RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
TARDBP-223ENST00000620632 PPLO60437 1756 aa15.98■□□□□ 0.15
TARDBP-223ENST00000620632 LTBP4Q8N2S1 1624 aa15.97■□□□□ 0.15
TARDBP-223ENST00000620632 CCDC144AA2RUR9 1427 aa15.97■□□□□ 0.15
TARDBP-223ENST00000620632 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
TARDBP-223ENST00000620632 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
TARDBP-223ENST00000620632 NUTM2DQ5VT03 806 aaPredicted RBP15.96■□□□□ 0.15
TARDBP-223ENST00000620632 SPATA31E1Q6ZUB1 1445 aa15.95■□□□□ 0.14
TARDBP-223ENST00000620632 NRXN3Q9Y4C0 1643 aa15.95■□□□□ 0.14
TARDBP-223ENST00000620632 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
TARDBP-223ENST00000620632 ZNF335Q9H4Z2 1342 aaPredicted RBP15.94■□□□□ 0.14
TARDBP-223ENST00000620632 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
TARDBP-223ENST00000620632 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
TARDBP-223ENST00000620632 ZNF326Q5BKZ1 582 aaKnown RBP15.92■□□□□ 0.14
TARDBP-223ENST00000620632 ADAMTS13Q76LX8 1427 aa15.91■□□□□ 0.14
TARDBP-223ENST00000620632 SETBP1Q9Y6X0 1596 aa15.9■□□□□ 0.14
TARDBP-223ENST00000620632 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
TARDBP-223ENST00000620632 SETD1AO15047 1707 aaKnown RBP15.89■□□□□ 0.13
TARDBP-223ENST00000620632 PPP1R15AO75807 674 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-223ENST00000620632 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
TARDBP-223ENST00000620632 SLC26A8Q96RN1 970 aa15.89■□□□□ 0.13
TARDBP-223ENST00000620632 CHD2O14647 1828 aaKnown RBP15.88■□□□□ 0.13
TARDBP-223ENST00000620632 RGL3Q3MIN7 710 aa15.87■□□□□ 0.13
TARDBP-223ENST00000620632 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
TARDBP-223ENST00000620632 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
TARDBP-223ENST00000620632 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
TARDBP-223ENST00000620632 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
TARDBP-223ENST00000620632 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
TARDBP-223ENST00000620632 CPS1P31327 1500 aa15.84■□□□□ 0.13
TARDBP-223ENST00000620632 CERKQ8TCT0 537 aa15.84■□□□□ 0.13
TARDBP-223ENST00000620632 RPGRIP1LQ68CZ1 1315 aa15.84■□□□□ 0.13
TARDBP-223ENST00000620632 BCANQ96GW7 911 aa15.83■□□□□ 0.12
TARDBP-223ENST00000620632 ADGRF5Q8IZF2 1346 aa15.83■□□□□ 0.12
TARDBP-223ENST00000620632 ALKQ9UM73 1620 aa15.83■□□□□ 0.12
TARDBP-223ENST00000620632 PTPRUQ92729 1446 aa15.82■□□□□ 0.12
TARDBP-223ENST00000620632 LRRC7Q96NW7 1537 aa15.82■□□□□ 0.12
TARDBP-223ENST00000620632 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
TARDBP-223ENST00000620632 TBX22Q9Y458 520 aa15.81■□□□□ 0.12
TARDBP-223ENST00000620632 MYOM2P54296 1465 aa15.8■□□□□ 0.12
TARDBP-223ENST00000620632 NRXN1Q9ULB1 1477 aa15.8■□□□□ 0.12
TARDBP-223ENST00000620632 METP08581 1390 aa15.8■□□□□ 0.12
TARDBP-223ENST00000620632 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
TARDBP-223ENST00000620632 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
TARDBP-223ENST00000620632 SIN3AQ96ST3 1273 aa15.79■□□□□ 0.12
TARDBP-223ENST00000620632 ASXL1Q8IXJ9 1541 aa15.78■□□□□ 0.12
TARDBP-223ENST00000620632 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
TARDBP-223ENST00000620632 KCNA6P17658 529 aa15.78■□□□□ 0.12
TARDBP-223ENST00000620632 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
TARDBP-223ENST00000620632 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
TARDBP-223ENST00000620632 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
TARDBP-223ENST00000620632 LAMC1P11047 1609 aa15.74■□□□□ 0.11
TARDBP-223ENST00000620632 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
TARDBP-223ENST00000620632 AMOTL2Q9Y2J4 779 aa15.72■□□□□ 0.11
TARDBP-223ENST00000620632 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
TARDBP-223ENST00000620632 TMEM94Q12767 1356 aa15.72■□□□□ 0.11
TARDBP-223ENST00000620632 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.11
TARDBP-223ENST00000620632 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
TARDBP-223ENST00000620632 CFAP70Q5T0N1 1121 aa15.69■□□□□ 0.1
TARDBP-223ENST00000620632 PROSER2Q86WR7 435 aaPredicted RBP15.69■□□□□ 0.1
TARDBP-223ENST00000620632 FBXO41Q8TF61 875 aa15.69■□□□□ 0.1
TARDBP-223ENST00000620632 ADGRB1O14514 1584 aa15.69■□□□□ 0.1
TARDBP-223ENST00000620632 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
TARDBP-223ENST00000620632 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
TARDBP-223ENST00000620632 TMEM132EQ6IEE7 984 aa15.68■□□□□ 0.1
TARDBP-223ENST00000620632 L3MBTL2Q969R5 705 aa15.68■□□□□ 0.1
TARDBP-223ENST00000620632 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
TARDBP-223ENST00000620632 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-223ENST00000620632 ROBO2Q9HCK4 1378 aa15.67■□□□□ 0.1
TARDBP-223ENST00000620632 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
TARDBP-223ENST00000620632 KIAA1210Q9ULL0 1709 aa15.67■□□□□ 0.1
TARDBP-223ENST00000620632 PTCH1Q13635 1447 aa15.67■□□□□ 0.1
TARDBP-223ENST00000620632 TECPR2O15040 1411 aa15.65■□□□□ 0.1
TARDBP-223ENST00000620632 YTHDC2Q9H6S0 1430 aaKnown RBP15.65■□□□□ 0.1
TARDBP-223ENST00000620632 LRPPRCP42704 1394 aaKnown RBP15.64■□□□□ 0.09
TARDBP-223ENST00000620632 UBAP1LF5GYI3 381 aa15.64■□□□□ 0.09
TARDBP-223ENST00000620632 STAC3Q96MF2 364 aa15.64■□□□□ 0.09
TARDBP-223ENST00000620632 NCOA3Q9Y6Q9 1424 aa15.63■□□□□ 0.09
TARDBP-223ENST00000620632 TRPM1Q7Z4N2 1603 aa15.63■□□□□ 0.09
TARDBP-223ENST00000620632 STK26Q9P289 416 aa15.62■□□□□ 0.09
TARDBP-223ENST00000620632 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
TARDBP-223ENST00000620632 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
TARDBP-223ENST00000620632 PLEKHH1Q9ULM0 1364 aa15.62■□□□□ 0.09
TARDBP-223ENST00000620632 MSH6P52701 1360 aa15.61■□□□□ 0.09
TARDBP-223ENST00000620632 ADGRL3Q9HAR2 1447 aa15.6■□□□□ 0.09
TARDBP-223ENST00000620632 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
TARDBP-223ENST00000620632 NBPF1Q3BBV0 1214 aa15.59■□□□□ 0.09
TARDBP-223ENST00000620632 TOM1O60784 492 aa15.58■□□□□ 0.08
TARDBP-223ENST00000620632 PIP4K2BP78356 416 aa15.58■□□□□ 0.08
TARDBP-223ENST00000620632 NBPF8Q3BBV2 869 aa15.58■□□□□ 0.08
TARDBP-223ENST00000620632 WAPLQ7Z5K2 1190 aa15.58■□□□□ 0.08
TARDBP-223ENST00000620632 TONSLQ96HA7 1378 aa15.58■□□□□ 0.08
TARDBP-223ENST00000620632 ROBO1Q9Y6N7 1651 aa15.57■□□□□ 0.08
TARDBP-223ENST00000620632 C14orf37Q86TY3 774 aa15.57■□□□□ 0.08
TARDBP-223ENST00000620632 C19orf44Q9H6X5 657 aa15.56■□□□□ 0.08
TARDBP-223ENST00000620632 CLSPNQ9HAW4 1339 aa15.56■□□□□ 0.08
TARDBP-223ENST00000620632 DCCP43146 1447 aa15.56■□□□□ 0.08
TARDBP-223ENST00000620632 FAM135BQ49AJ0 1406 aa15.56■□□□□ 0.08
TARDBP-223ENST00000620632 CDC42BPGQ6DT37 1551 aa15.55■□□□□ 0.08
TARDBP-223ENST00000620632 TRAK1Q9UPV9 953 aa15.55■□□□□ 0.08
TARDBP-223ENST00000620632 MST1RQ04912 1400 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms