RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
PCDHGA3-202ENST00000612467 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.61
PCDHGA3-202ENST00000612467 PLIN1O60240 522 aa18.83■□□□□ 0.61
PCDHGA3-202ENST00000612467 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.61
PCDHGA3-202ENST00000612467 CD109Q6YHK3 1445 aa18.83■□□□□ 0.6
PCDHGA3-202ENST00000612467 PPP2R1AP30153 589 aa18.83■□□□□ 0.6
PCDHGA3-202ENST00000612467 MROH2AA6NES4 1674 aa18.83■□□□□ 0.6
PCDHGA3-202ENST00000612467 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
PCDHGA3-202ENST00000612467 ANP32EQ9BTT0 268 aa18.82■□□□□ 0.6
PCDHGA3-202ENST00000612467 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
PCDHGA3-202ENST00000612467 RRP1P56182 461 aaKnown RBP18.81■□□□□ 0.6
PCDHGA3-202ENST00000612467 ABCA6Q8N139 1617 aa18.8■□□□□ 0.6
PCDHGA3-202ENST00000612467 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
PCDHGA3-202ENST00000612467 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
PCDHGA3-202ENST00000612467 ZNF518AQ6AHZ1 1483 aa18.79■□□□□ 0.6
PCDHGA3-202ENST00000612467 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
PCDHGA3-202ENST00000612467 NOS1P29475 1434 aa18.79■□□□□ 0.6
PCDHGA3-202ENST00000612467 TRAK1Q9UPV9 953 aa18.79■□□□□ 0.6
PCDHGA3-202ENST00000612467 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
PCDHGA3-202ENST00000612467 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
PCDHGA3-202ENST00000612467 FRMPD1Q5SYB0 1578 aa18.77■□□□□ 0.6
PCDHGA3-202ENST00000612467 MAP3K4Q9Y6R4 1608 aa18.77■□□□□ 0.59
PCDHGA3-202ENST00000612467 MYOM1P52179 1685 aa18.77■□□□□ 0.59
PCDHGA3-202ENST00000612467 KIF1BO60333 1816 aa18.76■□□□□ 0.59
PCDHGA3-202ENST00000612467 NPATQ14207 1427 aa18.76■□□□□ 0.59
PCDHGA3-202ENST00000612467 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
PCDHGA3-202ENST00000612467 BLMP54132 1417 aaPredicted RBP18.76■□□□□ 0.59
PCDHGA3-202ENST00000612467 POGZQ7Z3K3 1410 aa18.76■□□□□ 0.59
PCDHGA3-202ENST00000612467 ERVK-7P63135 1459 aa18.74■□□□□ 0.59
PCDHGA3-202ENST00000612467 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
PCDHGA3-202ENST00000612467 WDR43Q15061 677 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCDHGA3-202ENST00000612467 EIF3AQ14152 1382 aaKnown RBP18.73■□□□□ 0.59
PCDHGA3-202ENST00000612467 SKAP1Q86WV1 359 aa18.73■□□□□ 0.59
PCDHGA3-202ENST00000612467 SYNMO15061 1565 aa18.72■□□□□ 0.59
PCDHGA3-202ENST00000612467 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
PCDHGA3-202ENST00000612467 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
PCDHGA3-202ENST00000612467 ASXL1Q8IXJ9 1541 aa18.71■□□□□ 0.59
PCDHGA3-202ENST00000612467 MYOM2P54296 1465 aa18.7■□□□□ 0.58
PCDHGA3-202ENST00000612467 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
PCDHGA3-202ENST00000612467 STAC3Q96MF2 364 aa18.69■□□□□ 0.58
PCDHGA3-202ENST00000612467 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
PCDHGA3-202ENST00000612467 PDE3BQ13370 1112 aa18.69■□□□□ 0.58
PCDHGA3-202ENST00000612467 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
PCDHGA3-202ENST00000612467 KDM5AP29375 1690 aaKnown RBP18.69■□□□□ 0.58
PCDHGA3-202ENST00000612467 SLC12A5Q9H2X9 1139 aa18.68■□□□□ 0.58
PCDHGA3-202ENST00000612467 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
PCDHGA3-202ENST00000612467 CYB5RLQ6IPT4 315 aa18.67■□□□□ 0.58
PCDHGA3-202ENST00000612467 HECW2Q9P2P5 1572 aa18.67■□□□□ 0.58
PCDHGA3-202ENST00000612467 ADGRB3O60242 1522 aa18.67■□□□□ 0.58
PCDHGA3-202ENST00000612467 KIAA1210Q9ULL0 1709 aa18.66■□□□□ 0.58
PCDHGA3-202ENST00000612467 CENPJQ9HC77 1338 aaPredicted RBP18.66■□□□□ 0.58
PCDHGA3-202ENST00000612467 ZMYM4Q5VZL5 1548 aa18.66■□□□□ 0.58
PCDHGA3-202ENST00000612467 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
PCDHGA3-202ENST00000612467 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
PCDHGA3-202ENST00000612467 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
PCDHGA3-202ENST00000612467 LMTK2Q8IWU2 1503 aa18.65■□□□□ 0.58
PCDHGA3-202ENST00000612467 SIGLEC1Q9BZZ2 1709 aa18.65■□□□□ 0.58
PCDHGA3-202ENST00000612467 APAF1O14727 1248 aa18.64■□□□□ 0.57
PCDHGA3-202ENST00000612467 ABCC3O15438 1527 aa18.64■□□□□ 0.57
PCDHGA3-202ENST00000612467 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
PCDHGA3-202ENST00000612467 NRXN1Q9ULB1 1477 aa18.63■□□□□ 0.57
PCDHGA3-202ENST00000612467 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
PCDHGA3-202ENST00000612467 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
PCDHGA3-202ENST00000612467 DUSP27Q5VZP5 1158 aa18.62■□□□□ 0.57
PCDHGA3-202ENST00000612467 PIK3C2GO75747 1445 aa18.62■□□□□ 0.57
PCDHGA3-202ENST00000612467 STK26Q9P289 416 aa18.61■□□□□ 0.57
PCDHGA3-202ENST00000612467 IDI1Q13907 227 aa18.6■□□□□ 0.57
PCDHGA3-202ENST00000612467 PPLO60437 1756 aa18.6■□□□□ 0.57
PCDHGA3-202ENST00000612467 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
PCDHGA3-202ENST00000612467 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
PCDHGA3-202ENST00000612467 CFAP74Q9C0B2 1584 aa18.58■□□□□ 0.57
PCDHGA3-202ENST00000612467 ZNF521Q96K83 1311 aa18.58■□□□□ 0.57
PCDHGA3-202ENST00000612467 ADGRB1O14514 1584 aa18.58■□□□□ 0.56
PCDHGA3-202ENST00000612467 DIP2CQ9Y2E4 1556 aa18.58■□□□□ 0.56
PCDHGA3-202ENST00000612467 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.56
PCDHGA3-202ENST00000612467 GOLGA2Q08379 1002 aa18.58■□□□□ 0.56
PCDHGA3-202ENST00000612467 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
PCDHGA3-202ENST00000612467 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
PCDHGA3-202ENST00000612467 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
PCDHGA3-202ENST00000612467 QRICH2Q9H0J4 1663 aa18.56■□□□□ 0.56
PCDHGA3-202ENST00000612467 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
PCDHGA3-202ENST00000612467 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
PCDHGA3-202ENST00000612467 INSRP06213 1382 aa18.55■□□□□ 0.56
PCDHGA3-202ENST00000612467 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
PCDHGA3-202ENST00000612467 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
PCDHGA3-202ENST00000612467 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
PCDHGA3-202ENST00000612467 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
PCDHGA3-202ENST00000612467 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
PCDHGA3-202ENST00000612467 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
PCDHGA3-202ENST00000612467 NEO1Q92859 1461 aa18.52■□□□□ 0.56
PCDHGA3-202ENST00000612467 BCAR3O75815 825 aa18.52■□□□□ 0.56
PCDHGA3-202ENST00000612467 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
PCDHGA3-202ENST00000612467 RICTORQ6R327 1708 aa18.51■□□□□ 0.55
PCDHGA3-202ENST00000612467 FAM69CQ0P6D2 419 aa18.51■□□□□ 0.55
PCDHGA3-202ENST00000612467 GLI2P10070 1586 aa18.51■□□□□ 0.55
PCDHGA3-202ENST00000612467 MYO5BQ9ULV0 1848 aa18.5■□□□□ 0.55
PCDHGA3-202ENST00000612467 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
PCDHGA3-202ENST00000612467 NEXMIFQ5QGS0 1516 aa18.5■□□□□ 0.55
PCDHGA3-202ENST00000612467 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
PCDHGA3-202ENST00000612467 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms