RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 STRCP1A6NGW2 1772 aa23.53■■□□□ 1.36
LINC00221-202ENST00000619530 TMEM131LA2VDJ0 1609 aa23.51■■□□□ 1.35
LINC00221-202ENST00000619530 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
LINC00221-202ENST00000619530 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
LINC00221-202ENST00000619530 TOM1O60784 492 aa23.5■■□□□ 1.35
LINC00221-202ENST00000619530 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.47■■□□□ 1.35
LINC00221-202ENST00000619530 LRRC7Q96NW7 1537 aa23.47■■□□□ 1.35
LINC00221-202ENST00000619530 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
LINC00221-202ENST00000619530 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
LINC00221-202ENST00000619530 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
LINC00221-202ENST00000619530 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
LINC00221-202ENST00000619530 KCNA6P17658 529 aa23.43■■□□□ 1.34
LINC00221-202ENST00000619530 PLEKHG1Q9ULL1 1385 aa23.42■■□□□ 1.34
LINC00221-202ENST00000619530 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
LINC00221-202ENST00000619530 RBM33Q96EV2 1170 aaKnown RBP23.42■■□□□ 1.34
LINC00221-202ENST00000619530 FOXD1Q16676 465 aa23.38■■□□□ 1.33
LINC00221-202ENST00000619530 HSPA1LP34931 641 aa23.36■■□□□ 1.33
LINC00221-202ENST00000619530 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
LINC00221-202ENST00000619530 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
LINC00221-202ENST00000619530 CLTCL1P53675 1640 aa23.34■■□□□ 1.33
LINC00221-202ENST00000619530 TRPM2O94759 1503 aa23.33■■□□□ 1.33
LINC00221-202ENST00000619530 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.33
LINC00221-202ENST00000619530 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
LINC00221-202ENST00000619530 ALKQ9UM73 1620 aa23.31■■□□□ 1.32
LINC00221-202ENST00000619530 ADAMTS13Q76LX8 1427 aa23.3■■□□□ 1.32
LINC00221-202ENST00000619530 KIF1BO60333 1816 aa23.29■■□□□ 1.32
LINC00221-202ENST00000619530 SETD5Q9C0A6 1442 aa23.29■■□□□ 1.32
LINC00221-202ENST00000619530 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
LINC00221-202ENST00000619530 DISP3Q9P2K9 1392 aa23.28■■□□□ 1.32
LINC00221-202ENST00000619530 NWD1Q149M9 1564 aa23.26■■□□□ 1.31
LINC00221-202ENST00000619530 NKTRP30414 1462 aaKnown RBP23.25■■□□□ 1.31
LINC00221-202ENST00000619530 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
LINC00221-202ENST00000619530 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
LINC00221-202ENST00000619530 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
LINC00221-202ENST00000619530 NEXMIFQ5QGS0 1516 aa23.21■■□□□ 1.31
LINC00221-202ENST00000619530 MSH6P52701 1360 aa23.21■■□□□ 1.31
LINC00221-202ENST00000619530 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
LINC00221-202ENST00000619530 PIK3R4Q99570 1358 aa23.2■■□□□ 1.31
LINC00221-202ENST00000619530 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
LINC00221-202ENST00000619530 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
LINC00221-202ENST00000619530 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
LINC00221-202ENST00000619530 PTPRUQ92729 1446 aa23.19■■□□□ 1.3
LINC00221-202ENST00000619530 RPGRIP1LQ68CZ1 1315 aa23.18■■□□□ 1.3
LINC00221-202ENST00000619530 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
LINC00221-202ENST00000619530 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
LINC00221-202ENST00000619530 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
LINC00221-202ENST00000619530 METP08581 1390 aa23.17■■□□□ 1.3
LINC00221-202ENST00000619530 SLAIN2Q9P270 581 aa23.17■■□□□ 1.3
LINC00221-202ENST00000619530 ATF3P18847 181 aa23.13■■□□□ 1.29
LINC00221-202ENST00000619530 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
LINC00221-202ENST00000619530 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
LINC00221-202ENST00000619530 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
LINC00221-202ENST00000619530 PPLO60437 1756 aa23.09■■□□□ 1.29
LINC00221-202ENST00000619530 ILDR2Q71H61 639 aa23.09■■□□□ 1.29
LINC00221-202ENST00000619530 ADGRF5Q8IZF2 1346 aa23.08■■□□□ 1.29
LINC00221-202ENST00000619530 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
LINC00221-202ENST00000619530 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
LINC00221-202ENST00000619530 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.06■■□□□ 1.28
LINC00221-202ENST00000619530 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
LINC00221-202ENST00000619530 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
LINC00221-202ENST00000619530 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
LINC00221-202ENST00000619530 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.27
LINC00221-202ENST00000619530 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
LINC00221-202ENST00000619530 HRCP23327 699 aa23.01■■□□□ 1.27
LINC00221-202ENST00000619530 STK26Q9P289 416 aa23.01■■□□□ 1.27
LINC00221-202ENST00000619530 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
LINC00221-202ENST00000619530 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
LINC00221-202ENST00000619530 ROBO2Q9HCK4 1378 aa22.98■■□□□ 1.27
LINC00221-202ENST00000619530 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
LINC00221-202ENST00000619530 PHLPP1O60346 1717 aa22.96■■□□□ 1.27
LINC00221-202ENST00000619530 IFT172Q9UG01 1749 aa22.96■■□□□ 1.27
LINC00221-202ENST00000619530 BRINP3Q76B58 766 aa22.94■■□□□ 1.26
LINC00221-202ENST00000619530 ADGRL3Q9HAR2 1447 aa22.94■■□□□ 1.26
LINC00221-202ENST00000619530 DCCP43146 1447 aa22.92■■□□□ 1.26
LINC00221-202ENST00000619530 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
LINC00221-202ENST00000619530 PTCH1Q13635 1447 aa22.92■■□□□ 1.26
LINC00221-202ENST00000619530 CFAP70Q5T0N1 1121 aa22.91■■□□□ 1.26
LINC00221-202ENST00000619530 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
LINC00221-202ENST00000619530 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
LINC00221-202ENST00000619530 PIK3C2GO75747 1445 aa22.9■■□□□ 1.26
LINC00221-202ENST00000619530 MST1RQ04912 1400 aa22.9■■□□□ 1.26
LINC00221-202ENST00000619530 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.25
LINC00221-202ENST00000619530 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.25
LINC00221-202ENST00000619530 C14orf93Q9H972 538 aaKnown RBP22.89■■□□□ 1.25
LINC00221-202ENST00000619530 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
LINC00221-202ENST00000619530 DDX17Q92841 729 aaKnown RBP22.87■■□□□ 1.25
LINC00221-202ENST00000619530 JCADQ9P266 1359 aa22.87■■□□□ 1.25
LINC00221-202ENST00000619530 COL16A1Q07092 1604 aaPredicted RBP22.85■■□□□ 1.25
LINC00221-202ENST00000619530 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
LINC00221-202ENST00000619530 ORAI2Q96SN7 254 aa22.84■■□□□ 1.25
LINC00221-202ENST00000619530 ABCC11Q96J66 1382 aa22.84■■□□□ 1.25
LINC00221-202ENST00000619530 MYOM2P54296 1465 aa22.83■■□□□ 1.25
LINC00221-202ENST00000619530 PRAG1Q86YV5 1406 aa22.83■■□□□ 1.25
LINC00221-202ENST00000619530 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.25
LINC00221-202ENST00000619530 AHDC1Q5TGY3 1603 aaPredicted RBP22.83■■□□□ 1.25
LINC00221-202ENST00000619530 SOCS7O14512 581 aa22.83■■□□□ 1.25
LINC00221-202ENST00000619530 DHX57Q6P158 1386 aaKnown RBP22.82■■□□□ 1.24
LINC00221-202ENST00000619530 PLEKHH1Q9ULM0 1364 aa22.82■■□□□ 1.24
LINC00221-202ENST00000619530 C1orf167Q5SNV9 1468 aa22.82■■□□□ 1.24
LINC00221-202ENST00000619530 NRXN1Q9ULB1 1477 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms