RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 DMRT2Q9Y5R5 561 aa8.77□□□□□ -1.01
FMR1-217ENST00000620828 NALCNQ8IZF0 1738 aa8.77□□□□□ -1.01
FMR1-217ENST00000620828 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1.01
FMR1-217ENST00000620828 SLC52A1Q9NWF4 448 aa8.76□□□□□ -1.01
FMR1-217ENST00000620828 HRCP23327 699 aa8.76□□□□□ -1.01
FMR1-217ENST00000620828 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
FMR1-217ENST00000620828 PTPRUQ92729 1446 aa8.75□□□□□ -1.01
FMR1-217ENST00000620828 KIAA1210Q9ULL0 1709 aa8.75□□□□□ -1.01
FMR1-217ENST00000620828 NUP155O75694 1391 aa8.75□□□□□ -1.01
FMR1-217ENST00000620828 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.75□□□□□ -1.01
FMR1-217ENST00000620828 RIMS2Q9UQ26 1411 aa8.75□□□□□ -1.01
FMR1-217ENST00000620828 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
FMR1-217ENST00000620828 CERKQ8TCT0 537 aa8.74□□□□□ -1.01
FMR1-217ENST00000620828 MYOM2P54296 1465 aa8.74□□□□□ -1.01
FMR1-217ENST00000620828 THEMISQ8N1K5 641 aaPredicted RBP8.74□□□□□ -1.01
FMR1-217ENST00000620828 NCOA3Q9Y6Q9 1424 aa8.74□□□□□ -1.01
FMR1-217ENST00000620828 FBXO41Q8TF61 875 aa8.73□□□□□ -1.01
FMR1-217ENST00000620828 NHSL1Q5SYE7 1610 aa8.73□□□□□ -1.01
FMR1-217ENST00000620828 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
FMR1-217ENST00000620828 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
FMR1-217ENST00000620828 ESF1Q9H501 851 aaKnown RBP8.73□□□□□ -1.01
FMR1-217ENST00000620828 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
FMR1-217ENST00000620828 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
FMR1-217ENST00000620828 ADGRB1O14514 1584 aa8.72□□□□□ -1.01
FMR1-217ENST00000620828 TECPR2O15040 1411 aa8.71□□□□□ -1.02
FMR1-217ENST00000620828 PIK3C2GO75747 1445 aa8.71□□□□□ -1.02
FMR1-217ENST00000620828 ANKRD30BQ9BXX2 1392 aa8.7□□□□□ -1.02
FMR1-217ENST00000620828 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
FMR1-217ENST00000620828 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
FMR1-217ENST00000620828 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
FMR1-217ENST00000620828 ADGRB2O60241 1585 aa8.7□□□□□ -1.02
FMR1-217ENST00000620828 ROBO1Q9Y6N7 1651 aa8.7□□□□□ -1.02
FMR1-217ENST00000620828 AHDC1Q5TGY3 1603 aaPredicted RBP8.69□□□□□ -1.02
FMR1-217ENST00000620828 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
FMR1-217ENST00000620828 PTCH1Q13635 1447 aa8.69□□□□□ -1.02
FMR1-217ENST00000620828 SHPRHQ149N8 1683 aa8.68□□□□□ -1.02
FMR1-217ENST00000620828 FMN2Q9NZ56 1722 aa8.68□□□□□ -1.02
FMR1-217ENST00000620828 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
FMR1-217ENST00000620828 DLC1Q96QB1 1528 aa8.67□□□□□ -1.02
FMR1-217ENST00000620828 USP32Q8NFA0 1604 aa8.67□□□□□ -1.02
FMR1-217ENST00000620828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.67□□□□□ -1.026e-7■■□□□ 12.2
FMR1-217ENST00000620828 DCCP43146 1447 aa8.67□□□□□ -1.02
FMR1-217ENST00000620828 CDC42BPGQ6DT37 1551 aa8.66□□□□□ -1.02
FMR1-217ENST00000620828 TBX22Q9Y458 520 aa8.66□□□□□ -1.02
FMR1-217ENST00000620828 CRYBG1Q9Y4K1 1723 aa8.66□□□□□ -1.02
FMR1-217ENST00000620828 COL22A1Q8NFW1 1626 aaPredicted RBP8.66□□□□□ -1.02
FMR1-217ENST00000620828 TOPAZ1Q8N9V7 1692 aa8.65□□□□□ -1.02
FMR1-217ENST00000620828 RPGRIP1LQ68CZ1 1315 aa8.65□□□□□ -1.03
FMR1-217ENST00000620828 METP08581 1390 aa8.65□□□□□ -1.03
FMR1-217ENST00000620828 PLPPR3Q6T4P5 718 aa8.65□□□□□ -1.03
FMR1-217ENST00000620828 MPHOSPH9Q99550 1183 aa8.65□□□□□ -1.03
FMR1-217ENST00000620828 KCNA6P17658 529 aa8.64□□□□□ -1.03
FMR1-217ENST00000620828 TRPM1Q7Z4N2 1603 aa8.64□□□□□ -1.03
FMR1-217ENST00000620828 DHX57Q6P158 1386 aaKnown RBP8.64□□□□□ -1.03
FMR1-217ENST00000620828 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
FMR1-217ENST00000620828 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
FMR1-217ENST00000620828 PHLPP1O60346 1717 aa8.62□□□□□ -1.03
FMR1-217ENST00000620828 ABCA3Q99758 1704 aa8.62□□□□□ -1.03
FMR1-217ENST00000620828 RGPD8O14715 1765 aaPredicted RBP8.62□□□□□ -1.03
FMR1-217ENST00000620828 TRPM3Q9HCF6 1732 aaPredicted RBP8.62□□□□□ -1.03
FMR1-217ENST00000620828 MARF1Q9Y4F3 1742 aaKnown RBP8.62□□□□□ -1.03
FMR1-217ENST00000620828 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.61□□□□□ -1.03
FMR1-217ENST00000620828 MED1Q15648 1581 aaPredicted RBP8.61□□□□□ -1.03
FMR1-217ENST00000620828 MST1RQ04912 1400 aa8.6□□□□□ -1.03
FMR1-217ENST00000620828 CCDC144AA2RUR9 1427 aa8.6□□□□□ -1.03
FMR1-217ENST00000620828 ADGRL3Q9HAR2 1447 aa8.59□□□□□ -1.03
FMR1-217ENST00000620828 TMEM94Q12767 1356 aa8.59□□□□□ -1.03
FMR1-217ENST00000620828 KIF1AQ12756 1690 aa8.59□□□□□ -1.03
FMR1-217ENST00000620828 ITGAEP38570 1179 aa8.59□□□□□ -1.04
FMR1-217ENST00000620828 ROBO2Q9HCK4 1378 aa8.58□□□□□ -1.04
FMR1-217ENST00000620828 EID1Q9Y6B2 187 aa8.58□□□□□ -1.04
FMR1-217ENST00000620828 USP54Q70EL1 1684 aa8.58□□□□□ -1.04
FMR1-217ENST00000620828 ALS2Q96Q42 1657 aa8.57□□□□□ -1.04
FMR1-217ENST00000620828 ABCC11Q96J66 1382 aa8.57□□□□□ -1.04
FMR1-217ENST00000620828 LRPPRCP42704 1394 aaKnown RBP8.57□□□□□ -1.04
FMR1-217ENST00000620828 FOXD1Q16676 465 aa8.56□□□□□ -1.04
FMR1-217ENST00000620828 SIRT1Q96EB6 747 aa8.56□□□□□ -1.04
FMR1-217ENST00000620828 SLC4A1APQ9BWU0 796 aaKnown RBP8.56□□□□□ -1.04
FMR1-217ENST00000620828 ADGRF5Q8IZF2 1346 aa8.56□□□□□ -1.04
FMR1-217ENST00000620828 PXDNQ92626 1479 aa8.55□□□□□ -1.04
FMR1-217ENST00000620828 ITSN1Q15811 1721 aa8.55□□□□□ -1.04
FMR1-217ENST00000620828 YTHDC2Q9H6S0 1430 aaKnown RBP8.54□□□□□ -1.04
FMR1-217ENST00000620828 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.54□□□□□ -1.04
FMR1-217ENST00000620828 C14orf93Q9H972 538 aaKnown RBP8.54□□□□□ -1.04
FMR1-217ENST00000620828 SLC26A8Q96RN1 970 aa8.54□□□□□ -1.04
FMR1-217ENST00000620828 QRICH2Q9H0J4 1663 aa8.54□□□□□ -1.04
FMR1-217ENST00000620828 NRKQ7Z2Y5 1582 aa8.53□□□□□ -1.04
FMR1-217ENST00000620828 HDGFP51858 240 aaKnown RBP8.53□□□□□ -1.04
FMR1-217ENST00000620828 AKAP12Q02952 1782 aa8.52□□□□□ -1.04
FMR1-217ENST00000620828 C1orf167Q5SNV9 1468 aa8.52□□□□□ -1.05
FMR1-217ENST00000620828 LRP6O75581 1613 aa8.52□□□□□ -1.05
FMR1-217ENST00000620828 VGFO15240 615 aaPredicted RBP8.51□□□□□ -1.05
FMR1-217ENST00000620828 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
FMR1-217ENST00000620828 AMOTL2Q9Y2J4 779 aa8.51□□□□□ -1.05
FMR1-217ENST00000620828 GPRASP1Q5JY77 1395 aa8.51□□□□□ -1.05
FMR1-217ENST00000620828 PLEKHH1Q9ULM0 1364 aa8.5□□□□□ -1.05
FMR1-217ENST00000620828 NRAPQ86VF7 1730 aa8.5□□□□□ -1.05
FMR1-217ENST00000620828 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
FMR1-217ENST00000620828 PHRF1Q9P1Y6 1649 aaKnown RBP8.48□□□□□ -1.05
FMR1-217ENST00000620828 HSPA1LP34931 641 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms