RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
GABPB1-212ENST00000615671 TPM2P07951 284 aa22.99■■□□□ 1.27
GABPB1-212ENST00000615671 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
GABPB1-212ENST00000615671 TNNT3P45378 269 aaPredicted RBP22.98■■□□□ 1.27
GABPB1-212ENST00000615671 IFIT2P09913 472 aaKnown RBP22.98■■□□□ 1.27
GABPB1-212ENST00000615671 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
GABPB1-212ENST00000615671 EVC2Q86UK5 1308 aa22.98■■□□□ 1.27
GABPB1-212ENST00000615671 TRIM29Q14134 588 aa22.98■■□□□ 1.27
GABPB1-212ENST00000615671 CCDC27Q2M243 656 aa22.98■■□□□ 1.27
GABPB1-212ENST00000615671 ZNF428Q96B54 188 aa22.97■■□□□ 1.27
GABPB1-212ENST00000615671 CGNL1Q0VF96 1302 aa22.96■■□□□ 1.27
GABPB1-212ENST00000615671 COG6Q9Y2V7 657 aa22.96■■□□□ 1.27
GABPB1-212ENST00000615671 CCDC144AA2RUR9 1427 aa22.96■■□□□ 1.27
GABPB1-212ENST00000615671 HMOX1P09601 288 aa22.95■■□□□ 1.26
GABPB1-212ENST00000615671 GOLGA6L19H0YKK7 550 aa22.95■■□□□ 1.26
GABPB1-212ENST00000615671 CCDC43Q96MW1 224 aaKnown RBP22.95■■□□□ 1.26
GABPB1-212ENST00000615671 PHF14O94880 888 aa22.94■■□□□ 1.26
GABPB1-212ENST00000615671 ATF3P18847 181 aa22.94■■□□□ 1.26
GABPB1-212ENST00000615671 ZNF592Q92610 1267 aa22.93■■□□□ 1.26
GABPB1-212ENST00000615671 BECN2A8MW95 431 aa22.93■■□□□ 1.26
GABPB1-212ENST00000615671 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
GABPB1-212ENST00000615671 FKBP5Q13451 457 aaPredicted RBP22.92■■□□□ 1.26
GABPB1-212ENST00000615671 VGFO15240 615 aaPredicted RBP22.92■■□□□ 1.26
GABPB1-212ENST00000615671 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
GABPB1-212ENST00000615671 KIF15Q9NS87 1388 aa22.91■■□□□ 1.26
GABPB1-212ENST00000615671 CPLX1O14810 134 aa22.91■■□□□ 1.26
GABPB1-212ENST00000615671 NEUROD6Q96NK8 337 aa22.91■■□□□ 1.26
GABPB1-212ENST00000615671 CRBNQ96SW2 442 aa22.91■■□□□ 1.26
GABPB1-212ENST00000615671 ZKSCAN2Q63HK3 967 aa22.91■■□□□ 1.26
GABPB1-212ENST00000615671 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
GABPB1-212ENST00000615671 RIPK4P57078 832 aa22.9■■□□□ 1.26
GABPB1-212ENST00000615671 NLRP2Q9NX02 1062 aa22.9■■□□□ 1.26
GABPB1-212ENST00000615671 MYBBP1AQ9BQG0 1328 aaKnown RBP22.89■■□□□ 1.25
GABPB1-212ENST00000615671 DIAPH1O60610 1272 aaKnown RBP22.88■■□□□ 1.25
GABPB1-212ENST00000615671 G3BP1Q13283 466 aaKnown RBP eCLIP22.88■■□□□ 1.25
GABPB1-212ENST00000615671 ERICH2A1L162 156 aa22.88■■□□□ 1.25
GABPB1-212ENST00000615671 RIC3Q7Z5B4 369 aa22.88■■□□□ 1.25
GABPB1-212ENST00000615671 DDX49Q9Y6V7 483 aaKnown RBP22.87■■□□□ 1.25
GABPB1-212ENST00000615671 APAF1O14727 1248 aa22.87■■□□□ 1.25
GABPB1-212ENST00000615671 IPO9Q96P70 1041 aaKnown RBP22.87■■□□□ 1.25
GABPB1-212ENST00000615671 TSPYL4Q9UJ04 414 aa22.87■■□□□ 1.25
GABPB1-212ENST00000615671 TPM1P09493 284 aa22.86■■□□□ 1.25
GABPB1-212ENST00000615671 IKQ13123 557 aaPredicted RBP22.86■■□□□ 1.25
GABPB1-212ENST00000615671 TRDNQ13061 729 aa22.86■■□□□ 1.25
GABPB1-212ENST00000615671 EXOC6Q8TAG9 804 aa22.86■■□□□ 1.25
GABPB1-212ENST00000615671 DDX58O95786 925 aaKnown RBP22.86■■□□□ 1.25
GABPB1-212ENST00000615671 RAPGEF4Q8WZA2 1011 aa22.85■■□□□ 1.25
GABPB1-212ENST00000615671 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
GABPB1-212ENST00000615671 WASHC4Q2M389 1173 aa22.85■■□□□ 1.25
GABPB1-212ENST00000615671 LRRFIP1Q32MZ4 808 aaKnown RBP22.84■■□□□ 1.25
GABPB1-212ENST00000615671 NUTM2BA6NNL0 878 aaPredicted RBP22.84■■□□□ 1.25
GABPB1-212ENST00000615671 NUTM2EB1AL46 878 aaPredicted RBP22.84■■□□□ 1.25
GABPB1-212ENST00000615671 NUTM2AQ8IVF1 878 aaPredicted RBP22.84■■□□□ 1.25
GABPB1-212ENST00000615671 CPLX2Q6PUV4 134 aaKnown RBP22.84■■□□□ 1.25
GABPB1-212ENST00000615671 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
GABPB1-212ENST00000615671 STRN4Q9NRL3 753 aa22.83■■□□□ 1.25
GABPB1-212ENST00000615671 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.83■■□□□ 1.25
GABPB1-212ENST00000615671 BICD2Q8TD16 824 aa22.82■■□□□ 1.24
GABPB1-212ENST00000615671 RUFY2Q8WXA3 655 aa22.82■■□□□ 1.24
GABPB1-212ENST00000615671 ZKSCAN1P17029 563 aaPredicted RBP22.81■■□□□ 1.24
GABPB1-212ENST00000615671 RBM42Q9BTD8 480 aaKnown RBP22.81■■□□□ 1.24
GABPB1-212ENST00000615671 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
GABPB1-212ENST00000615671 VPS37CA5D8V6 355 aaPredicted RBP22.81■■□□□ 1.24
GABPB1-212ENST00000615671 NAP1L1P55209 391 aaKnown RBP22.81■■□□□ 1.24
GABPB1-212ENST00000615671 RSPH4AQ5TD94 716 aa22.81■■□□□ 1.24
GABPB1-212ENST00000615671 STK11IPQ8N1F8 1099 aa22.8■■□□□ 1.24
GABPB1-212ENST00000615671 CCDC47Q96A33 483 aaKnown RBP22.8■■□□□ 1.24
GABPB1-212ENST00000615671 E9PSI1 815 aa22.8■■□□□ 1.24
GABPB1-212ENST00000615671 CABP2Q9NPB3 220 aa22.8■■□□□ 1.24
GABPB1-212ENST00000615671 MROH2BQ7Z745 1585 aa22.79■■□□□ 1.24
GABPB1-212ENST00000615671 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
GABPB1-212ENST00000615671 DDX11L8A8MPP1 907 aa22.78■■□□□ 1.24
GABPB1-212ENST00000615671 OSCARQ8IYS5 282 aa22.78■■□□□ 1.24
GABPB1-212ENST00000615671 TMEM132AQ24JP5 1023 aa22.77■■□□□ 1.24
GABPB1-212ENST00000615671 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.24
GABPB1-212ENST00000615671 RAPGEF2Q9Y4G8 1499 aa22.77■■□□□ 1.24
GABPB1-212ENST00000615671 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.23
GABPB1-212ENST00000615671 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
GABPB1-212ENST00000615671 CENPQQ7L2Z9 268 aaPredicted RBP22.76■■□□□ 1.23
GABPB1-212ENST00000615671 PTPRGP23470 1445 aa22.76■■□□□ 1.23
GABPB1-212ENST00000615671 FAM161AQ3B820 660 aa22.75■■□□□ 1.23
GABPB1-212ENST00000615671 ATP6V1DQ9Y5K8 247 aa22.75■■□□□ 1.23
GABPB1-212ENST00000615671 ZFYVE27Q5T4F4 411 aa22.75■■□□□ 1.23
GABPB1-212ENST00000615671 ESCO1Q5FWF5 840 aa22.75■■□□□ 1.23
GABPB1-212ENST00000615671 CT47A1Q5JQC4 288 aaPredicted RBP22.74■■□□□ 1.23
GABPB1-212ENST00000615671 TMEM132EQ6IEE7 984 aa22.74■■□□□ 1.23
GABPB1-212ENST00000615671 CCDC70Q6NSX1 233 aa22.74■■□□□ 1.23
GABPB1-212ENST00000615671 CCAR1Q8IX12 1150 aaKnown RBP22.73■■□□□ 1.23
GABPB1-212ENST00000615671 RRP1P56182 461 aaKnown RBP22.72■■□□□ 1.23
GABPB1-212ENST00000615671 PIP4K2BP78356 416 aa22.72■■□□□ 1.23
GABPB1-212ENST00000615671 USP47Q96K76 1375 aa22.72■■□□□ 1.23
GABPB1-212ENST00000615671 DNAJC2Q99543 621 aaKnown RBP22.72■■□□□ 1.23
GABPB1-212ENST00000615671 IPO7O95373 1038 aaKnown RBP22.71■■□□□ 1.23
GABPB1-212ENST00000615671 ANKRD20A12PQ8NF67 263 aa22.71■■□□□ 1.23
GABPB1-212ENST00000615671 NLRP6P59044 892 aa22.7■■□□□ 1.23
GABPB1-212ENST00000615671 ODF2Q5BJF6 829 aa22.7■■□□□ 1.23
GABPB1-212ENST00000615671 HOMER1Q86YM7 354 aa22.7■■□□□ 1.23
GABPB1-212ENST00000615671 PRDM2Q13029 1718 aa22.7■■□□□ 1.22
GABPB1-212ENST00000615671 DZIP1LQ8IYY4 767 aaKnown RBP22.7■■□□□ 1.22
GABPB1-212ENST00000615671 R3HCC1Q9Y3T6 440 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms