RNA–Protein interactions for RNA: ENST00000619169.4

PGAP3-211, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,094 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-211ENST00000619169 NISCHQ9Y2I1 1504 aa38.83■■■■□ 3.81
PGAP3-211ENST00000619169 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
PGAP3-211ENST00000619169 ABCC9O60706 1549 aa32.97■■■□□ 2.87
PGAP3-211ENST00000619169 ZCCHC6Q5VYS8 1495 aaKnown RBP32.47■■■□□ 2.79
PGAP3-211ENST00000619169 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
PGAP3-211ENST00000619169 DCAF1Q9Y4B6 1507 aa32.14■■■□□ 2.74
PGAP3-211ENST00000619169 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
PGAP3-211ENST00000619169 NACADO15069 1562 aa32.04■■■□□ 2.72
PGAP3-211ENST00000619169 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
PGAP3-211ENST00000619169 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
PGAP3-211ENST00000619169 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
PGAP3-211ENST00000619169 BICRAQ9NZM4 1560 aa31.03■■■□□ 2.56
PGAP3-211ENST00000619169 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
PGAP3-211ENST00000619169 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
PGAP3-211ENST00000619169 CECR2Q9BXF3 1484 aa30.23■■■□□ 2.43
PGAP3-211ENST00000619169 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
PGAP3-211ENST00000619169 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
PGAP3-211ENST00000619169 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
PGAP3-211ENST00000619169 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
PGAP3-211ENST00000619169 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
PGAP3-211ENST00000619169 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
PGAP3-211ENST00000619169 RSF1Q96T23 1441 aaPredicted RBP29.83■■■□□ 2.37
PGAP3-211ENST00000619169 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
PGAP3-211ENST00000619169 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
PGAP3-211ENST00000619169 WIZO95785 1651 aa29.64■■■□□ 2.34
PGAP3-211ENST00000619169 SMARCA2P51531 1590 aa29.64■■■□□ 2.34
PGAP3-211ENST00000619169 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
PGAP3-211ENST00000619169 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
PGAP3-211ENST00000619169 BAZ1BQ9UIG0 1483 aaKnown RBP29.45■■■□□ 2.31
PGAP3-211ENST00000619169 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
PGAP3-211ENST00000619169 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
PGAP3-211ENST00000619169 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
PGAP3-211ENST00000619169 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.19
PGAP3-211ENST00000619169 NESP48681 1621 aa28.74■■■□□ 2.19
PGAP3-211ENST00000619169 CFTRP13569 1480 aa28.72■■■□□ 2.19
PGAP3-211ENST00000619169 LAMC3Q9Y6N6 1575 aa28.69■■■□□ 2.18
PGAP3-211ENST00000619169 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
PGAP3-211ENST00000619169 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
PGAP3-211ENST00000619169 FANCD2Q9BXW9 1451 aa28.42■■■□□ 2.14
PGAP3-211ENST00000619169 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
PGAP3-211ENST00000619169 ERCC6Q03468 1493 aa28.31■■■□□ 2.12
PGAP3-211ENST00000619169 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
PGAP3-211ENST00000619169 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
PGAP3-211ENST00000619169 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
PGAP3-211ENST00000619169 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
PGAP3-211ENST00000619169 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
PGAP3-211ENST00000619169 WDR62O43379 1518 aa28.06■■■□□ 2.08
PGAP3-211ENST00000619169 CUX1P39880 1505 aa28.06■■■□□ 2.08
PGAP3-211ENST00000619169 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
PGAP3-211ENST00000619169 TOPBP1Q92547 1522 aa28.04■■■□□ 2.08
PGAP3-211ENST00000619169 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
PGAP3-211ENST00000619169 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
PGAP3-211ENST00000619169 TOP2BQ02880 1626 aa27.94■■■□□ 2.06
PGAP3-211ENST00000619169 BIVM-ERCC5R4GMW8 1640 aa27.93■■■□□ 2.06
PGAP3-211ENST00000619169 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
PGAP3-211ENST00000619169 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
PGAP3-211ENST00000619169 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
PGAP3-211ENST00000619169 CUX2O14529 1486 aa27.83■■■□□ 2.05
PGAP3-211ENST00000619169 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
PGAP3-211ENST00000619169 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
PGAP3-211ENST00000619169 SOGA1O94964 1423 aa27.72■■■□□ 2.03
PGAP3-211ENST00000619169 TARBP1Q13395 1621 aaKnown RBP27.71■■■□□ 2.03
PGAP3-211ENST00000619169 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
PGAP3-211ENST00000619169 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
PGAP3-211ENST00000619169 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
PGAP3-211ENST00000619169 ZNF608Q9ULD9 1512 aaPredicted RBP27.58■■■□□ 2.01
PGAP3-211ENST00000619169 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
PGAP3-211ENST00000619169 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.99
PGAP3-211ENST00000619169 EIF4G3O43432 1585 aaKnown RBP27.45■■□□□ 1.99
PGAP3-211ENST00000619169 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.99
PGAP3-211ENST00000619169 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
PGAP3-211ENST00000619169 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
PGAP3-211ENST00000619169 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
PGAP3-211ENST00000619169 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
PGAP3-211ENST00000619169 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
PGAP3-211ENST00000619169 IGF1RP08069 1367 aa27.29■■□□□ 1.96
PGAP3-211ENST00000619169 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
PGAP3-211ENST00000619169 EEA1Q15075 1411 aa27.24■■□□□ 1.95
PGAP3-211ENST00000619169 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
PGAP3-211ENST00000619169 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.94
PGAP3-211ENST00000619169 MAGI1Q96QZ7 1491 aaPredicted RBP27.18■■□□□ 1.94
PGAP3-211ENST00000619169 CSRNP3Q8WYN3 585 aa27.16■■□□□ 1.94
PGAP3-211ENST00000619169 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
PGAP3-211ENST00000619169 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
PGAP3-211ENST00000619169 CUL7Q14999 1698 aa27.1■■□□□ 1.93
PGAP3-211ENST00000619169 CARMIL1Q5VZK9 1371 aa27.1■■□□□ 1.93
PGAP3-211ENST00000619169 PRXQ9BXM0 1461 aa27.08■■□□□ 1.93
PGAP3-211ENST00000619169 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
PGAP3-211ENST00000619169 CHMP7Q8WUX9 453 aaPredicted RBP26.99■■□□□ 1.91
PGAP3-211ENST00000619169 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
PGAP3-211ENST00000619169 GRIN2AQ12879 1464 aa26.98■■□□□ 1.91
PGAP3-211ENST00000619169 CHD1O14646 1710 aa26.98■■□□□ 1.91
PGAP3-211ENST00000619169 FBLN2P98095 1184 aa26.97■■□□□ 1.91
PGAP3-211ENST00000619169 KIF21BO75037 1637 aa26.95■■□□□ 1.9
PGAP3-211ENST00000619169 NUP160Q12769 1436 aa26.86■■□□□ 1.89
PGAP3-211ENST00000619169 CEP170Q5SW79 1584 aa26.85■■□□□ 1.89
PGAP3-211ENST00000619169 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
PGAP3-211ENST00000619169 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
PGAP3-211ENST00000619169 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
PGAP3-211ENST00000619169 LOC105371045A0A1W2PR82 267 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms