RNA–Protein interactions for RNA: ENST00000620924.1

NDFIP2-206, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene NDFIP2, Length 2,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-206ENST00000620924 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.78
NDFIP2-206ENST00000620924 ABCC9O60706 1549 aa18.33■□□□□ 0.53
NDFIP2-206ENST00000620924 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
NDFIP2-206ENST00000620924 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
NDFIP2-206ENST00000620924 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
NDFIP2-206ENST00000620924 NACADO15069 1562 aa17.1■□□□□ 0.33
NDFIP2-206ENST00000620924 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
NDFIP2-206ENST00000620924 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
NDFIP2-206ENST00000620924 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
NDFIP2-206ENST00000620924 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
NDFIP2-206ENST00000620924 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
NDFIP2-206ENST00000620924 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
NDFIP2-206ENST00000620924 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
NDFIP2-206ENST00000620924 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
NDFIP2-206ENST00000620924 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
NDFIP2-206ENST00000620924 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
NDFIP2-206ENST00000620924 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
NDFIP2-206ENST00000620924 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
NDFIP2-206ENST00000620924 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
NDFIP2-206ENST00000620924 CUX2O14529 1486 aa15.94■□□□□ 0.14
NDFIP2-206ENST00000620924 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
NDFIP2-206ENST00000620924 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
NDFIP2-206ENST00000620924 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
NDFIP2-206ENST00000620924 SMARCA2P51531 1590 aa15.65■□□□□ 0.1
NDFIP2-206ENST00000620924 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
NDFIP2-206ENST00000620924 NESP48681 1621 aa15.63■□□□□ 0.09
NDFIP2-206ENST00000620924 SMARCA4P51532 1647 aa15.58■□□□□ 0.08
NDFIP2-206ENST00000620924 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
NDFIP2-206ENST00000620924 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
NDFIP2-206ENST00000620924 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
NDFIP2-206ENST00000620924 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
NDFIP2-206ENST00000620924 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
NDFIP2-206ENST00000620924 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
NDFIP2-206ENST00000620924 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
NDFIP2-206ENST00000620924 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.06
NDFIP2-206ENST00000620924 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
NDFIP2-206ENST00000620924 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
NDFIP2-206ENST00000620924 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
NDFIP2-206ENST00000620924 WDR62O43379 1518 aa15.25■□□□□ 0.03
NDFIP2-206ENST00000620924 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
NDFIP2-206ENST00000620924 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
NDFIP2-206ENST00000620924 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
NDFIP2-206ENST00000620924 WIZO95785 1651 aa15.11■□□□□ 0.01
NDFIP2-206ENST00000620924 CFTRP13569 1480 aa15.04■□□□□ -0
NDFIP2-206ENST00000620924 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
NDFIP2-206ENST00000620924 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
NDFIP2-206ENST00000620924 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.01
NDFIP2-206ENST00000620924 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.01
NDFIP2-206ENST00000620924 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
NDFIP2-206ENST00000620924 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
NDFIP2-206ENST00000620924 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
NDFIP2-206ENST00000620924 RSF1Q96T23 1441 aaPredicted RBP14.89□□□□□ -0.03
NDFIP2-206ENST00000620924 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
NDFIP2-206ENST00000620924 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
NDFIP2-206ENST00000620924 PRDM2Q13029 1718 aa14.84□□□□□ -0.03
NDFIP2-206ENST00000620924 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
NDFIP2-206ENST00000620924 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
NDFIP2-206ENST00000620924 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
NDFIP2-206ENST00000620924 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
NDFIP2-206ENST00000620924 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
NDFIP2-206ENST00000620924 FBLN2P98095 1184 aa14.75□□□□□ -0.05
NDFIP2-206ENST00000620924 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
NDFIP2-206ENST00000620924 DNMBPQ6XZF7 1577 aa14.72□□□□□ -0.05
NDFIP2-206ENST00000620924 AQRO60306 1485 aaKnown RBP eCLIP14.71□□□□□ -0.05
NDFIP2-206ENST00000620924 CHD1O14646 1710 aa14.71□□□□□ -0.05
NDFIP2-206ENST00000620924 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
NDFIP2-206ENST00000620924 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
NDFIP2-206ENST00000620924 POLA1P09884 1462 aaPredicted RBP14.62□□□□□ -0.07
NDFIP2-206ENST00000620924 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
NDFIP2-206ENST00000620924 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
NDFIP2-206ENST00000620924 SOGA1O94964 1423 aa14.58□□□□□ -0.08
NDFIP2-206ENST00000620924 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
NDFIP2-206ENST00000620924 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
NDFIP2-206ENST00000620924 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
NDFIP2-206ENST00000620924 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
NDFIP2-206ENST00000620924 WDR97A6NE52 1622 aa14.52□□□□□ -0.08
NDFIP2-206ENST00000620924 MAGI1Q96QZ7 1491 aaPredicted RBP14.52□□□□□ -0.09
NDFIP2-206ENST00000620924 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
NDFIP2-206ENST00000620924 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
NDFIP2-206ENST00000620924 SYNJ2O15056 1496 aa14.47□□□□□ -0.09
NDFIP2-206ENST00000620924 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
NDFIP2-206ENST00000620924 CUX1P39880 1505 aa14.41□□□□□ -0.1
NDFIP2-206ENST00000620924 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
NDFIP2-206ENST00000620924 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
NDFIP2-206ENST00000620924 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
NDFIP2-206ENST00000620924 GRIN2AQ12879 1464 aa14.29□□□□□ -0.12
NDFIP2-206ENST00000620924 ERCC6L2Q5T890 1561 aa14.28□□□□□ -0.12
NDFIP2-206ENST00000620924 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
NDFIP2-206ENST00000620924 NUP160Q12769 1436 aa14.24□□□□□ -0.13
NDFIP2-206ENST00000620924 ADAMTS12P58397 1594 aa14.23□□□□□ -0.13
NDFIP2-206ENST00000620924 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
NDFIP2-206ENST00000620924 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
NDFIP2-206ENST00000620924 SHROOM2Q13796 1616 aa14.18□□□□□ -0.14
NDFIP2-206ENST00000620924 PRG4Q92954 1404 aaPredicted RBP14.16□□□□□ -0.14
NDFIP2-206ENST00000620924 KIF13AQ9H1H9 1805 aa14.16□□□□□ -0.14
NDFIP2-206ENST00000620924 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
NDFIP2-206ENST00000620924 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
NDFIP2-206ENST00000620924 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
NDFIP2-206ENST00000620924 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
NDFIP2-206ENST00000620924 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms