RNA–Protein interactions for RNA: ENST00000612229.4

PTPRT-209, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 11,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-209ENST00000612229 NASPP49321 788 aaPredicted RBP8.45□□□□□ -1.06
PTPRT-209ENST00000612229 HOMER1Q86YM7 354 aa8.45□□□□□ -1.06
PTPRT-209ENST00000612229 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
PTPRT-209ENST00000612229 LETM1O95202 739 aaPredicted RBP8.45□□□□□ -1.06
PTPRT-209ENST00000612229 FAM184AQ8NB25 1140 aa8.45□□□□□ -1.06
PTPRT-209ENST00000612229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRT-209ENST00000612229 CREBRFQ8IUR6 639 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 PIP4K2AP48426 406 aaPredicted RBP8.44□□□□□ -1.06
PTPRT-209ENST00000612229 E9PSI1 815 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 TRIM21P19474 475 aaKnown RBP8.44□□□□□ -1.06
PTPRT-209ENST00000612229 FOXD4L1Q9NU39 408 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 TRIM29Q14134 588 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 G3V3G9 751 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 DCAF8Q5TAQ9 597 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 DESP17661 470 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 CNKSR2Q8WXI2 1034 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 RUFY2Q8WXA3 655 aa8.44□□□□□ -1.06
PTPRT-209ENST00000612229 KIAA0754O94854 1291 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 SPATA24Q86W54 205 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 SYNE3Q6ZMZ3 975 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 RRP9O43818 475 aaKnown RBP8.43□□□□□ -1.06
PTPRT-209ENST00000612229 CCDC18Q5T9S5 1454 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 EPS15P42566 896 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 PDS5BQ9NTI5 1447 aa8.43□□□□□ -1.06
PTPRT-209ENST00000612229 VPS53Q5VIR6 699 aa8.42□□□□□ -1.06
PTPRT-209ENST00000612229 UACAQ9BZF9 1416 aa8.42□□□□□ -1.06
PTPRT-209ENST00000612229 CCDC43Q96MW1 224 aaKnown RBP8.42□□□□□ -1.06
PTPRT-209ENST00000612229 IFT57Q9NWB7 429 aa8.42□□□□□ -1.06
PTPRT-209ENST00000612229 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
PTPRT-209ENST00000612229 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
PTPRT-209ENST00000612229 BRMS1Q9HCU9 246 aa8.42□□□□□ -1.06
PTPRT-209ENST00000612229 WWC2Q6AWC2 1192 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 CARMIL1Q5VZK9 1371 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
PTPRT-209ENST00000612229 WASHC2AQ641Q2 1341 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 SENP3Q9H4L4 574 aaPredicted RBP8.41□□□□□ -1.06
PTPRT-209ENST00000612229 NOL10Q9BSC4 688 aaKnown RBP8.41□□□□□ -1.06
PTPRT-209ENST00000612229 PKD2Q13563 968 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 GOLGA6L10A0A0M3HER8 536 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 ZKSCAN2Q63HK3 967 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 R3HCC1Q9Y3T6 440 aaKnown RBP8.41□□□□□ -1.06
PTPRT-209ENST00000612229 NOL8Q76FK4 1167 aaKnown RBP8.41□□□□□ -1.06
PTPRT-209ENST00000612229 CFAP57Q96MR6 1250 aa8.41□□□□□ -1.06
PTPRT-209ENST00000612229 ZKSCAN1P17029 563 aaPredicted RBP8.4□□□□□ -1.06
PTPRT-209ENST00000612229 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
PTPRT-209ENST00000612229 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
PTPRT-209ENST00000612229 CUX2O14529 1486 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 GBP2P32456 591 aaPredicted RBP8.4□□□□□ -1.06
PTPRT-209ENST00000612229 HSP90AB2PQ58FF8 381 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 TAF7LQ5H9L4 462 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 LMOD2Q6P5Q4 547 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 DNAI2Q9GZS0 605 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 EIF3JO75822 258 aaKnown RBP8.4□□□□□ -1.06
PTPRT-209ENST00000612229 DDX19BQ9UMR2 479 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 CUX1P39880 1505 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 SMARCE1Q969G3 411 aa8.4□□□□□ -1.06
PTPRT-209ENST00000612229 ANKRD45Q5TZF3 282 aa8.4□□□□□ -1.07
PTPRT-209ENST00000612229 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.07
PTPRT-209ENST00000612229 RNF20Q5VTR2 975 aa8.4□□□□□ -1.07
PTPRT-209ENST00000612229 POLR3GO15318 223 aaPredicted RBP8.39□□□□□ -1.07
PTPRT-209ENST00000612229 WIZO95785 1651 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 XBP1P17861 261 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 DDX11Q96FC9 970 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 STAMBPO95630 424 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 MBD3O95983 291 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 SEPT7Q16181 437 aaKnown RBP8.39□□□□□ -1.07
PTPRT-209ENST00000612229 NUP155O75694 1391 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 MCTP1Q6DN14 999 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 FAM107BQ9H098 131 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 TRHP20396 242 aaPredicted RBP8.39□□□□□ -1.07
PTPRT-209ENST00000612229 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
PTPRT-209ENST00000612229 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
PTPRT-209ENST00000612229 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
PTPRT-209ENST00000612229 CTDP1Q9Y5B0 961 aaPredicted RBP8.38□□□□□ -1.07
PTPRT-209ENST00000612229 ERLIN1O75477 346 aa8.38□□□□□ -1.07
PTPRT-209ENST00000612229 INTS3Q68E01 1043 aaKnown RBP8.38□□□□□ -1.07
PTPRT-209ENST00000612229 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
PTPRT-209ENST00000612229 CRBNQ96SW2 442 aa8.38□□□□□ -1.07
PTPRT-209ENST00000612229 ERICH2A1L162 156 aa8.38□□□□□ -1.07
PTPRT-209ENST00000612229 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
PTPRT-209ENST00000612229 CLASRPQ8N2M8 674 aaKnown RBP8.37□□□□□ -1.07
PTPRT-209ENST00000612229 SOGA1O94964 1423 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 TOP2AP11388 1531 aaKnown RBP8.37□□□□□ -1.07
PTPRT-209ENST00000612229 FYB1O15117 783 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 RILPL2Q969X0 211 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 SYCP1Q15431 976 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 BICD2Q8TD16 824 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 MCM3P25205 808 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 SLC4A10Q6U841 1118 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 OLFM4Q6UX06 510 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 CCDC73Q6ZRK6 1079 aa8.37□□□□□ -1.07
PTPRT-209ENST00000612229 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.37□□□□□ -1.07
PTPRT-209ENST00000612229 C22orf23Q9BZE7 217 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms