RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
RNF40-212ENST00000602784 NEURL4Q96JN8 1562 aa20.35■□□□□ 0.85
RNF40-212ENST00000602784 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
RNF40-212ENST00000602784 NPHP4O75161 1426 aaPredicted RBP20.33■□□□□ 0.84
RNF40-212ENST00000602784 RPGRIP1LQ68CZ1 1315 aa20.32■□□□□ 0.84
RNF40-212ENST00000602784 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
RNF40-212ENST00000602784 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
RNF40-212ENST00000602784 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
RNF40-212ENST00000602784 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
RNF40-212ENST00000602784 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
RNF40-212ENST00000602784 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
RNF40-212ENST00000602784 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.83
RNF40-212ENST00000602784 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
RNF40-212ENST00000602784 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
RNF40-212ENST00000602784 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
RNF40-212ENST00000602784 PPLO60437 1756 aa20.21■□□□□ 0.83
RNF40-212ENST00000602784 BCANQ96GW7 911 aa20.2■□□□□ 0.82
RNF40-212ENST00000602784 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
RNF40-212ENST00000602784 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
RNF40-212ENST00000602784 SETBP1Q9Y6X0 1596 aa20.18■□□□□ 0.82
RNF40-212ENST00000602784 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
RNF40-212ENST00000602784 IFT172Q9UG01 1749 aa20.18■□□□□ 0.82
RNF40-212ENST00000602784 DIP2AQ14689 1571 aa20.17■□□□□ 0.82
RNF40-212ENST00000602784 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
RNF40-212ENST00000602784 ZNF335Q9H4Z2 1342 aaPredicted RBP20.16■□□□□ 0.82
RNF40-212ENST00000602784 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
RNF40-212ENST00000602784 MYOM2P54296 1465 aa20.14■□□□□ 0.81
RNF40-212ENST00000602784 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
RNF40-212ENST00000602784 SIN3AQ96ST3 1273 aa20.14■□□□□ 0.81
RNF40-212ENST00000602784 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
RNF40-212ENST00000602784 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
RNF40-212ENST00000602784 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
RNF40-212ENST00000602784 NRXN1Q9ULB1 1477 aa20.12■□□□□ 0.81
RNF40-212ENST00000602784 KCNA6P17658 529 aa20.11■□□□□ 0.81
RNF40-212ENST00000602784 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
RNF40-212ENST00000602784 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
RNF40-212ENST00000602784 CPS1P31327 1500 aa20.11■□□□□ 0.81
RNF40-212ENST00000602784 PIK3C2GO75747 1445 aa20.1■□□□□ 0.81
RNF40-212ENST00000602784 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
RNF40-212ENST00000602784 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
RNF40-212ENST00000602784 CHD2O14647 1828 aaKnown RBP20.07■□□□□ 0.8
RNF40-212ENST00000602784 CERKQ8TCT0 537 aa20.07■□□□□ 0.8
RNF40-212ENST00000602784 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
RNF40-212ENST00000602784 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
RNF40-212ENST00000602784 L3MBTL2Q969R5 705 aa20.06■□□□□ 0.8
RNF40-212ENST00000602784 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
RNF40-212ENST00000602784 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
RNF40-212ENST00000602784 METP08581 1390 aa20.06■□□□□ 0.8
RNF40-212ENST00000602784 NKTRP30414 1462 aaKnown RBP20.05■□□□□ 0.8
RNF40-212ENST00000602784 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
RNF40-212ENST00000602784 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
RNF40-212ENST00000602784 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
RNF40-212ENST00000602784 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.8
RNF40-212ENST00000602784 LAMC1P11047 1609 aa20.02■□□□□ 0.79
RNF40-212ENST00000602784 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.79
RNF40-212ENST00000602784 PTPRUQ92729 1446 aa20.02■□□□□ 0.79
RNF40-212ENST00000602784 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
RNF40-212ENST00000602784 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
RNF40-212ENST00000602784 PROSER2Q86WR7 435 aaPredicted RBP19.99■□□□□ 0.79
RNF40-212ENST00000602784 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
RNF40-212ENST00000602784 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
RNF40-212ENST00000602784 NCOA3Q9Y6Q9 1424 aa19.97■□□□□ 0.79
RNF40-212ENST00000602784 TIMELESSQ9UNS1 1208 aa19.97■□□□□ 0.79
RNF40-212ENST00000602784 LRPPRCP42704 1394 aaKnown RBP19.96■□□□□ 0.79
RNF40-212ENST00000602784 TMEM94Q12767 1356 aa19.95■□□□□ 0.79
RNF40-212ENST00000602784 ABCC11Q96J66 1382 aa19.95■□□□□ 0.79
RNF40-212ENST00000602784 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
RNF40-212ENST00000602784 ASXL1Q8IXJ9 1541 aa19.95■□□□□ 0.78
RNF40-212ENST00000602784 PTCH1Q13635 1447 aa19.94■□□□□ 0.78
RNF40-212ENST00000602784 TECPR2O15040 1411 aa19.93■□□□□ 0.78
RNF40-212ENST00000602784 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
RNF40-212ENST00000602784 KIAA1210Q9ULL0 1709 aa19.93■□□□□ 0.78
RNF40-212ENST00000602784 ADGRB1O14514 1584 aa19.92■□□□□ 0.78
RNF40-212ENST00000602784 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
RNF40-212ENST00000602784 XIRP1Q702N8 1843 aaKnown RBP19.91■□□□□ 0.78
RNF40-212ENST00000602784 ROBO2Q9HCK4 1378 aa19.9■□□□□ 0.78
RNF40-212ENST00000602784 STK26Q9P289 416 aa19.89■□□□□ 0.77
RNF40-212ENST00000602784 KNDC1Q76NI1 1749 aa19.88■□□□□ 0.77
RNF40-212ENST00000602784 FAM135BQ49AJ0 1406 aa19.88■□□□□ 0.77
RNF40-212ENST00000602784 RBM33Q96EV2 1170 aaKnown RBP19.88■□□□□ 0.77
RNF40-212ENST00000602784 C19orf44Q9H6X5 657 aa19.88■□□□□ 0.77
RNF40-212ENST00000602784 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
RNF40-212ENST00000602784 MSH6P52701 1360 aa19.86■□□□□ 0.77
RNF40-212ENST00000602784 TOM1O60784 492 aa19.86■□□□□ 0.77
RNF40-212ENST00000602784 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
RNF40-212ENST00000602784 NBPF8Q3BBV2 869 aa19.86■□□□□ 0.77
RNF40-212ENST00000602784 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
RNF40-212ENST00000602784 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
RNF40-212ENST00000602784 UBAP1LF5GYI3 381 aa19.84■□□□□ 0.77
RNF40-212ENST00000602784 C14orf37Q86TY3 774 aa19.84■□□□□ 0.77
RNF40-212ENST00000602784 DCCP43146 1447 aa19.83■□□□□ 0.76
RNF40-212ENST00000602784 ADGRL3Q9HAR2 1447 aa19.83■□□□□ 0.76
RNF40-212ENST00000602784 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
RNF40-212ENST00000602784 CADPS2Q86UW7 1296 aa19.81■□□□□ 0.76
RNF40-212ENST00000602784 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
RNF40-212ENST00000602784 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
RNF40-212ENST00000602784 ATF3P18847 181 aa19.8■□□□□ 0.76
RNF40-212ENST00000602784 PRAM1Q96QH2 718 aa19.8■□□□□ 0.76
RNF40-212ENST00000602784 ROCK2O75116 1388 aaKnown RBP19.8■□□□□ 0.76
RNF40-212ENST00000602784 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms