RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
NOLC1-208ENST00000603946 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
NOLC1-208ENST00000603946 C3P01024 1663 aa11.51□□□□□ -0.57
NOLC1-208ENST00000603946 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
NOLC1-208ENST00000603946 SPATA31E1Q6ZUB1 1445 aa11.5□□□□□ -0.57
NOLC1-208ENST00000603946 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
NOLC1-208ENST00000603946 REREQ9P2R6 1566 aa11.49□□□□□ -0.57
NOLC1-208ENST00000603946 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
NOLC1-208ENST00000603946 PREX1Q8TCU6 1659 aa11.49□□□□□ -0.57
NOLC1-208ENST00000603946 C11orf95C9JLR9 678 aaPredicted RBP11.49□□□□□ -0.57
NOLC1-208ENST00000603946 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
NOLC1-208ENST00000603946 ARHGAP31Q2M1Z3 1444 aa11.49□□□□□ -0.57
NOLC1-208ENST00000603946 LMTK2Q8IWU2 1503 aa11.48□□□□□ -0.57
NOLC1-208ENST00000603946 MYO5BQ9ULV0 1848 aa11.48□□□□□ -0.57
NOLC1-208ENST00000603946 RIMS2Q9UQ26 1411 aa11.48□□□□□ -0.57
NOLC1-208ENST00000603946 TRPM2O94759 1503 aa11.48□□□□□ -0.57
NOLC1-208ENST00000603946 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
NOLC1-208ENST00000603946 PIK3C2BO00750 1634 aa11.47□□□□□ -0.57
NOLC1-208ENST00000603946 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
NOLC1-208ENST00000603946 MINK1Q8N4C8 1332 aaPredicted RBP11.47□□□□□ -0.57
NOLC1-208ENST00000603946 ADAMTSL3P82987 1691 aa11.47□□□□□ -0.57
NOLC1-208ENST00000603946 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
NOLC1-208ENST00000603946 TMEM2Q9UHN6 1383 aa11.46□□□□□ -0.57
NOLC1-208ENST00000603946 MROH2AA6NES4 1674 aa11.46□□□□□ -0.57
NOLC1-208ENST00000603946 UHRF1BP1Q6BDS2 1440 aa11.46□□□□□ -0.58
NOLC1-208ENST00000603946 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
NOLC1-208ENST00000603946 METP08581 1390 aa11.45□□□□□ -0.58
NOLC1-208ENST00000603946 POGKQ9P215 609 aa11.45□□□□□ -0.58
NOLC1-208ENST00000603946 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
NOLC1-208ENST00000603946 PRAM1Q96QH2 718 aa11.45□□□□□ -0.58
NOLC1-208ENST00000603946 KCNA6P17658 529 aa11.43□□□□□ -0.58
NOLC1-208ENST00000603946 AMOTL2Q9Y2J4 779 aa11.43□□□□□ -0.58
NOLC1-208ENST00000603946 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
NOLC1-208ENST00000603946 SPATA31D1Q6ZQQ2 1576 aa11.43□□□□□ -0.58
NOLC1-208ENST00000603946 PRAG1Q86YV5 1406 aa11.42□□□□□ -0.58
NOLC1-208ENST00000603946 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
NOLC1-208ENST00000603946 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
NOLC1-208ENST00000603946 KIF1BO60333 1816 aa11.41□□□□□ -0.58
NOLC1-208ENST00000603946 TIMELESSQ9UNS1 1208 aa11.41□□□□□ -0.58
NOLC1-208ENST00000603946 ZNF335Q9H4Z2 1342 aaPredicted RBP11.41□□□□□ -0.58
NOLC1-208ENST00000603946 TMC1Q8TDI8 760 aa11.41□□□□□ -0.58
NOLC1-208ENST00000603946 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
NOLC1-208ENST00000603946 USP47Q96K76 1375 aa11.4□□□□□ -0.58
NOLC1-208ENST00000603946 PLEKHH1Q9ULM0 1364 aa11.4□□□□□ -0.58
NOLC1-208ENST00000603946 TMEM131LA2VDJ0 1609 aa11.4□□□□□ -0.58
NOLC1-208ENST00000603946 ZC3H13Q5T200 1668 aaKnown RBP11.4□□□□□ -0.58
NOLC1-208ENST00000603946 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
NOLC1-208ENST00000603946 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.4□□□□□ -0.58
NOLC1-208ENST00000603946 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
NOLC1-208ENST00000603946 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
NOLC1-208ENST00000603946 CEP170BQ9Y4F5 1589 aaPredicted RBP11.37□□□□□ -0.59
NOLC1-208ENST00000603946 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
NOLC1-208ENST00000603946 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
NOLC1-208ENST00000603946 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
NOLC1-208ENST00000603946 NLRP1Q9C000 1473 aa11.37□□□□□ -0.59
NOLC1-208ENST00000603946 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
NOLC1-208ENST00000603946 KCNA4P22459 653 aa11.36□□□□□ -0.59
NOLC1-208ENST00000603946 ZFYVE9O95405 1425 aa11.36□□□□□ -0.59
NOLC1-208ENST00000603946 MYO3AQ8NEV4 1616 aa11.36□□□□□ -0.59
NOLC1-208ENST00000603946 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
NOLC1-208ENST00000603946 LMTK3Q96Q04 1460 aa11.35□□□□□ -0.59
NOLC1-208ENST00000603946 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
NOLC1-208ENST00000603946 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
NOLC1-208ENST00000603946 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
NOLC1-208ENST00000603946 PMFBP1Q8TBY8 1022 aa11.35□□□□□ -0.59
NOLC1-208ENST00000603946 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
NOLC1-208ENST00000603946 PIK3C2GO75747 1445 aa11.34□□□□□ -0.59
NOLC1-208ENST00000603946 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
NOLC1-208ENST00000603946 SLC12A5Q9H2X9 1139 aa11.34□□□□□ -0.59
NOLC1-208ENST00000603946 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
NOLC1-208ENST00000603946 ROBO2Q9HCK4 1378 aa11.33□□□□□ -0.6
NOLC1-208ENST00000603946 TESK2Q96S53 571 aa11.33□□□□□ -0.6
NOLC1-208ENST00000603946 ADAMTS13Q76LX8 1427 aa11.33□□□□□ -0.6
NOLC1-208ENST00000603946 PTPRUQ92729 1446 aa11.33□□□□□ -0.6
NOLC1-208ENST00000603946 SOX12O15370 315 aa11.32□□□□□ -0.6
NOLC1-208ENST00000603946 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
NOLC1-208ENST00000603946 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
NOLC1-208ENST00000603946 TBX22Q9Y458 520 aa11.32□□□□□ -0.6
NOLC1-208ENST00000603946 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
NOLC1-208ENST00000603946 NPHP4O75161 1426 aaPredicted RBP11.32□□□□□ -0.6
NOLC1-208ENST00000603946 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
NOLC1-208ENST00000603946 CDK19Q9BWU1 502 aa11.31□□□□□ -0.6
NOLC1-208ENST00000603946 YTHDC2Q9H6S0 1430 aaKnown RBP11.31□□□□□ -0.6
NOLC1-208ENST00000603946 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
NOLC1-208ENST00000603946 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
NOLC1-208ENST00000603946 FBLN1P23142 703 aa11.3□□□□□ -0.6
NOLC1-208ENST00000603946 PLEKHG1Q9ULL1 1385 aa11.3□□□□□ -0.6
NOLC1-208ENST00000603946 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
NOLC1-208ENST00000603946 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
NOLC1-208ENST00000603946 PPLO60437 1756 aa11.29□□□□□ -0.6
NOLC1-208ENST00000603946 CABP1Q9NZU7 370 aa11.29□□□□□ -0.6
NOLC1-208ENST00000603946 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
NOLC1-208ENST00000603946 TMF1P82094 1093 aa11.28□□□□□ -0.6
NOLC1-208ENST00000603946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
NOLC1-208ENST00000603946 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
NOLC1-208ENST00000603946 RALGAPBQ86X10 1494 aa11.27□□□□□ -0.6
NOLC1-208ENST00000603946 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
NOLC1-208ENST00000603946 PANK3Q9H999 370 aa11.27□□□□□ -0.61
NOLC1-208ENST00000603946 FOXO3O43524 673 aa11.26□□□□□ -0.61
NOLC1-208ENST00000603946 ASXL1Q8IXJ9 1541 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms