RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 CLTCQ00610 1675 aaKnown RBP25.23■■□□□ 1.63
SNAPC3-207ENST00000610884 DISP3Q9P2K9 1392 aa25.21■■□□□ 1.63
SNAPC3-207ENST00000610884 ARHGEF40Q8TER5 1519 aa25.2■■□□□ 1.63
SNAPC3-207ENST00000610884 GPRASP1Q5JY77 1395 aa25.2■■□□□ 1.62
SNAPC3-207ENST00000610884 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
SNAPC3-207ENST00000610884 ADGRB3O60242 1522 aa25.17■■□□□ 1.62
SNAPC3-207ENST00000610884 ARHGAP31Q2M1Z3 1444 aa25.17■■□□□ 1.62
SNAPC3-207ENST00000610884 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
SNAPC3-207ENST00000610884 SLC52A1Q9NWF4 448 aa25.15■■□□□ 1.62
SNAPC3-207ENST00000610884 MYO5BQ9ULV0 1848 aa25.14■■□□□ 1.62
SNAPC3-207ENST00000610884 AGLP35573 1532 aa25.14■■□□□ 1.62
SNAPC3-207ENST00000610884 PREX1Q8TCU6 1659 aa25.14■■□□□ 1.61
SNAPC3-207ENST00000610884 SAFB2Q14151 953 aaKnown RBP eCLIP25.14■■□□□ 1.61
SNAPC3-207ENST00000610884 STK26Q9P289 416 aa25.13■■□□□ 1.61
SNAPC3-207ENST00000610884 PRKRIP1Q9H875 184 aaPredicted RBP25.12■■□□□ 1.61
SNAPC3-207ENST00000610884 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
SNAPC3-207ENST00000610884 ZC3H13Q5T200 1668 aaKnown RBP25.11■■□□□ 1.61
SNAPC3-207ENST00000610884 SENP3-EIF4A1A0A087X0R7 540 aa25.1■■□□□ 1.61
SNAPC3-207ENST00000610884 REREQ9P2R6 1566 aa25.09■■□□□ 1.61
SNAPC3-207ENST00000610884 PIK3C2BO00750 1634 aa25.08■■□□□ 1.61
SNAPC3-207ENST00000610884 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
SNAPC3-207ENST00000610884 C14orf93Q9H972 538 aaKnown RBP25.08■■□□□ 1.61
SNAPC3-207ENST00000610884 TMF1P82094 1093 aa25.07■■□□□ 1.6
SNAPC3-207ENST00000610884 IFT172Q9UG01 1749 aa25.07■■□□□ 1.6
SNAPC3-207ENST00000610884 MYOM2P54296 1465 aa25.06■■□□□ 1.6
SNAPC3-207ENST00000610884 STAC3Q96MF2 364 aa25.06■■□□□ 1.6
SNAPC3-207ENST00000610884 PPLO60437 1756 aa25.06■■□□□ 1.6
SNAPC3-207ENST00000610884 SCAF11Q99590 1463 aaKnown RBP25.05■■□□□ 1.6
SNAPC3-207ENST00000610884 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
SNAPC3-207ENST00000610884 POLR1AO95602 1720 aaPredicted RBP25.05■■□□□ 1.6
SNAPC3-207ENST00000610884 PPP6R1Q9UPN7 881 aa25.05■■□□□ 1.6
SNAPC3-207ENST00000610884 PANK3Q9H999 370 aa25.04■■□□□ 1.6
SNAPC3-207ENST00000610884 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
SNAPC3-207ENST00000610884 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
SNAPC3-207ENST00000610884 TMEM131LA2VDJ0 1609 aa25.02■■□□□ 1.6
SNAPC3-207ENST00000610884 CCER2I3L3R5 266 aa25.01■■□□□ 1.59
SNAPC3-207ENST00000610884 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.59
SNAPC3-207ENST00000610884 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
SNAPC3-207ENST00000610884 NRXN1Q9ULB1 1477 aa25■■□□□ 1.59
SNAPC3-207ENST00000610884 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
SNAPC3-207ENST00000610884 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
SNAPC3-207ENST00000610884 NEURL4Q96JN8 1562 aa24.98■■□□□ 1.59
SNAPC3-207ENST00000610884 MYT1Q01538 1121 aa24.97■■□□□ 1.59
SNAPC3-207ENST00000610884 BCANQ96GW7 911 aa24.97■■□□□ 1.59
SNAPC3-207ENST00000610884 LAMC1P11047 1609 aa24.97■■□□□ 1.59
SNAPC3-207ENST00000610884 A2ML1A8K2U0 1454 aa24.94■■□□□ 1.58
SNAPC3-207ENST00000610884 PER1O15534 1290 aaPredicted RBP24.94■■□□□ 1.58
SNAPC3-207ENST00000610884 CENPJQ9HC77 1338 aaPredicted RBP24.93■■□□□ 1.58
SNAPC3-207ENST00000610884 SPATA31D1Q6ZQQ2 1576 aa24.93■■□□□ 1.58
SNAPC3-207ENST00000610884 TNRQ92752 1358 aa24.93■■□□□ 1.58
SNAPC3-207ENST00000610884 ADGRB1O14514 1584 aa24.91■■□□□ 1.58
SNAPC3-207ENST00000610884 EIF3AQ14152 1382 aaKnown RBP24.91■■□□□ 1.58
SNAPC3-207ENST00000610884 TMC1Q8TDI8 760 aa24.89■■□□□ 1.58
SNAPC3-207ENST00000610884 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
SNAPC3-207ENST00000610884 KIAA1210Q9ULL0 1709 aa24.88■■□□□ 1.57
SNAPC3-207ENST00000610884 WAPLQ7Z5K2 1190 aa24.88■■□□□ 1.57
SNAPC3-207ENST00000610884 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
SNAPC3-207ENST00000610884 PRAM1Q96QH2 718 aa24.87■■□□□ 1.57
SNAPC3-207ENST00000610884 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
SNAPC3-207ENST00000610884 HNRNPUQ00839 825 aaKnown RBP eCLIP24.86■■□□□ 1.57
SNAPC3-207ENST00000610884 SLC12A5Q9H2X9 1139 aa24.86■■□□□ 1.57
SNAPC3-207ENST00000610884 LTKP29376 864 aa24.86■■□□□ 1.57
SNAPC3-207ENST00000610884 CABP2Q9NPB3 220 aa24.86■■□□□ 1.57
SNAPC3-207ENST00000610884 ASXL1Q8IXJ9 1541 aa24.83■■□□□ 1.56
SNAPC3-207ENST00000610884 SLC26A8Q96RN1 970 aa24.82■■□□□ 1.56
SNAPC3-207ENST00000610884 POGKQ9P215 609 aa24.82■■□□□ 1.56
SNAPC3-207ENST00000610884 CARD14Q9BXL6 1004 aa24.8■■□□□ 1.56
SNAPC3-207ENST00000610884 TXNDC2Q86VQ3 553 aa24.79■■□□□ 1.56
SNAPC3-207ENST00000610884 METP08581 1390 aa24.79■■□□□ 1.56
SNAPC3-207ENST00000610884 ALKQ9UM73 1620 aa24.79■■□□□ 1.56
SNAPC3-207ENST00000610884 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
SNAPC3-207ENST00000610884 KNSTRNQ9Y448 316 aa24.78■■□□□ 1.56
SNAPC3-207ENST00000610884 SETBP1Q9Y6X0 1596 aa24.78■■□□□ 1.56
SNAPC3-207ENST00000610884 CDCA8Q53HL2 280 aa24.78■■□□□ 1.56
SNAPC3-207ENST00000610884 C3P01024 1663 aa24.77■■□□□ 1.56
SNAPC3-207ENST00000610884 PTPRMP28827 1452 aa24.77■■□□□ 1.56
SNAPC3-207ENST00000610884 PLEKHH1Q9ULM0 1364 aa24.76■■□□□ 1.55
SNAPC3-207ENST00000610884 FER1L4A9Z1Z3 1794 aa24.76■■□□□ 1.55
SNAPC3-207ENST00000610884 YTHDC2Q9H6S0 1430 aaKnown RBP24.76■■□□□ 1.55
SNAPC3-207ENST00000610884 SRPK2P78362 688 aaKnown RBP24.76■■□□□ 1.55
SNAPC3-207ENST00000610884 KTN1Q86UP2 1357 aaKnown RBP24.74■■□□□ 1.55
SNAPC3-207ENST00000610884 TMEM2Q9UHN6 1383 aa24.74■■□□□ 1.55
SNAPC3-207ENST00000610884 QRICH2Q9H0J4 1663 aa24.74■■□□□ 1.55
SNAPC3-207ENST00000610884 TNNT2P45379 298 aaPredicted RBP24.73■■□□□ 1.55
SNAPC3-207ENST00000610884 AMER1Q5JTC6 1135 aaPredicted RBP24.72■■□□□ 1.55
SNAPC3-207ENST00000610884 ARHGEF28Q8N1W1 1705 aaKnown RBP24.7■■□□□ 1.55
SNAPC3-207ENST00000610884 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.54
SNAPC3-207ENST00000610884 SALL2Q9Y467 1007 aaPredicted RBP24.7■■□□□ 1.54
SNAPC3-207ENST00000610884 UBR1Q8IWV7 1749 aa24.69■■□□□ 1.54
SNAPC3-207ENST00000610884 MYOM1P52179 1685 aa24.69■■□□□ 1.54
SNAPC3-207ENST00000610884 RALBP1Q15311 655 aa24.69■■□□□ 1.54
SNAPC3-207ENST00000610884 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNAPC3-207ENST00000610884 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
SNAPC3-207ENST00000610884 KDM5AP29375 1690 aaKnown RBP24.68■■□□□ 1.54
SNAPC3-207ENST00000610884 NCKAP5LQ9HCH0 1330 aa24.68■■□□□ 1.54
SNAPC3-207ENST00000610884 NUTM2FA1L443 756 aa24.68■■□□□ 1.54
SNAPC3-207ENST00000610884 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
SNAPC3-207ENST00000610884 PARD3Q8TEW0 1356 aa24.67■■□□□ 1.54
SNAPC3-207ENST00000610884 RIMS1Q86UR5 1692 aaKnown RBP24.67■■□□□ 1.54
SNAPC3-207ENST00000610884 CDK19Q9BWU1 502 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms