RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 SLC24A1O60721 1099 aa32.23■■■□□ 2.75
HOXA4-204ENST00000610970 SMG6Q86US8 1419 aaKnown RBP32.22■■■□□ 2.75
HOXA4-204ENST00000610970 NLRP13Q86W25 1043 aa32.22■■■□□ 2.75
HOXA4-204ENST00000610970 EIF3AQ14152 1382 aaKnown RBP32.21■■■□□ 2.75
HOXA4-204ENST00000610970 TSPOAP1O95153 1857 aa32.21■■■□□ 2.75
HOXA4-204ENST00000610970 FRMPD1Q5SYB0 1578 aa32.2■■■□□ 2.75
HOXA4-204ENST00000610970 IFT172Q9UG01 1749 aa32.2■■■□□ 2.75
HOXA4-204ENST00000610970 INSRP06213 1382 aa32.16■■■□□ 2.74
HOXA4-204ENST00000610970 CNGB1Q14028 1251 aaPredicted RBP32.15■■■□□ 2.74
HOXA4-204ENST00000610970 ABCA6Q8N139 1617 aa32.15■■■□□ 2.74
HOXA4-204ENST00000610970 NRXN1Q9ULB1 1477 aa32.13■■■□□ 2.73
HOXA4-204ENST00000610970 PANK3Q9H999 370 aa32.13■■■□□ 2.73
HOXA4-204ENST00000610970 ZMYM4Q5VZL5 1548 aa32.13■■■□□ 2.73
HOXA4-204ENST00000610970 ADGRB3O60242 1522 aa32.12■■■□□ 2.73
HOXA4-204ENST00000610970 TSHZ2Q9NRE2 1034 aa32.12■■■□□ 2.73
HOXA4-204ENST00000610970 SYNMO15061 1565 aa32.11■■■□□ 2.73
HOXA4-204ENST00000610970 UGGT1Q9NYU2 1555 aa32.1■■■□□ 2.73
HOXA4-204ENST00000610970 NUDCQ9Y266 331 aa32.09■■■□□ 2.73
HOXA4-204ENST00000610970 MROH2AA6NES4 1674 aa32.08■■■□□ 2.73
HOXA4-204ENST00000610970 ABCC3O15438 1527 aa32.07■■■□□ 2.72
HOXA4-204ENST00000610970 NPATQ14207 1427 aa32.06■■■□□ 2.72
HOXA4-204ENST00000610970 PPP4R2Q9NY27 417 aa32.04■■■□□ 2.72
HOXA4-204ENST00000610970 SETBP1Q9Y6X0 1596 aa32.04■■■□□ 2.72
HOXA4-204ENST00000610970 RICTORQ6R327 1708 aa32.04■■■□□ 2.72
HOXA4-204ENST00000610970 DIP2CQ9Y2E4 1556 aa32.04■■■□□ 2.72
HOXA4-204ENST00000610970 RPGRIP1LQ68CZ1 1315 aa32.03■■■□□ 2.72
HOXA4-204ENST00000610970 CAMSAP1Q5T5Y3 1602 aa32.02■■■□□ 2.72
HOXA4-204ENST00000610970 KDM5AP29375 1690 aaKnown RBP32.01■■■□□ 2.71
HOXA4-204ENST00000610970 MYO3AQ8NEV4 1616 aa32.01■■■□□ 2.71
HOXA4-204ENST00000610970 ZC3H13Q5T200 1668 aaKnown RBP32■■■□□ 2.71
HOXA4-204ENST00000610970 ADGRF5Q8IZF2 1346 aa32■■■□□ 2.71
HOXA4-204ENST00000610970 GGT6Q6P531 493 aa31.99■■■□□ 2.71
HOXA4-204ENST00000610970 PPLO60437 1756 aa31.99■■■□□ 2.71
HOXA4-204ENST00000610970 NPC1L1Q9UHC9 1359 aa31.99■■■□□ 2.71
HOXA4-204ENST00000610970 RNF123Q5XPI4 1314 aa31.98■■■□□ 2.71
HOXA4-204ENST00000610970 KNSTRNQ9Y448 316 aa31.97■■■□□ 2.71
HOXA4-204ENST00000610970 SBNO2Q9Y2G9 1366 aa31.97■■■□□ 2.71
HOXA4-204ENST00000610970 NOS1P29475 1434 aa31.97■■■□□ 2.71
HOXA4-204ENST00000610970 ARHGAP31Q2M1Z3 1444 aa31.97■■■□□ 2.71
HOXA4-204ENST00000610970 CFAP70Q5T0N1 1121 aa31.97■■■□□ 2.71
HOXA4-204ENST00000610970 CC2D1BQ5T0F9 858 aaKnown RBP31.96■■■□□ 2.71
HOXA4-204ENST00000610970 MYOM1P52179 1685 aa31.95■■■□□ 2.7
HOXA4-204ENST00000610970 RAPGEF3O95398 923 aa31.95■■■□□ 2.7
HOXA4-204ENST00000610970 PDE3BQ13370 1112 aa31.95■■■□□ 2.7
HOXA4-204ENST00000610970 IRX6P78412 446 aaPredicted RBP31.93■■■□□ 2.7
HOXA4-204ENST00000610970 PIK3C2BO00750 1634 aa31.93■■■□□ 2.7
HOXA4-204ENST00000610970 ASXL1Q8IXJ9 1541 aa31.92■■■□□ 2.7
HOXA4-204ENST00000610970 PIK3C2GO75747 1445 aa31.9■■■□□ 2.7
HOXA4-204ENST00000610970 BLMP54132 1417 aaPredicted RBP31.9■■■□□ 2.7
HOXA4-204ENST00000610970 ERVK-7P63135 1459 aa31.88■■■□□ 2.69
HOXA4-204ENST00000610970 AMER1Q5JTC6 1135 aaPredicted RBP31.88■■■□□ 2.69
HOXA4-204ENST00000610970 C14orf93Q9H972 538 aaKnown RBP31.87■■■□□ 2.69
HOXA4-204ENST00000610970 CHGAP10645 457 aaKnown RBP31.84■■■□□ 2.69
HOXA4-204ENST00000610970 SIGLEC1Q9BZZ2 1709 aa31.84■■■□□ 2.69
HOXA4-204ENST00000610970 CFAP65Q6ZU64 1925 aaKnown RBP31.83■■■□□ 2.69
HOXA4-204ENST00000610970 ADGRB1O14514 1584 aa31.8■■■□□ 2.68
HOXA4-204ENST00000610970 CENPJQ9HC77 1338 aaPredicted RBP31.8■■■□□ 2.68
HOXA4-204ENST00000610970 PPP2R1AP30153 589 aa31.79■■■□□ 2.68
HOXA4-204ENST00000610970 VGFO15240 615 aaPredicted RBP31.78■■■□□ 2.68
HOXA4-204ENST00000610970 SLC52A1Q9NWF4 448 aa31.78■■■□□ 2.68
HOXA4-204ENST00000610970 YEATS2Q9ULM3 1422 aa31.76■■■□□ 2.68
HOXA4-204ENST00000610970 ZFYVE9O95405 1425 aa31.76■■■□□ 2.67
HOXA4-204ENST00000610970 NEXMIFQ5QGS0 1516 aa31.74■■■□□ 2.67
HOXA4-204ENST00000610970 REREQ9P2R6 1566 aa31.74■■■□□ 2.67
HOXA4-204ENST00000610970 PUS7Q96PZ0 661 aaKnown RBP31.72■■■□□ 2.67
HOXA4-204ENST00000610970 QRICH2Q9H0J4 1663 aa31.72■■■□□ 2.67
HOXA4-204ENST00000610970 PPP6R1Q9UPN7 881 aa31.69■■■□□ 2.66
HOXA4-204ENST00000610970 PREX1Q8TCU6 1659 aa31.69■■■□□ 2.66
HOXA4-204ENST00000610970 WDR43Q15061 677 aaKnown RBP eCLIP31.67■■■□□ 2.66
HOXA4-204ENST00000610970 AGLP35573 1532 aa31.66■■■□□ 2.66
HOXA4-204ENST00000610970 RCAN3Q9UKA8 241 aa31.63■■■□□ 2.65
HOXA4-204ENST00000610970 TRAK1Q9UPV9 953 aa31.63■■■□□ 2.65
HOXA4-204ENST00000610970 RBM19Q9Y4C8 960 aaKnown RBP31.63■■■□□ 2.65
HOXA4-204ENST00000610970 IDI1Q13907 227 aa31.63■■■□□ 2.65
HOXA4-204ENST00000610970 ADAMTS8Q9UP79 889 aa31.63■■■□□ 2.65
HOXA4-204ENST00000610970 TMEM131LA2VDJ0 1609 aa31.61■■■□□ 2.65
HOXA4-204ENST00000610970 B4GALNT3Q6L9W6 998 aa31.61■■■□□ 2.65
HOXA4-204ENST00000610970 ARHGEF28Q8N1W1 1705 aaKnown RBP31.6■■■□□ 2.65
HOXA4-204ENST00000610970 RRP1P56182 461 aaKnown RBP31.6■■■□□ 2.65
HOXA4-204ENST00000610970 CARD14Q9BXL6 1004 aa31.59■■■□□ 2.65
HOXA4-204ENST00000610970 USP32Q8NFA0 1604 aa31.59■■■□□ 2.65
HOXA4-204ENST00000610970 SENP3-EIF4A1A0A087X0R7 540 aa31.57■■■□□ 2.64
HOXA4-204ENST00000610970 TMEM132EQ6IEE7 984 aa31.55■■■□□ 2.64
HOXA4-204ENST00000610970 SALL2Q9Y467 1007 aaPredicted RBP31.55■■■□□ 2.64
HOXA4-204ENST00000610970 EVC2Q86UK5 1308 aa31.54■■■□□ 2.64
HOXA4-204ENST00000610970 ARHGEF40Q8TER5 1519 aa31.54■■■□□ 2.64
HOXA4-204ENST00000610970 NGEFQ8N5V2 710 aa31.54■■■□□ 2.64
HOXA4-204ENST00000610970 MYO5BQ9ULV0 1848 aa31.51■■■□□ 2.63
HOXA4-204ENST00000610970 CCDC136Q96JN2 1154 aa31.51■■■□□ 2.63
HOXA4-204ENST00000610970 POLR3AO14802 1390 aaPredicted RBP31.5■■■□□ 2.63
HOXA4-204ENST00000610970 CDCA7LQ96GN5 454 aa31.49■■■□□ 2.63
HOXA4-204ENST00000610970 NSD3Q9BZ95 1437 aa31.48■■■□□ 2.63
HOXA4-204ENST00000610970 NINLQ9Y2I6 1382 aa31.47■■■□□ 2.63
HOXA4-204ENST00000610970 ZNF521Q96K83 1311 aa31.47■■■□□ 2.63
HOXA4-204ENST00000610970 TULP4Q9NRJ4 1543 aa31.45■■■□□ 2.63
HOXA4-204ENST00000610970 NSD2O96028 1365 aa31.44■■■□□ 2.62
HOXA4-204ENST00000610970 SLC12A5Q9H2X9 1139 aa31.43■■■□□ 2.62
HOXA4-204ENST00000610970 ANKRD36BQ8N2N9 1353 aa31.42■■■□□ 2.62
HOXA4-204ENST00000610970 MYT1Q01538 1121 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 PLEKHH1Q9ULM0 1364 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms