RNA–Protein interactions for RNA: ENST00000619917.4

POLR2E-214, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5 BASIC

Gene POLR2E, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-214ENST00000619917 STRCP1A6NGW2 1772 aa32.35■■■□□ 2.77
POLR2E-214ENST00000619917 NUTM2DQ5VT03 806 aaPredicted RBP32.34■■■□□ 2.77
POLR2E-214ENST00000619917 SLC26A8Q96RN1 970 aa32.34■■■□□ 2.77
POLR2E-214ENST00000619917 CLTCL1P53675 1640 aa32.33■■■□□ 2.77
POLR2E-214ENST00000619917 FOXD1Q16676 465 aa32.33■■■□□ 2.77
POLR2E-214ENST00000619917 HDGFP51858 240 aaKnown RBP32.31■■■□□ 2.76
POLR2E-214ENST00000619917 MPHOSPH9Q99550 1183 aa32.31■■■□□ 2.76
POLR2E-214ENST00000619917 PPP1R15AO75807 674 aaPredicted RBP32.3■■■□□ 2.76
POLR2E-214ENST00000619917 PLEKHG1Q9ULL1 1385 aa32.3■■■□□ 2.76
POLR2E-214ENST00000619917 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.29■■■□□ 2.76
POLR2E-214ENST00000619917 RAB3GAP2Q9H2M9 1393 aa32.29■■■□□ 2.76
POLR2E-214ENST00000619917 BCANQ96GW7 911 aa32.28■■■□□ 2.76
POLR2E-214ENST00000619917 LRRC7Q96NW7 1537 aa32.25■■■□□ 2.75
POLR2E-214ENST00000619917 ZNF326Q5BKZ1 582 aaKnown RBP32.23■■■□□ 2.75
POLR2E-214ENST00000619917 UBAP1LF5GYI3 381 aa32.22■■■□□ 2.75
POLR2E-214ENST00000619917 KCNA6P17658 529 aa32.19■■■□□ 2.74
POLR2E-214ENST00000619917 ACIN1Q9UKV3 1341 aaKnown RBP32.19■■■□□ 2.74
POLR2E-214ENST00000619917 ADAMTS13Q76LX8 1427 aa32.17■■■□□ 2.74
POLR2E-214ENST00000619917 TBX22Q9Y458 520 aa32.16■■■□□ 2.74
POLR2E-214ENST00000619917 KIF1BO60333 1816 aa32.16■■■□□ 2.74
POLR2E-214ENST00000619917 NEXMIFQ5QGS0 1516 aa32.14■■■□□ 2.74
POLR2E-214ENST00000619917 NWD1Q149M9 1564 aa32.1■■■□□ 2.73
POLR2E-214ENST00000619917 CCDC144AA2RUR9 1427 aa32.09■■■□□ 2.73
POLR2E-214ENST00000619917 RBM33Q96EV2 1170 aaKnown RBP32.08■■■□□ 2.73
POLR2E-214ENST00000619917 ALKQ9UM73 1620 aa32.08■■■□□ 2.73
POLR2E-214ENST00000619917 TOM1O60784 492 aa32.07■■■□□ 2.72
POLR2E-214ENST00000619917 HRCP23327 699 aa32.07■■■□□ 2.72
POLR2E-214ENST00000619917 NRXN3Q9Y4C0 1643 aa32.07■■■□□ 2.72
POLR2E-214ENST00000619917 XIRP1Q702N8 1843 aaKnown RBP32.07■■■□□ 2.72
POLR2E-214ENST00000619917 TMEM94Q12767 1356 aa32.07■■■□□ 2.72
POLR2E-214ENST00000619917 PROSER2Q86WR7 435 aaPredicted RBP32.06■■■□□ 2.72
POLR2E-214ENST00000619917 DIP2AQ14689 1571 aa32.06■■■□□ 2.72
POLR2E-214ENST00000619917 CHD2O14647 1828 aaKnown RBP32.05■■■□□ 2.72
POLR2E-214ENST00000619917 SETBP1Q9Y6X0 1596 aa32.05■■■□□ 2.72
POLR2E-214ENST00000619917 PIP4K2BP78356 416 aa32.04■■■□□ 2.72
POLR2E-214ENST00000619917 NKTRP30414 1462 aaKnown RBP32.03■■■□□ 2.72
POLR2E-214ENST00000619917 RPGRIP1LQ68CZ1 1315 aa32.02■■■□□ 2.72
POLR2E-214ENST00000619917 SPATA31E1Q6ZUB1 1445 aa32.01■■■□□ 2.72
POLR2E-214ENST00000619917 PTPRUQ92729 1446 aa32■■■□□ 2.71
POLR2E-214ENST00000619917 PIK3R4Q99570 1358 aa32■■■□□ 2.71
POLR2E-214ENST00000619917 SCAF1Q9H7N4 1312 aaKnown RBP32■■■□□ 2.71
POLR2E-214ENST00000619917 VGFO15240 615 aaPredicted RBP31.99■■■□□ 2.71
POLR2E-214ENST00000619917 RGL3Q3MIN7 710 aa31.99■■■□□ 2.71
POLR2E-214ENST00000619917 METP08581 1390 aa31.97■■■□□ 2.71
POLR2E-214ENST00000619917 AMOTL2Q9Y2J4 779 aa31.96■■■□□ 2.71
POLR2E-214ENST00000619917 PPLO60437 1756 aa31.95■■■□□ 2.71
POLR2E-214ENST00000619917 ANKRD30BQ9BXX2 1392 aa31.94■■■□□ 2.7
POLR2E-214ENST00000619917 ADGRF5Q8IZF2 1346 aa31.9■■■□□ 2.7
POLR2E-214ENST00000619917 HSPA1LP34931 641 aa31.87■■■□□ 2.69
POLR2E-214ENST00000619917 XRN1Q8IZH2 1706 aaKnown RBP31.86■■■□□ 2.69
POLR2E-214ENST00000619917 MSH6P52701 1360 aa31.84■■■□□ 2.69
POLR2E-214ENST00000619917 SETD1AO15047 1707 aaKnown RBP31.84■■■□□ 2.69
POLR2E-214ENST00000619917 IFT172Q9UG01 1749 aa31.84■■■□□ 2.69
POLR2E-214ENST00000619917 NCOA3Q9Y6Q9 1424 aa31.83■■■□□ 2.69
POLR2E-214ENST00000619917 C14orf37Q86TY3 774 aa31.79■■■□□ 2.68
POLR2E-214ENST00000619917 C19orf44Q9H6X5 657 aa31.75■■■□□ 2.67
POLR2E-214ENST00000619917 FAM135BQ49AJ0 1406 aa31.75■■■□□ 2.67
POLR2E-214ENST00000619917 PIK3C2GO75747 1445 aa31.74■■■□□ 2.67
POLR2E-214ENST00000619917 SLAIN2Q9P270 581 aa31.73■■■□□ 2.67
POLR2E-214ENST00000619917 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.72■■■□□ 2.67
POLR2E-214ENST00000619917 ROBO2Q9HCK4 1378 aa31.71■■■□□ 2.67
POLR2E-214ENST00000619917 NRXN1Q9ULB1 1477 aa31.7■■■□□ 2.66
POLR2E-214ENST00000619917 MYOM2P54296 1465 aa31.69■■■□□ 2.66
POLR2E-214ENST00000619917 TMEM132EQ6IEE7 984 aa31.68■■■□□ 2.66
POLR2E-214ENST00000619917 PTCH1Q13635 1447 aa31.67■■■□□ 2.66
POLR2E-214ENST00000619917 ASXL1Q8IXJ9 1541 aa31.67■■■□□ 2.66
POLR2E-214ENST00000619917 ATF3P18847 181 aa31.67■■■□□ 2.66
POLR2E-214ENST00000619917 CADPS2Q86UW7 1296 aa31.67■■■□□ 2.66
POLR2E-214ENST00000619917 ROBO1Q9Y6N7 1651 aa31.67■■■□□ 2.66
POLR2E-214ENST00000619917 PRAG1Q86YV5 1406 aa31.66■■■□□ 2.66
POLR2E-214ENST00000619917 TRIM26Q12899 539 aaPredicted RBP31.65■■■□□ 2.66
POLR2E-214ENST00000619917 C14orf93Q9H972 538 aaKnown RBP31.65■■■□□ 2.66
POLR2E-214ENST00000619917 CFAP70Q5T0N1 1121 aa31.64■■■□□ 2.66
POLR2E-214ENST00000619917 STK26Q9P289 416 aa31.63■■■□□ 2.65
POLR2E-214ENST00000619917 DHX57Q6P158 1386 aaKnown RBP31.63■■■□□ 2.65
POLR2E-214ENST00000619917 ADGRL3Q9HAR2 1447 aa31.63■■■□□ 2.65
POLR2E-214ENST00000619917 DCAF11Q8TEB1 546 aa31.62■■■□□ 2.65
POLR2E-214ENST00000619917 KDM2AQ9Y2K7 1162 aa31.62■■■□□ 2.65
POLR2E-214ENST00000619917 DCCP43146 1447 aa31.61■■■□□ 2.65
POLR2E-214ENST00000619917 LRPPRCP42704 1394 aaKnown RBP31.61■■■□□ 2.65
POLR2E-214ENST00000619917 NALCNQ8IZF0 1738 aa31.6■■■□□ 2.65
POLR2E-214ENST00000619917 ABCC11Q96J66 1382 aa31.56■■■□□ 2.64
POLR2E-214ENST00000619917 TECPR2O15040 1411 aa31.56■■■□□ 2.64
POLR2E-214ENST00000619917 YTHDC2Q9H6S0 1430 aaKnown RBP31.56■■■□□ 2.64
POLR2E-214ENST00000619917 MST1RQ04912 1400 aa31.55■■■□□ 2.64
POLR2E-214ENST00000619917 WAPLQ7Z5K2 1190 aa31.54■■■□□ 2.64
POLR2E-214ENST00000619917 DISP3Q9P2K9 1392 aa31.54■■■□□ 2.64
POLR2E-214ENST00000619917 LAMC1P11047 1609 aa31.52■■■□□ 2.64
POLR2E-214ENST00000619917 PLEKHH1Q9ULM0 1364 aa31.52■■■□□ 2.64
POLR2E-214ENST00000619917 BRINP3Q76B58 766 aa31.51■■■□□ 2.63
POLR2E-214ENST00000619917 STAC3Q96MF2 364 aa31.5■■■□□ 2.63
POLR2E-214ENST00000619917 KNDC1Q76NI1 1749 aa31.49■■■□□ 2.63
POLR2E-214ENST00000619917 SIN3AQ96ST3 1273 aa31.49■■■□□ 2.63
POLR2E-214ENST00000619917 ADGRB1O14514 1584 aa31.46■■■□□ 2.63
POLR2E-214ENST00000619917 PHLPP1O60346 1717 aa31.46■■■□□ 2.63
POLR2E-214ENST00000619917 SIRT1Q96EB6 747 aa31.45■■■□□ 2.63
POLR2E-214ENST00000619917 MED1Q15648 1581 aaPredicted RBP31.44■■■□□ 2.62
POLR2E-214ENST00000619917 C1orf167Q5SNV9 1468 aa31.43■■■□□ 2.62
POLR2E-214ENST00000619917 COL16A1Q07092 1604 aaPredicted RBP31.41■■■□□ 2.62
POLR2E-214ENST00000619917 AHDC1Q5TGY3 1603 aaPredicted RBP31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms