RNA–Protein interactions for RNA: ENST00000619169.4

PGAP3-211, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,094 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-211ENST00000619169 RIMS2Q9UQ26 1411 aa23.65■■□□□ 1.38
PGAP3-211ENST00000619169 TONSLQ96HA7 1378 aa23.65■■□□□ 1.38
PGAP3-211ENST00000619169 PPLO60437 1756 aa23.64■■□□□ 1.37
PGAP3-211ENST00000619169 TIMELESSQ9UNS1 1208 aa23.63■■□□□ 1.37
PGAP3-211ENST00000619169 LTKP29376 864 aa23.63■■□□□ 1.37
PGAP3-211ENST00000619169 HSPA2P54652 639 aa23.62■■□□□ 1.37
PGAP3-211ENST00000619169 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
PGAP3-211ENST00000619169 NUTM2DQ5VT03 806 aaPredicted RBP23.61■■□□□ 1.37
PGAP3-211ENST00000619169 MYOM2P54296 1465 aa23.59■■□□□ 1.37
PGAP3-211ENST00000619169 ADGRF5Q8IZF2 1346 aa23.58■■□□□ 1.37
PGAP3-211ENST00000619169 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.36
PGAP3-211ENST00000619169 TXNDC2Q86VQ3 553 aa23.57■■□□□ 1.36
PGAP3-211ENST00000619169 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
PGAP3-211ENST00000619169 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
PGAP3-211ENST00000619169 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.56■■□□□ 1.36
PGAP3-211ENST00000619169 STAC3Q96MF2 364 aa23.56■■□□□ 1.36
PGAP3-211ENST00000619169 VGFO15240 615 aaPredicted RBP23.55■■□□□ 1.36
PGAP3-211ENST00000619169 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
PGAP3-211ENST00000619169 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
PGAP3-211ENST00000619169 ANKLE2Q86XL3 938 aa23.54■■□□□ 1.36
PGAP3-211ENST00000619169 EID1Q9Y6B2 187 aa23.54■■□□□ 1.36
PGAP3-211ENST00000619169 PPP1R15AO75807 674 aaPredicted RBP23.53■■□□□ 1.36
PGAP3-211ENST00000619169 PRAG1Q86YV5 1406 aa23.53■■□□□ 1.36
PGAP3-211ENST00000619169 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
PGAP3-211ENST00000619169 NCKAP5LQ9HCH0 1330 aa23.51■■□□□ 1.35
PGAP3-211ENST00000619169 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
PGAP3-211ENST00000619169 PLEKHG1Q9ULL1 1385 aa23.51■■□□□ 1.35
PGAP3-211ENST00000619169 MED14O60244 1454 aa23.51■■□□□ 1.35
PGAP3-211ENST00000619169 STRCQ7RTU9 1775 aa23.51■■□□□ 1.35
PGAP3-211ENST00000619169 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
PGAP3-211ENST00000619169 NRXN3Q9Y4C0 1643 aa23.5■■□□□ 1.35
PGAP3-211ENST00000619169 SETBP1Q9Y6X0 1596 aa23.48■■□□□ 1.35
PGAP3-211ENST00000619169 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
PGAP3-211ENST00000619169 ADAMTS13Q76LX8 1427 aa23.46■■□□□ 1.35
PGAP3-211ENST00000619169 NPHP4O75161 1426 aaPredicted RBP23.45■■□□□ 1.35
PGAP3-211ENST00000619169 IQGAP1P46940 1657 aa23.45■■□□□ 1.34
PGAP3-211ENST00000619169 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
PGAP3-211ENST00000619169 CFAP70Q5T0N1 1121 aa23.43■■□□□ 1.34
PGAP3-211ENST00000619169 ALKQ9UM73 1620 aa23.43■■□□□ 1.34
PGAP3-211ENST00000619169 SETD1AO15047 1707 aaKnown RBP23.43■■□□□ 1.34
PGAP3-211ENST00000619169 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
PGAP3-211ENST00000619169 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
PGAP3-211ENST00000619169 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
PGAP3-211ENST00000619169 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.33
PGAP3-211ENST00000619169 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
PGAP3-211ENST00000619169 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
PGAP3-211ENST00000619169 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
PGAP3-211ENST00000619169 RALGAPBQ86X10 1494 aa23.38■■□□□ 1.33
PGAP3-211ENST00000619169 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
PGAP3-211ENST00000619169 LAMC1P11047 1609 aa23.37■■□□□ 1.33
PGAP3-211ENST00000619169 BCANQ96GW7 911 aa23.37■■□□□ 1.33
PGAP3-211ENST00000619169 METP08581 1390 aa23.37■■□□□ 1.33
PGAP3-211ENST00000619169 DIP2AQ14689 1571 aa23.36■■□□□ 1.33
PGAP3-211ENST00000619169 GPRASP1Q5JY77 1395 aa23.34■■□□□ 1.33
PGAP3-211ENST00000619169 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
PGAP3-211ENST00000619169 PTPRUQ92729 1446 aa23.31■■□□□ 1.32
PGAP3-211ENST00000619169 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
PGAP3-211ENST00000619169 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
PGAP3-211ENST00000619169 PIK3R4Q99570 1358 aa23.29■■□□□ 1.32
PGAP3-211ENST00000619169 YTHDC2Q9H6S0 1430 aaKnown RBP23.27■■□□□ 1.32
PGAP3-211ENST00000619169 CHD2O14647 1828 aaKnown RBP23.25■■□□□ 1.31
PGAP3-211ENST00000619169 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
PGAP3-211ENST00000619169 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
PGAP3-211ENST00000619169 XRN1Q8IZH2 1706 aaKnown RBP23.23■■□□□ 1.31
PGAP3-211ENST00000619169 ABCC11Q96J66 1382 aa23.23■■□□□ 1.31
PGAP3-211ENST00000619169 TECPR2O15040 1411 aa23.23■■□□□ 1.31
PGAP3-211ENST00000619169 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
PGAP3-211ENST00000619169 NWD1Q149M9 1564 aa23.22■■□□□ 1.31
PGAP3-211ENST00000619169 STK26Q9P289 416 aa23.21■■□□□ 1.31
PGAP3-211ENST00000619169 STRCP1A6NGW2 1772 aa23.21■■□□□ 1.31
PGAP3-211ENST00000619169 KCNA6P17658 529 aa23.21■■□□□ 1.31
PGAP3-211ENST00000619169 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
PGAP3-211ENST00000619169 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
PGAP3-211ENST00000619169 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
PGAP3-211ENST00000619169 CPS1P31327 1500 aa23.18■■□□□ 1.3
PGAP3-211ENST00000619169 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
PGAP3-211ENST00000619169 ROBO2Q9HCK4 1378 aa23.18■■□□□ 1.3
PGAP3-211ENST00000619169 PTCH1Q13635 1447 aa23.17■■□□□ 1.3
PGAP3-211ENST00000619169 ARHGEF28Q8N1W1 1705 aaKnown RBP23.17■■□□□ 1.3
PGAP3-211ENST00000619169 USP47Q96K76 1375 aa23.16■■□□□ 1.3
PGAP3-211ENST00000619169 SIRT1Q96EB6 747 aa23.15■■□□□ 1.3
PGAP3-211ENST00000619169 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
PGAP3-211ENST00000619169 PLEKHH1Q9ULM0 1364 aa23.13■■□□□ 1.29
PGAP3-211ENST00000619169 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
PGAP3-211ENST00000619169 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
PGAP3-211ENST00000619169 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
PGAP3-211ENST00000619169 LTBP4Q8N2S1 1624 aa23.1■■□□□ 1.29
PGAP3-211ENST00000619169 ST20-MTHFSA0A0A6YYL1 179 aa23.09■■□□□ 1.29
PGAP3-211ENST00000619169 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
PGAP3-211ENST00000619169 HSPA5P11021 654 aaKnown RBP23.09■■□□□ 1.29
PGAP3-211ENST00000619169 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.297e-9■■■■□ 20.6
PGAP3-211ENST00000619169 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
PGAP3-211ENST00000619169 RBM33Q96EV2 1170 aaKnown RBP23.07■■□□□ 1.28
PGAP3-211ENST00000619169 LRRC7Q96NW7 1537 aa23.06■■□□□ 1.28
PGAP3-211ENST00000619169 TESK2Q96S53 571 aa23.06■■□□□ 1.28
PGAP3-211ENST00000619169 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
PGAP3-211ENST00000619169 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
PGAP3-211ENST00000619169 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
PGAP3-211ENST00000619169 POGKQ9P215 609 aa23.05■■□□□ 1.28
PGAP3-211ENST00000619169 HIRIP3Q9BW71 556 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms