RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
SHANK2-218ENST00000601538 ERLIN2O94905 339 aa14.78□□□□□ -0.04
SHANK2-218ENST00000601538 NLRP13Q86W25 1043 aa14.78□□□□□ -0.04
SHANK2-218ENST00000601538 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
SHANK2-218ENST00000601538 ODF2Q5BJF6 829 aa14.77□□□□□ -0.04
SHANK2-218ENST00000601538 TXLNBQ8N3L3 684 aa14.77□□□□□ -0.05
SHANK2-218ENST00000601538 ANKRD18AQ8IVF6 992 aa14.77□□□□□ -0.05
SHANK2-218ENST00000601538 CUX1P39880 1505 aa14.76□□□□□ -0.05
SHANK2-218ENST00000601538 RRP1P56182 461 aaKnown RBP14.76□□□□□ -0.05
SHANK2-218ENST00000601538 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
SHANK2-218ENST00000601538 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
SHANK2-218ENST00000601538 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
SHANK2-218ENST00000601538 RABEP1Q15276 862 aa14.75□□□□□ -0.05
SHANK2-218ENST00000601538 CT47A1Q5JQC4 288 aaPredicted RBP14.75□□□□□ -0.05
SHANK2-218ENST00000601538 TCEAL9Q9UHQ7 104 aa14.75□□□□□ -0.05
SHANK2-218ENST00000601538 KIF2AO00139 706 aaPredicted RBP14.75□□□□□ -0.05
SHANK2-218ENST00000601538 GTPBP4Q9BZE4 634 aaKnown RBP14.75□□□□□ -0.05
SHANK2-218ENST00000601538 DCAF11Q8TEB1 546 aa14.75□□□□□ -0.05
SHANK2-218ENST00000601538 CIZ1Q9ULV3 898 aaPredicted RBP14.75□□□□□ -0.05
SHANK2-218ENST00000601538 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
SHANK2-218ENST00000601538 PDIA4P13667 645 aaKnown RBP14.75□□□□□ -0.05
SHANK2-218ENST00000601538 ZSCAN30Q86W11 494 aa14.75□□□□□ -0.05
SHANK2-218ENST00000601538 RAB3GAP2Q9H2M9 1393 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 KIF20AO95235 890 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 VPS53Q5VIR6 699 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 OLFM4Q6UX06 510 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 U2AF1L5P0DN76 240 aaPredicted RBP14.74□□□□□ -0.05
SHANK2-218ENST00000601538 U2AF1Q01081 240 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHANK2-218ENST00000601538 MCTP1Q6DN14 999 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 IQCEQ6IPM2 695 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 BICD2Q8TD16 824 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 NAP1L1P55209 391 aaKnown RBP14.74□□□□□ -0.05
SHANK2-218ENST00000601538 CCDC73Q6ZRK6 1079 aa14.74□□□□□ -0.05
SHANK2-218ENST00000601538 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
SHANK2-218ENST00000601538 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
SHANK2-218ENST00000601538 SMARCE1Q969G3 411 aa14.73□□□□□ -0.05
SHANK2-218ENST00000601538 ERLIN1O75477 346 aa14.73□□□□□ -0.05
SHANK2-218ENST00000601538 R3HCC1Q9Y3T6 440 aaKnown RBP14.72□□□□□ -0.05
SHANK2-218ENST00000601538 NOL8Q76FK4 1167 aaKnown RBP14.72□□□□□ -0.05
SHANK2-218ENST00000601538 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
SHANK2-218ENST00000601538 LMOD2Q6P5Q4 547 aa14.72□□□□□ -0.05
SHANK2-218ENST00000601538 DHX57Q6P158 1386 aaKnown RBP14.72□□□□□ -0.05
SHANK2-218ENST00000601538 LUC7LQ9NQ29 371 aaKnown RBP14.71□□□□□ -0.05
SHANK2-218ENST00000601538 BRPF3Q9ULD4 1205 aa14.71□□□□□ -0.05
SHANK2-218ENST00000601538 EPS15P42566 896 aa14.71□□□□□ -0.05
SHANK2-218ENST00000601538 EZRP15311 586 aaKnown RBP14.71□□□□□ -0.06
SHANK2-218ENST00000601538 TERF1P54274 439 aa14.7□□□□□ -0.06
SHANK2-218ENST00000601538 HS1BP3Q53T59 392 aa14.7□□□□□ -0.06
SHANK2-218ENST00000601538 AMOTL1Q8IY63 956 aa14.7□□□□□ -0.06
SHANK2-218ENST00000601538 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
SHANK2-218ENST00000601538 MYBBP1AQ9BQG0 1328 aaKnown RBP14.7□□□□□ -0.06
SHANK2-218ENST00000601538 FOXD4L5Q5VV16 416 aaPredicted RBP14.7□□□□□ -0.06
SHANK2-218ENST00000601538 FOXD4L4Q8WXT5 416 aaPredicted RBP14.7□□□□□ -0.06
SHANK2-218ENST00000601538 HSP90AB2PQ58FF8 381 aa14.69□□□□□ -0.06
SHANK2-218ENST00000601538 PLCD4Q9BRC7 762 aa14.69□□□□□ -0.06
SHANK2-218ENST00000601538 CLCN1P35523 988 aa14.69□□□□□ -0.06
SHANK2-218ENST00000601538 SMG6Q86US8 1419 aaKnown RBP14.69□□□□□ -0.06
SHANK2-218ENST00000601538 DDX11Q96FC9 970 aa14.69□□□□□ -0.06
SHANK2-218ENST00000601538 GIMAP7Q8NHV1 300 aa14.69□□□□□ -0.06
SHANK2-218ENST00000601538 PIP4K2AP48426 406 aaPredicted RBP14.68□□□□□ -0.06
SHANK2-218ENST00000601538 CPLX1O14810 134 aa14.68□□□□□ -0.06
SHANK2-218ENST00000601538 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
SHANK2-218ENST00000601538 IRX3P78415 501 aaPredicted RBP14.68□□□□□ -0.06
SHANK2-218ENST00000601538 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
SHANK2-218ENST00000601538 SAFBQ15424 915 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHANK2-218ENST00000601538 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
SHANK2-218ENST00000601538 SSR1P43307 286 aaKnown RBP14.67□□□□□ -0.06
SHANK2-218ENST00000601538 OFD1O75665 1012 aa14.66□□□□□ -0.06
SHANK2-218ENST00000601538 PRIMPOLQ96LW4 560 aa14.66□□□□□ -0.06
SHANK2-218ENST00000601538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHANK2-218ENST00000601538 TOMM22Q9NS69 142 aa14.66□□□□□ -0.06
SHANK2-218ENST00000601538 E9PSI1 815 aa14.66□□□□□ -0.06
SHANK2-218ENST00000601538 SEPT7Q16181 437 aaKnown RBP14.66□□□□□ -0.06
SHANK2-218ENST00000601538 TERF2IPQ9NYB0 399 aa14.66□□□□□ -0.06
SHANK2-218ENST00000601538 INTS3Q68E01 1043 aaKnown RBP14.65□□□□□ -0.06
SHANK2-218ENST00000601538 SMAP1Q8IYB5 467 aaPredicted RBP14.65□□□□□ -0.06
SHANK2-218ENST00000601538 PDCP20941 246 aa14.65□□□□□ -0.06
SHANK2-218ENST00000601538 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
SHANK2-218ENST00000601538 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
SHANK2-218ENST00000601538 RILPL2Q969X0 211 aa14.65□□□□□ -0.06
SHANK2-218ENST00000601538 WWC1Q8IX03 1113 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
SHANK2-218ENST00000601538 TRDNQ13061 729 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 MEX3CQ5U5Q3 659 aaKnown RBP14.64□□□□□ -0.07
SHANK2-218ENST00000601538 MCM2P49736 904 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 CLASRPQ8N2M8 674 aaKnown RBP14.64□□□□□ -0.07
SHANK2-218ENST00000601538 UQCRHLA0A096LP55 91 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 UQCRHP07919 91 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 TIGD1Q96MW7 591 aa14.64□□□□□ -0.07
SHANK2-218ENST00000601538 BRMS1Q9HCU9 246 aa14.63□□□□□ -0.07
SHANK2-218ENST00000601538 ZKSCAN2Q63HK3 967 aa14.63□□□□□ -0.07
SHANK2-218ENST00000601538 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
SHANK2-218ENST00000601538 FILIP1LQ4L180 1135 aa14.63□□□□□ -0.07
SHANK2-218ENST00000601538 GRPEL1Q9HAV7 217 aa14.63□□□□□ -0.07
SHANK2-218ENST00000601538 TRIM5Q9C035 493 aa14.63□□□□□ -0.07
SHANK2-218ENST00000601538 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
SHANK2-218ENST00000601538 BRD4O60885 1362 aaPredicted RBP14.62□□□□□ -0.07
SHANK2-218ENST00000601538 TSPY26PQ9H489 355 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms