ -0.46
NDFIP2-206ENST00000620924 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
NDFIP2-206ENST00000620924 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
NDFIP2-206ENST00000620924 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
NDFIP2-206ENST00000620924 MYO5BQ9ULV0 1848 aa12.18□□□□□ -0.46
NDFIP2-206ENST00000620924 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
NDFIP2-206ENST00000620924 TMEM131LA2VDJ0 1609 aa12.17□□□□□ -0.46
NDFIP2-206ENST00000620924 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
NDFIP2-206ENST00000620924 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
NDFIP2-206ENST00000620924 ANKRD50Q9ULJ7 1429 aa12.17□□□□□ -0.46
NDFIP2-206ENST00000620924 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
NDFIP2-206ENST00000620924 TRPM2O94759 1503 aa12.16□□□□□ -0.46
NDFIP2-206ENST00000620924 FOXD1Q16676 465 aa12.16□□□□□ -0.46
NDFIP2-206ENST00000620924 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
NDFIP2-206ENST00000620924 ADGRL2O95490 1459 aa12.15□□□□□ -0.46
NDFIP2-206ENST00000620924 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
NDFIP2-206ENST00000620924 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
NDFIP2-206ENST00000620924 LRRC59Q96AG4 307 aaKnown RBP12.15□□□□□ -0.46
NDFIP2-206ENST00000620924 DCCP43146 1447 aa12.15□□□□□ -0.46
NDFIP2-206ENST00000620924 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.47
NDFIP2-206ENST00000620924 RGS12O14924 1447 aa12.14□□□□□ -0.47
NDFIP2-206ENST00000620924 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
NDFIP2-206ENST00000620924 NGLY1Q96IV0 654 aa12.13□□□□□ -0.47
NDFIP2-206ENST00000620924 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
NDFIP2-206ENST00000620924 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
NDFIP2-206ENST00000620924 MST1RQ04912 1400 aa12.11□□□□□ -0.47
NDFIP2-206ENST00000620924 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
NDFIP2-206ENST00000620924 PNPLA6Q8IY17 1366 aa12.1□□□□□ -0.47
NDFIP2-206ENST00000620924 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
NDFIP2-206ENST00000620924 NHSL1Q5SYE7 1610 aa12.1□□□□□ -0.47
NDFIP2-206ENST00000620924 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
NDFIP2-206ENST00000620924 UNC13BO14795 1591 aa12.08□□□□□ -0.48
NDFIP2-206ENST00000620924 ZNF326Q5BKZ1 582 aaKnown RBP12.08□□□□□ -0.48
NDFIP2-206ENST00000620924 E9PCH4 1651 aa12.07□□□□□ -0.48
NDFIP2-206ENST00000620924 USP21Q9UK80 565 aa12.07□□□□□ -0.48
NDFIP2-206ENST00000620924 TRPC5Q9UL62 973 aaPredicted RBP12.07□□□□□ -0.48
NDFIP2-206ENST00000620924 ADGRL3Q9HAR2 1447 aa12.07□□□□□ -0.48
NDFIP2-206ENST00000620924 XRN1Q8IZH2 1706 aaKnown RBP12.06□□□□□ -0.48
NDFIP2-206ENST00000620924 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
NDFIP2-206ENST00000620924 NUP155O75694 1391 aa12.05□□□□□ -0.48
NDFIP2-206ENST00000620924 METP08581 1390 aa12.04□□□□□ -0.48
NDFIP2-206ENST00000620924 IQGAP3Q86VI3 1631 aa12.03□□□□□ -0.48
NDFIP2-206ENST00000620924 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
NDFIP2-206ENST00000620924 NRXN3Q9Y4C0 1643 aa12.02□□□□□ -0.48
NDFIP2-206ENST00000620924 PTCH1Q13635 1447 aa12.02□□□□□ -0.49
NDFIP2-206ENST00000620924 CCDC125Q86Z20 511 aa12.02□□□□□ -0.49
NDFIP2-206ENST00000620924 ROCK1Q13464 1354 aa12.01□□□□□ -0.49
NDFIP2-206ENST00000620924 FNBP4Q8N3X1 1017 aaPredicted RBP12□□□□□ -0.49
NDFIP2-206ENST00000620924 SOS2Q07890 1332 aaPredicted RBP12□□□□□ -0.49
NDFIP2-206ENST00000620924 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
NDFIP2-206ENST00000620924 ATRNO75882 1429 aa12□□□□□ -0.49
NDFIP2-206ENST00000620924 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
NDFIP2-206ENST00000620924 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
NDFIP2-206ENST00000620924 ITGAEP38570 1179 aa11.97□□□□□ -0.49
NDFIP2-206ENST00000620924 SPHKAPQ2M3C7 1700 aa11.97□□□□□ -0.49
NDFIP2-206ENST00000620924 LAMC1P11047 1609 aa11.96□□□□□ -0.49
NDFIP2-206ENST00000620924 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.5
NDFIP2-206ENST00000620924 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
NDFIP2-206ENST00000620924 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
NDFIP2-206ENST00000620924 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
NDFIP2-206ENST00000620924 ROBO2Q9HCK4 1378 aa11.94□□□□□ -0.5
NDFIP2-206ENST00000620924 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms