RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
NR1H3-235ENST00000616973 BRD4O60885 1362 aaPredicted RBP21.43■■□□□ 1.02
NR1H3-235ENST00000616973 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
NR1H3-235ENST00000616973 MYBBP1AQ9BQG0 1328 aaKnown RBP21.43■■□□□ 1.02
NR1H3-235ENST00000616973 PER1O15534 1290 aaPredicted RBP21.43■■□□□ 1.02
NR1H3-235ENST00000616973 PIK3C2BO00750 1634 aa21.43■■□□□ 1.02
NR1H3-235ENST00000616973 EIF3AQ14152 1382 aaKnown RBP21.42■■□□□ 1.02
NR1H3-235ENST00000616973 GGT6Q6P531 493 aa21.42■■□□□ 1.02
NR1H3-235ENST00000616973 PARD3Q8TEW0 1356 aa21.42■■□□□ 1.02
NR1H3-235ENST00000616973 NEFLP07196 543 aa21.41■■□□□ 1.02
NR1H3-235ENST00000616973 NOS1P29475 1434 aa21.41■■□□□ 1.02
NR1H3-235ENST00000616973 ARHGAP31Q2M1Z3 1444 aa21.41■■□□□ 1.02
NR1H3-235ENST00000616973 SETBP1Q9Y6X0 1596 aa21.4■■□□□ 1.02
NR1H3-235ENST00000616973 FKBP8Q14318 412 aa21.4■■□□□ 1.02
NR1H3-235ENST00000616973 MYO3AQ8NEV4 1616 aa21.39■■□□□ 1.01
NR1H3-235ENST00000616973 SYNMO15061 1565 aa21.39■■□□□ 1.01
NR1H3-235ENST00000616973 PNISRQ8TF01 805 aaKnown RBP21.38■■□□□ 1.01
NR1H3-235ENST00000616973 CDCA8Q53HL2 280 aa21.37■■□□□ 1.01
NR1H3-235ENST00000616973 ADGRF5Q8IZF2 1346 aa21.37■■□□□ 1.01
NR1H3-235ENST00000616973 YEATS2Q9ULM3 1422 aa21.37■■□□□ 1.01
NR1H3-235ENST00000616973 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
NR1H3-235ENST00000616973 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
NR1H3-235ENST00000616973 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
NR1H3-235ENST00000616973 SLC24A1O60721 1099 aa21.36■■□□□ 1.01
NR1H3-235ENST00000616973 RPGRIP1LQ68CZ1 1315 aa21.36■■□□□ 1.01
NR1H3-235ENST00000616973 MYOM1P52179 1685 aa21.36■■□□□ 1.01
NR1H3-235ENST00000616973 TSPOAP1O95153 1857 aa21.35■■□□□ 1.01
NR1H3-235ENST00000616973 REREQ9P2R6 1566 aa21.35■■□□□ 1.01
NR1H3-235ENST00000616973 CNGB1Q14028 1251 aaPredicted RBP21.33■■□□□ 1.01
NR1H3-235ENST00000616973 PANK3Q9H999 370 aa21.33■■□□□ 1.01
NR1H3-235ENST00000616973 CFAP70Q5T0N1 1121 aa21.33■■□□□ 1
NR1H3-235ENST00000616973 PIK3C2GO75747 1445 aa21.32■■□□□ 1
NR1H3-235ENST00000616973 FAM69CQ0P6D2 419 aa21.32■■□□□ 1
NR1H3-235ENST00000616973 NLRP13Q86W25 1043 aa21.32■■□□□ 1
NR1H3-235ENST00000616973 PREX1Q8TCU6 1659 aa21.3■■□□□ 1
NR1H3-235ENST00000616973 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
NR1H3-235ENST00000616973 AGLP35573 1532 aa21.28■■□□□ 1
NR1H3-235ENST00000616973 NEXMIFQ5QGS0 1516 aa21.27■■□□□ 1
NR1H3-235ENST00000616973 KIF13AQ9H1H9 1805 aa21.27■■□□□ 1
NR1H3-235ENST00000616973 ADGRB1O14514 1584 aa21.26■□□□□ 0.99
NR1H3-235ENST00000616973 ERVK-7P63135 1459 aa21.26■□□□□ 0.99
NR1H3-235ENST00000616973 CHGAP10645 457 aaKnown RBP21.26■□□□□ 0.99
NR1H3-235ENST00000616973 C14orf93Q9H972 538 aaKnown RBP21.26■□□□□ 0.99
NR1H3-235ENST00000616973 SMG6Q86US8 1419 aaKnown RBP21.26■□□□□ 0.99
NR1H3-235ENST00000616973 INSRP06213 1382 aa21.26■□□□□ 0.99
NR1H3-235ENST00000616973 MYO5BQ9ULV0 1848 aa21.24■□□□□ 0.99
NR1H3-235ENST00000616973 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
NR1H3-235ENST00000616973 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
NR1H3-235ENST00000616973 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
NR1H3-235ENST00000616973 QRICH2Q9H0J4 1663 aa21.23■□□□□ 0.99
NR1H3-235ENST00000616973 SLC52A1Q9NWF4 448 aa21.23■□□□□ 0.99
NR1H3-235ENST00000616973 ZFYVE9O95405 1425 aa21.22■□□□□ 0.99
NR1H3-235ENST00000616973 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
NR1H3-235ENST00000616973 TMEM131LA2VDJ0 1609 aa21.21■□□□□ 0.99
NR1H3-235ENST00000616973 BCANQ96GW7 911 aa21.21■□□□□ 0.99
NR1H3-235ENST00000616973 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
NR1H3-235ENST00000616973 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
NR1H3-235ENST00000616973 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
NR1H3-235ENST00000616973 AMER1Q5JTC6 1135 aaPredicted RBP21.18■□□□□ 0.98
NR1H3-235ENST00000616973 ARHGEF28Q8N1W1 1705 aaKnown RBP21.18■□□□□ 0.98
NR1H3-235ENST00000616973 CENPJQ9HC77 1338 aaPredicted RBP21.17■□□□□ 0.98
NR1H3-235ENST00000616973 NUDCQ9Y266 331 aa21.17■□□□□ 0.98
NR1H3-235ENST00000616973 IDI1Q13907 227 aa21.16■□□□□ 0.98
NR1H3-235ENST00000616973 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
NR1H3-235ENST00000616973 CLTCQ00610 1675 aaKnown RBP21.14■□□□□ 0.98
NR1H3-235ENST00000616973 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.97
NR1H3-235ENST00000616973 TRAK1Q9UPV9 953 aa21.1■□□□□ 0.97
NR1H3-235ENST00000616973 PPP2R1AP30153 589 aa21.1■□□□□ 0.97
NR1H3-235ENST00000616973 SPATA31D1Q6ZQQ2 1576 aa21.09■□□□□ 0.97
NR1H3-235ENST00000616973 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
NR1H3-235ENST00000616973 PUS7Q96PZ0 661 aaKnown RBP21.09■□□□□ 0.97
NR1H3-235ENST00000616973 PDE3BQ13370 1112 aa21.08■□□□□ 0.96
NR1H3-235ENST00000616973 TMEM132EQ6IEE7 984 aa21.08■□□□□ 0.96
NR1H3-235ENST00000616973 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
NR1H3-235ENST00000616973 MYT1Q01538 1121 aa21.07■□□□□ 0.96
NR1H3-235ENST00000616973 IRX6P78412 446 aaPredicted RBP21.05■□□□□ 0.96
NR1H3-235ENST00000616973 PPP4R2Q9NY27 417 aa21.04■□□□□ 0.96
NR1H3-235ENST00000616973 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
NR1H3-235ENST00000616973 CARD14Q9BXL6 1004 aa21.03■□□□□ 0.96
NR1H3-235ENST00000616973 TULP4Q9NRJ4 1543 aa21.03■□□□□ 0.96
NR1H3-235ENST00000616973 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.95
NR1H3-235ENST00000616973 TSHZ2Q9NRE2 1034 aa21.01■□□□□ 0.95
NR1H3-235ENST00000616973 ALKQ9UM73 1620 aa21■□□□□ 0.95
NR1H3-235ENST00000616973 EVC2Q86UK5 1308 aa20.99■□□□□ 0.95
NR1H3-235ENST00000616973 A2ML1A8K2U0 1454 aa20.98■□□□□ 0.95
NR1H3-235ENST00000616973 PTPRMP28827 1452 aa20.98■□□□□ 0.95
NR1H3-235ENST00000616973 ADAMTS8Q9UP79 889 aa20.97■□□□□ 0.95
NR1H3-235ENST00000616973 SETD1AO15047 1707 aaKnown RBP20.96■□□□□ 0.95
NR1H3-235ENST00000616973 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
NR1H3-235ENST00000616973 NSD3Q9BZ95 1437 aa20.96■□□□□ 0.95
NR1H3-235ENST00000616973 SENP3-EIF4A1A0A087X0R7 540 aa20.95■□□□□ 0.94
NR1H3-235ENST00000616973 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
NR1H3-235ENST00000616973 NINLQ9Y2I6 1382 aa20.94■□□□□ 0.94
NR1H3-235ENST00000616973 SLC12A5Q9H2X9 1139 aa20.93■□□□□ 0.94
NR1H3-235ENST00000616973 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
NR1H3-235ENST00000616973 ANKRD36BQ8N2N9 1353 aa20.92■□□□□ 0.94
NR1H3-235ENST00000616973 DLC1Q96QB1 1528 aa20.92■□□□□ 0.94
NR1H3-235ENST00000616973 POLR3AO14802 1390 aaPredicted RBP20.91■□□□□ 0.94
NR1H3-235ENST00000616973 RIMS2Q9UQ26 1411 aa20.9■□□□□ 0.94
NR1H3-235ENST00000616973 NSD2O96028 1365 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms