RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 CPS1P31327 1500 aa26.95■■□□□ 1.9
SEMA3B-211ENST00000612509 KIF1BO60333 1816 aa26.95■■□□□ 1.9
SEMA3B-211ENST00000612509 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
SEMA3B-211ENST00000612509 FBXO41Q8TF61 875 aa26.91■■□□□ 1.9
SEMA3B-211ENST00000612509 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
SEMA3B-211ENST00000612509 PLEKHG1Q9ULL1 1385 aa26.89■■□□□ 1.9
SEMA3B-211ENST00000612509 FOXD1Q16676 465 aa26.88■■□□□ 1.89
SEMA3B-211ENST00000612509 PPP1R15AO75807 674 aaPredicted RBP26.87■■□□□ 1.89
SEMA3B-211ENST00000612509 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
SEMA3B-211ENST00000612509 HDGFP51858 240 aaKnown RBP26.85■■□□□ 1.89
SEMA3B-211ENST00000612509 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.85■■□□□ 1.89
SEMA3B-211ENST00000612509 CCDC144AA2RUR9 1427 aa26.82■■□□□ 1.88
SEMA3B-211ENST00000612509 DIP2AQ14689 1571 aa26.82■■□□□ 1.88
SEMA3B-211ENST00000612509 NWD1Q149M9 1564 aa26.82■■□□□ 1.88
SEMA3B-211ENST00000612509 NUTM2DQ5VT03 806 aaPredicted RBP26.81■■□□□ 1.88
SEMA3B-211ENST00000612509 ZNF326Q5BKZ1 582 aaKnown RBP26.8■■□□□ 1.88
SEMA3B-211ENST00000612509 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
SEMA3B-211ENST00000612509 ADAMTS13Q76LX8 1427 aa26.79■■□□□ 1.88
SEMA3B-211ENST00000612509 NRXN3Q9Y4C0 1643 aa26.79■■□□□ 1.88
SEMA3B-211ENST00000612509 HRCP23327 699 aa26.78■■□□□ 1.88
SEMA3B-211ENST00000612509 BCANQ96GW7 911 aa26.78■■□□□ 1.88
SEMA3B-211ENST00000612509 LRRC7Q96NW7 1537 aa26.78■■□□□ 1.88
SEMA3B-211ENST00000612509 SETBP1Q9Y6X0 1596 aa26.78■■□□□ 1.88
SEMA3B-211ENST00000612509 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
SEMA3B-211ENST00000612509 PPLO60437 1756 aa26.76■■□□□ 1.88
SEMA3B-211ENST00000612509 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
SEMA3B-211ENST00000612509 CHD2O14647 1828 aaKnown RBP26.73■■□□□ 1.87
SEMA3B-211ENST00000612509 SPATA31E1Q6ZUB1 1445 aa26.73■■□□□ 1.87
SEMA3B-211ENST00000612509 XIRP1Q702N8 1843 aaKnown RBP26.72■■□□□ 1.87
SEMA3B-211ENST00000612509 IFT172Q9UG01 1749 aa26.7■■□□□ 1.87
SEMA3B-211ENST00000612509 KCNA6P17658 529 aa26.69■■□□□ 1.86
SEMA3B-211ENST00000612509 TBX22Q9Y458 520 aa26.69■■□□□ 1.86
SEMA3B-211ENST00000612509 RPGRIP1LQ68CZ1 1315 aa26.67■■□□□ 1.86
SEMA3B-211ENST00000612509 PIK3R4Q99570 1358 aa26.66■■□□□ 1.86
SEMA3B-211ENST00000612509 ANKRD30BQ9BXX2 1392 aa26.65■■□□□ 1.86
SEMA3B-211ENST00000612509 SETD1AO15047 1707 aaKnown RBP26.65■■□□□ 1.86
SEMA3B-211ENST00000612509 UBAP1LF5GYI3 381 aa26.64■■□□□ 1.86
SEMA3B-211ENST00000612509 ALKQ9UM73 1620 aa26.64■■□□□ 1.85
SEMA3B-211ENST00000612509 XRN1Q8IZH2 1706 aaKnown RBP26.63■■□□□ 1.85
SEMA3B-211ENST00000612509 TMEM94Q12767 1356 aa26.61■■□□□ 1.85
SEMA3B-211ENST00000612509 VGFO15240 615 aaPredicted RBP26.61■■□□□ 1.85
SEMA3B-211ENST00000612509 PTPRUQ92729 1446 aa26.6■■□□□ 1.85
SEMA3B-211ENST00000612509 RGL3Q3MIN7 710 aa26.59■■□□□ 1.85
SEMA3B-211ENST00000612509 METP08581 1390 aa26.57■■□□□ 1.84
SEMA3B-211ENST00000612509 PROSER2Q86WR7 435 aaPredicted RBP26.56■■□□□ 1.84
SEMA3B-211ENST00000612509 TOM1O60784 492 aa26.55■■□□□ 1.84
SEMA3B-211ENST00000612509 MYOM2P54296 1465 aa26.54■■□□□ 1.84
SEMA3B-211ENST00000612509 TRIM26Q12899 539 aaPredicted RBP26.53■■□□□ 1.84
SEMA3B-211ENST00000612509 PIK3C2GO75747 1445 aa26.52■■□□□ 1.84
SEMA3B-211ENST00000612509 ADGRF5Q8IZF2 1346 aa26.52■■□□□ 1.84
SEMA3B-211ENST00000612509 RBM33Q96EV2 1170 aaKnown RBP26.52■■□□□ 1.84
SEMA3B-211ENST00000612509 AMOTL2Q9Y2J4 779 aa26.51■■□□□ 1.83
SEMA3B-211ENST00000612509 NRXN1Q9ULB1 1477 aa26.49■■□□□ 1.83
SEMA3B-211ENST00000612509 NCOA3Q9Y6Q9 1424 aa26.49■■□□□ 1.83
SEMA3B-211ENST00000612509 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
SEMA3B-211ENST00000612509 PIP4K2BP78356 416 aa26.48■■□□□ 1.83
SEMA3B-211ENST00000612509 MSH6P52701 1360 aa26.47■■□□□ 1.83
SEMA3B-211ENST00000612509 PRAG1Q86YV5 1406 aa26.47■■□□□ 1.83
SEMA3B-211ENST00000612509 ASXL1Q8IXJ9 1541 aa26.46■■□□□ 1.83
SEMA3B-211ENST00000612509 PTCH1Q13635 1447 aa26.46■■□□□ 1.83
SEMA3B-211ENST00000612509 LAMC1P11047 1609 aa26.46■■□□□ 1.83
SEMA3B-211ENST00000612509 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.43■■□□□ 1.82
SEMA3B-211ENST00000612509 NALCNQ8IZF0 1738 aa26.41■■□□□ 1.82
SEMA3B-211ENST00000612509 KNDC1Q76NI1 1749 aa26.4■■□□□ 1.82
SEMA3B-211ENST00000612509 C14orf37Q86TY3 774 aa26.39■■□□□ 1.82
SEMA3B-211ENST00000612509 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
SEMA3B-211ENST00000612509 ROBO1Q9Y6N7 1651 aa26.38■■□□□ 1.81
SEMA3B-211ENST00000612509 ROBO2Q9HCK4 1378 aa26.37■■□□□ 1.81
SEMA3B-211ENST00000612509 DCCP43146 1447 aa26.37■■□□□ 1.81
SEMA3B-211ENST00000612509 ADGRL3Q9HAR2 1447 aa26.37■■□□□ 1.81
SEMA3B-211ENST00000612509 TECPR2O15040 1411 aa26.35■■□□□ 1.81
SEMA3B-211ENST00000612509 LRPPRCP42704 1394 aaKnown RBP26.33■■□□□ 1.81
SEMA3B-211ENST00000612509 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
SEMA3B-211ENST00000612509 HSPA1LP34931 641 aa26.33■■□□□ 1.81
SEMA3B-211ENST00000612509 C19orf44Q9H6X5 657 aa26.33■■□□□ 1.81
SEMA3B-211ENST00000612509 DCAF11Q8TEB1 546 aa26.32■■□□□ 1.8
SEMA3B-211ENST00000612509 C14orf93Q9H972 538 aaKnown RBP26.32■■□□□ 1.8
SEMA3B-211ENST00000612509 YTHDC2Q9H6S0 1430 aaKnown RBP26.31■■□□□ 1.8
SEMA3B-211ENST00000612509 CADPS2Q86UW7 1296 aa26.3■■□□□ 1.8
SEMA3B-211ENST00000612509 ADGRB1O14514 1584 aa26.29■■□□□ 1.8
SEMA3B-211ENST00000612509 CFAP70Q5T0N1 1121 aa26.29■■□□□ 1.8
SEMA3B-211ENST00000612509 TMEM132EQ6IEE7 984 aa26.29■■□□□ 1.8
SEMA3B-211ENST00000612509 STAC3Q96MF2 364 aa26.29■■□□□ 1.8
SEMA3B-211ENST00000612509 ATF3P18847 181 aa26.28■■□□□ 1.8
SEMA3B-211ENST00000612509 KDM2AQ9Y2K7 1162 aa26.28■■□□□ 1.8
SEMA3B-211ENST00000612509 ABCC11Q96J66 1382 aa26.28■■□□□ 1.8
SEMA3B-211ENST00000612509 SLAIN2Q9P270 581 aa26.26■■□□□ 1.79
SEMA3B-211ENST00000612509 MST1RQ04912 1400 aa26.25■■□□□ 1.79
SEMA3B-211ENST00000612509 STK26Q9P289 416 aa26.25■■□□□ 1.79
SEMA3B-211ENST00000612509 CDC42BPGQ6DT37 1551 aa26.24■■□□□ 1.79
SEMA3B-211ENST00000612509 DLC1Q96QB1 1528 aa26.23■■□□□ 1.79
SEMA3B-211ENST00000612509 KIAA1210Q9ULL0 1709 aa26.22■■□□□ 1.79
SEMA3B-211ENST00000612509 SIN3AQ96ST3 1273 aa26.21■■□□□ 1.79
SEMA3B-211ENST00000612509 PLEKHH1Q9ULM0 1364 aa26.2■■□□□ 1.79
SEMA3B-211ENST00000612509 PHLPP1O60346 1717 aa26.2■■□□□ 1.79
SEMA3B-211ENST00000612509 AHDC1Q5TGY3 1603 aaPredicted RBP26.18■■□□□ 1.78
SEMA3B-211ENST00000612509 WAPLQ7Z5K2 1190 aa26.16■■□□□ 1.78
SEMA3B-211ENST00000612509 COL16A1Q07092 1604 aaPredicted RBP26.16■■□□□ 1.78
SEMA3B-211ENST00000612509 C1orf167Q5SNV9 1468 aa26.15■■□□□ 1.78
SEMA3B-211ENST00000612509 NHSL1Q5SYE7 1610 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms