RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 HDGFP51858 240 aaKnown RBP21.5■■□□□ 1.03
LTBP4-228ENST00000600499 SPATA31E1Q6ZUB1 1445 aa21.49■■□□□ 1.03
LTBP4-228ENST00000600499 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
LTBP4-228ENST00000600499 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
LTBP4-228ENST00000600499 RPGRIP1LQ68CZ1 1315 aa21.47■■□□□ 1.03
LTBP4-228ENST00000600499 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
LTBP4-228ENST00000600499 DHX57Q6P158 1386 aaKnown RBP21.46■■□□□ 1.03
LTBP4-228ENST00000600499 NEXMIFQ5QGS0 1516 aa21.45■■□□□ 1.02
LTBP4-228ENST00000600499 PLEKHG1Q9ULL1 1385 aa21.45■■□□□ 1.02
LTBP4-228ENST00000600499 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
LTBP4-228ENST00000600499 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
LTBP4-228ENST00000600499 PPLO60437 1756 aa21.38■■□□□ 1.01
LTBP4-228ENST00000600499 VGFO15240 615 aaPredicted RBP21.37■■□□□ 1.01
LTBP4-228ENST00000600499 IFT172Q9UG01 1749 aa21.37■■□□□ 1.01
LTBP4-228ENST00000600499 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
LTBP4-228ENST00000600499 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
LTBP4-228ENST00000600499 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
LTBP4-228ENST00000600499 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
LTBP4-228ENST00000600499 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
LTBP4-228ENST00000600499 NRXN3Q9Y4C0 1643 aa21.34■■□□□ 1.01
LTBP4-228ENST00000600499 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
LTBP4-228ENST00000600499 RGL3Q3MIN7 710 aa21.33■■□□□ 1.01
LTBP4-228ENST00000600499 NUTM2DQ5VT03 806 aaPredicted RBP21.33■■□□□ 1.01
LTBP4-228ENST00000600499 STAC3Q96MF2 364 aa21.33■■□□□ 1.01
LTBP4-228ENST00000600499 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
LTBP4-228ENST00000600499 PIK3R4Q99570 1358 aa21.31■■□□□ 1
LTBP4-228ENST00000600499 MYOM2P54296 1465 aa21.31■■□□□ 1
LTBP4-228ENST00000600499 NRXN1Q9ULB1 1477 aa21.31■■□□□ 1
LTBP4-228ENST00000600499 SLC26A8Q96RN1 970 aa21.3■■□□□ 1
LTBP4-228ENST00000600499 CPS1P31327 1500 aa21.28■■□□□ 1
LTBP4-228ENST00000600499 ADGRF5Q8IZF2 1346 aa21.28■■□□□ 1
LTBP4-228ENST00000600499 KCNA6P17658 529 aa21.27■■□□□ 1
LTBP4-228ENST00000600499 STRCP1A6NGW2 1772 aa21.27■■□□□ 1
LTBP4-228ENST00000600499 NWD1Q149M9 1564 aa21.27■□□□□ 0.99
LTBP4-228ENST00000600499 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
LTBP4-228ENST00000600499 CHD2O14647 1828 aaKnown RBP21.25■□□□□ 0.99
LTBP4-228ENST00000600499 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
LTBP4-228ENST00000600499 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
LTBP4-228ENST00000600499 BCANQ96GW7 911 aa21.24■□□□□ 0.99
LTBP4-228ENST00000600499 SIN3AQ96ST3 1273 aa21.24■□□□□ 0.99
LTBP4-228ENST00000600499 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
LTBP4-228ENST00000600499 CLSPNQ9HAW4 1339 aa21.24■□□□□ 0.99
LTBP4-228ENST00000600499 CERKQ8TCT0 537 aa21.22■□□□□ 0.99
LTBP4-228ENST00000600499 METP08581 1390 aa21.21■□□□□ 0.99
LTBP4-228ENST00000600499 PRAG1Q86YV5 1406 aa21.21■□□□□ 0.99
LTBP4-228ENST00000600499 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
LTBP4-228ENST00000600499 PTPRUQ92729 1446 aa21.2■□□□□ 0.98
LTBP4-228ENST00000600499 DCAF11Q8TEB1 546 aa21.19■□□□□ 0.98
LTBP4-228ENST00000600499 C14orf93Q9H972 538 aaKnown RBP21.19■□□□□ 0.98
LTBP4-228ENST00000600499 LRRC7Q96NW7 1537 aa21.19■□□□□ 0.98
LTBP4-228ENST00000600499 XRN1Q8IZH2 1706 aaKnown RBP21.17■□□□□ 0.98
LTBP4-228ENST00000600499 LAMC1P11047 1609 aa21.16■□□□□ 0.98
LTBP4-228ENST00000600499 L3MBTL2Q969R5 705 aa21.16■□□□□ 0.98
LTBP4-228ENST00000600499 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
LTBP4-228ENST00000600499 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
LTBP4-228ENST00000600499 NCOA3Q9Y6Q9 1424 aa21.14■□□□□ 0.98
LTBP4-228ENST00000600499 NEUROD1Q13562 356 aa21.14■□□□□ 0.97
LTBP4-228ENST00000600499 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
LTBP4-228ENST00000600499 ASXL1Q8IXJ9 1541 aa21.13■□□□□ 0.97
LTBP4-228ENST00000600499 XIRP1Q702N8 1843 aaKnown RBP21.12■□□□□ 0.97
LTBP4-228ENST00000600499 CFAP70Q5T0N1 1121 aa21.11■□□□□ 0.97
LTBP4-228ENST00000600499 TECPR2O15040 1411 aa21.11■□□□□ 0.97
LTBP4-228ENST00000600499 PTCH1Q13635 1447 aa21.11■□□□□ 0.97
LTBP4-228ENST00000600499 KIAA1210Q9ULL0 1709 aa21.1■□□□□ 0.97
LTBP4-228ENST00000600499 ADGRB1O14514 1584 aa21.1■□□□□ 0.97
LTBP4-228ENST00000600499 LRPPRCP42704 1394 aaKnown RBP21.1■□□□□ 0.97
LTBP4-228ENST00000600499 ABCC11Q96J66 1382 aa21.1■□□□□ 0.97
LTBP4-228ENST00000600499 PROSER2Q86WR7 435 aaPredicted RBP21.09■□□□□ 0.97
LTBP4-228ENST00000600499 TMEM94Q12767 1356 aa21.09■□□□□ 0.97
LTBP4-228ENST00000600499 SIRT1Q96EB6 747 aa21.07■□□□□ 0.96
LTBP4-228ENST00000600499 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
LTBP4-228ENST00000600499 YTHDC2Q9H6S0 1430 aaKnown RBP21.06■□□□□ 0.96
LTBP4-228ENST00000600499 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
LTBP4-228ENST00000600499 TMEM132EQ6IEE7 984 aa21.05■□□□□ 0.96
LTBP4-228ENST00000600499 TONSLQ96HA7 1378 aa21.05■□□□□ 0.96
LTBP4-228ENST00000600499 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
LTBP4-228ENST00000600499 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
LTBP4-228ENST00000600499 FBXO41Q8TF61 875 aa21.02■□□□□ 0.96
LTBP4-228ENST00000600499 DLC1Q96QB1 1528 aa21.02■□□□□ 0.96
LTBP4-228ENST00000600499 FAM135BQ49AJ0 1406 aa21.02■□□□□ 0.96
LTBP4-228ENST00000600499 C19orf44Q9H6X5 657 aa20.99■□□□□ 0.95
LTBP4-228ENST00000600499 TRPM1Q7Z4N2 1603 aa20.99■□□□□ 0.95
LTBP4-228ENST00000600499 DCCP43146 1447 aa20.98■□□□□ 0.95
LTBP4-228ENST00000600499 NBPF8Q3BBV2 869 aa20.98■□□□□ 0.95
LTBP4-228ENST00000600499 ADGRL3Q9HAR2 1447 aa20.97■□□□□ 0.95
LTBP4-228ENST00000600499 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
LTBP4-228ENST00000600499 MSH6P52701 1360 aa20.97■□□□□ 0.95
LTBP4-228ENST00000600499 TOM1O60784 492 aa20.96■□□□□ 0.95
LTBP4-228ENST00000600499 NBPF1Q3BBV0 1214 aa20.96■□□□□ 0.95
LTBP4-228ENST00000600499 GPRASP1Q5JY77 1395 aa20.96■□□□□ 0.95
LTBP4-228ENST00000600499 STK26Q9P289 416 aa20.95■□□□□ 0.94
LTBP4-228ENST00000600499 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.95■□□□□ 0.94
LTBP4-228ENST00000600499 NALCNQ8IZF0 1738 aa20.93■□□□□ 0.94
LTBP4-228ENST00000600499 UBAP1LF5GYI3 381 aa20.93■□□□□ 0.94
LTBP4-228ENST00000600499 WAPLQ7Z5K2 1190 aa20.92■□□□□ 0.94
LTBP4-228ENST00000600499 PLEKHH1Q9ULM0 1364 aa20.92■□□□□ 0.94
LTBP4-228ENST00000600499 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
LTBP4-228ENST00000600499 RALGAPBQ86X10 1494 aa20.91■□□□□ 0.94
LTBP4-228ENST00000600499 ARHGEF28Q8N1W1 1705 aaKnown RBP20.9■□□□□ 0.94
LTBP4-228ENST00000600499 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms