RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PIK3C2BO00750 1634 aa18.03■□□□□ 0.48
FOXN3-219ENST00000615335 DEKP35659 375 aaKnown RBP18.02■□□□□ 0.48
FOXN3-219ENST00000615335 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.47
FOXN3-219ENST00000615335 TNRQ92752 1358 aa18■□□□□ 0.47
FOXN3-219ENST00000615335 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
FOXN3-219ENST00000615335 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
FOXN3-219ENST00000615335 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
FOXN3-219ENST00000615335 NBPF8Q3BBV2 869 aa17.96■□□□□ 0.47
FOXN3-219ENST00000615335 FKBP8Q14318 412 aa17.96■□□□□ 0.46
FOXN3-219ENST00000615335 MYO5BQ9ULV0 1848 aa17.95■□□□□ 0.46
FOXN3-219ENST00000615335 TMEM131LA2VDJ0 1609 aa17.95■□□□□ 0.46
FOXN3-219ENST00000615335 BCANQ96GW7 911 aa17.94■□□□□ 0.46
FOXN3-219ENST00000615335 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
FOXN3-219ENST00000615335 NEFLP07196 543 aa17.93■□□□□ 0.46
FOXN3-219ENST00000615335 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
FOXN3-219ENST00000615335 PTPRMP28827 1452 aa17.92■□□□□ 0.46
FOXN3-219ENST00000615335 RPGRIP1LQ68CZ1 1315 aa17.92■□□□□ 0.46
FOXN3-219ENST00000615335 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
FOXN3-219ENST00000615335 NLRP1Q9C000 1473 aa17.91■□□□□ 0.46
FOXN3-219ENST00000615335 NUTM2DQ5VT03 806 aaPredicted RBP17.91■□□□□ 0.46
FOXN3-219ENST00000615335 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
FOXN3-219ENST00000615335 ANP32CO43423 234 aa17.9■□□□□ 0.46
FOXN3-219ENST00000615335 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
FOXN3-219ENST00000615335 A2ML1A8K2U0 1454 aa17.9■□□□□ 0.46
FOXN3-219ENST00000615335 IFT172Q9UG01 1749 aa17.9■□□□□ 0.46
FOXN3-219ENST00000615335 PPLO60437 1756 aa17.89■□□□□ 0.45
FOXN3-219ENST00000615335 ADGRF5Q8IZF2 1346 aa17.88■□□□□ 0.45
FOXN3-219ENST00000615335 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
FOXN3-219ENST00000615335 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
FOXN3-219ENST00000615335 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
FOXN3-219ENST00000615335 NEXMIFQ5QGS0 1516 aa17.87■□□□□ 0.45
FOXN3-219ENST00000615335 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
FOXN3-219ENST00000615335 KDM4FA0A1W2PPD8 638 aa17.87■□□□□ 0.45
FOXN3-219ENST00000615335 MYOM2P54296 1465 aa17.87■□□□□ 0.45
FOXN3-219ENST00000615335 UBR1Q8IWV7 1749 aa17.86■□□□□ 0.45
FOXN3-219ENST00000615335 KDM5AP29375 1690 aaKnown RBP17.85■□□□□ 0.45
FOXN3-219ENST00000615335 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.45
FOXN3-219ENST00000615335 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
FOXN3-219ENST00000615335 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
FOXN3-219ENST00000615335 TRPM1Q7Z4N2 1603 aa17.83■□□□□ 0.44
FOXN3-219ENST00000615335 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.44
FOXN3-219ENST00000615335 NBPF1Q3BBV0 1214 aa17.82■□□□□ 0.44
FOXN3-219ENST00000615335 THEMISQ8N1K5 641 aaPredicted RBP17.82■□□□□ 0.44
FOXN3-219ENST00000615335 CARD11Q9BXL7 1154 aa17.82■□□□□ 0.44
FOXN3-219ENST00000615335 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
FOXN3-219ENST00000615335 CEP170BQ9Y4F5 1589 aaPredicted RBP17.82■□□□□ 0.44
FOXN3-219ENST00000615335 NRXN1Q9ULB1 1477 aa17.81■□□□□ 0.44
FOXN3-219ENST00000615335 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
FOXN3-219ENST00000615335 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
FOXN3-219ENST00000615335 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
FOXN3-219ENST00000615335 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
FOXN3-219ENST00000615335 PIK3C2GO75747 1445 aa17.8■□□□□ 0.44
FOXN3-219ENST00000615335 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
FOXN3-219ENST00000615335 EID1Q9Y6B2 187 aa17.77■□□□□ 0.44
FOXN3-219ENST00000615335 TXNDC2Q86VQ3 553 aa17.77■□□□□ 0.43
FOXN3-219ENST00000615335 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.43
FOXN3-219ENST00000615335 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.43
FOXN3-219ENST00000615335 KIAA1210Q9ULL0 1709 aa17.76■□□□□ 0.43
FOXN3-219ENST00000615335 HSPA5P11021 654 aaKnown RBP17.76■□□□□ 0.43
FOXN3-219ENST00000615335 LTKP29376 864 aa17.75■□□□□ 0.43
FOXN3-219ENST00000615335 GPRASP1Q5JY77 1395 aa17.75■□□□□ 0.43
FOXN3-219ENST00000615335 SLIT1O75093 1534 aa17.74■□□□□ 0.43
FOXN3-219ENST00000615335 USP47Q96K76 1375 aa17.74■□□□□ 0.43
FOXN3-219ENST00000615335 ARHGAP23Q9P227 1491 aa17.73■□□□□ 0.43
FOXN3-219ENST00000615335 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
FOXN3-219ENST00000615335 LAMC1P11047 1609 aa17.71■□□□□ 0.42
FOXN3-219ENST00000615335 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
FOXN3-219ENST00000615335 ALKQ9UM73 1620 aa17.69■□□□□ 0.42
FOXN3-219ENST00000615335 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
FOXN3-219ENST00000615335 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
FOXN3-219ENST00000615335 PLEKHG1Q9ULL1 1385 aa17.68■□□□□ 0.42
FOXN3-219ENST00000615335 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
FOXN3-219ENST00000615335 CCDC136Q96JN2 1154 aa17.68■□□□□ 0.42
FOXN3-219ENST00000615335 IQGAP1P46940 1657 aa17.67■□□□□ 0.42
FOXN3-219ENST00000615335 ADGRB1O14514 1584 aa17.67■□□□□ 0.42
FOXN3-219ENST00000615335 NRXN3Q9Y4C0 1643 aa17.66■□□□□ 0.42
FOXN3-219ENST00000615335 WASHC2AQ641Q2 1341 aa17.66■□□□□ 0.42
FOXN3-219ENST00000615335 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
FOXN3-219ENST00000615335 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
FOXN3-219ENST00000615335 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
FOXN3-219ENST00000615335 STK26Q9P289 416 aa17.65■□□□□ 0.42
FOXN3-219ENST00000615335 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
FOXN3-219ENST00000615335 HSPA2P54652 639 aa17.63■□□□□ 0.41
FOXN3-219ENST00000615335 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
FOXN3-219ENST00000615335 SETD1AO15047 1707 aaKnown RBP17.62■□□□□ 0.41
FOXN3-219ENST00000615335 ADAMTS13Q76LX8 1427 aa17.62■□□□□ 0.41
FOXN3-219ENST00000615335 METP08581 1390 aa17.61■□□□□ 0.41
FOXN3-219ENST00000615335 NCKAP5LQ9HCH0 1330 aa17.61■□□□□ 0.41
FOXN3-219ENST00000615335 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
FOXN3-219ENST00000615335 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
FOXN3-219ENST00000615335 POLR1AO95602 1720 aaPredicted RBP17.59■□□□□ 0.41
FOXN3-219ENST00000615335 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.41
FOXN3-219ENST00000615335 NOP58Q9Y2X3 529 aaKnown RBP17.59■□□□□ 0.41
FOXN3-219ENST00000615335 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
FOXN3-219ENST00000615335 C11orf95C9JLR9 678 aaPredicted RBP17.58■□□□□ 0.41
FOXN3-219ENST00000615335 MED14O60244 1454 aa17.57■□□□□ 0.4
FOXN3-219ENST00000615335 TESK2Q96S53 571 aa17.57■□□□□ 0.4
FOXN3-219ENST00000615335 CENPJQ9HC77 1338 aaPredicted RBP17.57■□□□□ 0.4
FOXN3-219ENST00000615335 NPHP4O75161 1426 aaPredicted RBP17.57■□□□□ 0.4
FOXN3-219ENST00000615335 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms