RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 LRRC7Q96NW7 1537 aa23.5■■□□□ 1.35
IRF3-226ENST00000600453 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
IRF3-226ENST00000600453 TMEM131LA2VDJ0 1609 aa23.49■■□□□ 1.35
IRF3-226ENST00000600453 PIP4K2BP78356 416 aa23.49■■□□□ 1.35
IRF3-226ENST00000600453 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
IRF3-226ENST00000600453 ZFYVE9O95405 1425 aa23.48■■□□□ 1.35
IRF3-226ENST00000600453 STRCP1A6NGW2 1772 aa23.47■■□□□ 1.35
IRF3-226ENST00000600453 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
IRF3-226ENST00000600453 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
IRF3-226ENST00000600453 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
IRF3-226ENST00000600453 PROSER2Q86WR7 435 aaPredicted RBP23.43■■□□□ 1.34
IRF3-226ENST00000600453 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
IRF3-226ENST00000600453 ZNF326Q5BKZ1 582 aaKnown RBP23.41■■□□□ 1.34
IRF3-226ENST00000600453 SPHKAPQ2M3C7 1700 aa23.41■■□□□ 1.34
IRF3-226ENST00000600453 NUTM2DQ5VT03 806 aaPredicted RBP23.38■■□□□ 1.33
IRF3-226ENST00000600453 TMEM94Q12767 1356 aa23.37■■□□□ 1.33
IRF3-226ENST00000600453 HSPA1LP34931 641 aa23.36■■□□□ 1.33
IRF3-226ENST00000600453 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
IRF3-226ENST00000600453 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
IRF3-226ENST00000600453 NKTRP30414 1462 aaKnown RBP23.35■■□□□ 1.33
IRF3-226ENST00000600453 DISP3Q9P2K9 1392 aa23.34■■□□□ 1.33
IRF3-226ENST00000600453 TRPM2O94759 1503 aa23.33■■□□□ 1.32
IRF3-226ENST00000600453 CHD2O14647 1828 aaKnown RBP23.31■■□□□ 1.32
IRF3-226ENST00000600453 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
IRF3-226ENST00000600453 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
IRF3-226ENST00000600453 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
IRF3-226ENST00000600453 ADAMTS13Q76LX8 1427 aa23.3■■□□□ 1.32
IRF3-226ENST00000600453 KIF1BO60333 1816 aa23.29■■□□□ 1.32
IRF3-226ENST00000600453 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
IRF3-226ENST00000600453 NCOA3Q9Y6Q9 1424 aa23.29■■□□□ 1.32
IRF3-226ENST00000600453 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
IRF3-226ENST00000600453 RPGRIP1LQ68CZ1 1315 aa23.29■■□□□ 1.32
IRF3-226ENST00000600453 MSH6P52701 1360 aa23.28■■□□□ 1.32
IRF3-226ENST00000600453 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
IRF3-226ENST00000600453 CLTCL1P53675 1640 aa23.26■■□□□ 1.31
IRF3-226ENST00000600453 RBM33Q96EV2 1170 aaKnown RBP23.26■■□□□ 1.31
IRF3-226ENST00000600453 AMOTL2Q9Y2J4 779 aa23.26■■□□□ 1.31
IRF3-226ENST00000600453 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
IRF3-226ENST00000600453 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
IRF3-226ENST00000600453 SETD5Q9C0A6 1442 aa23.25■■□□□ 1.31
IRF3-226ENST00000600453 C19orf44Q9H6X5 657 aa23.22■■□□□ 1.31
IRF3-226ENST00000600453 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
IRF3-226ENST00000600453 SETBP1Q9Y6X0 1596 aa23.21■■□□□ 1.31
IRF3-226ENST00000600453 FOXD1Q16676 465 aa23.2■■□□□ 1.3
IRF3-226ENST00000600453 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
IRF3-226ENST00000600453 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
IRF3-226ENST00000600453 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
IRF3-226ENST00000600453 ATF3P18847 181 aa23.18■■□□□ 1.3
IRF3-226ENST00000600453 PTPRUQ92729 1446 aa23.15■■□□□ 1.3
IRF3-226ENST00000600453 METP08581 1390 aa23.14■■□□□ 1.29
IRF3-226ENST00000600453 NRXN3Q9Y4C0 1643 aa23.13■■□□□ 1.29
IRF3-226ENST00000600453 HRCP23327 699 aa23.13■■□□□ 1.29
IRF3-226ENST00000600453 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
IRF3-226ENST00000600453 RAB3GAP2Q9H2M9 1393 aa23.11■■□□□ 1.29
IRF3-226ENST00000600453 ANKRD30BQ9BXX2 1392 aa23.09■■□□□ 1.29
IRF3-226ENST00000600453 ROBO1Q9Y6N7 1651 aa23.09■■□□□ 1.29
IRF3-226ENST00000600453 ILDR2Q71H61 639 aa23.08■■□□□ 1.29
IRF3-226ENST00000600453 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
IRF3-226ENST00000600453 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
IRF3-226ENST00000600453 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.06■■□□□ 1.28
IRF3-226ENST00000600453 PPLO60437 1756 aa23.06■■□□□ 1.28
IRF3-226ENST00000600453 DCCP43146 1447 aa23.06■■□□□ 1.28
IRF3-226ENST00000600453 SPATA31E1Q6ZUB1 1445 aa23.05■■□□□ 1.28
IRF3-226ENST00000600453 MED1Q15648 1581 aaPredicted RBP23.05■■□□□ 1.28
IRF3-226ENST00000600453 ADGRF5Q8IZF2 1346 aa23.01■■□□□ 1.27
IRF3-226ENST00000600453 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
IRF3-226ENST00000600453 ADGRL3Q9HAR2 1447 aa22.99■■□□□ 1.27
IRF3-226ENST00000600453 SOCS7O14512 581 aa22.98■■□□□ 1.27
IRF3-226ENST00000600453 JCADQ9P266 1359 aa22.97■■□□□ 1.27
IRF3-226ENST00000600453 PHLPP1O60346 1717 aa22.96■■□□□ 1.27
IRF3-226ENST00000600453 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
IRF3-226ENST00000600453 PRAG1Q86YV5 1406 aa22.96■■□□□ 1.27
IRF3-226ENST00000600453 SETD1AO15047 1707 aaKnown RBP22.95■■□□□ 1.26
IRF3-226ENST00000600453 ROBO2Q9HCK4 1378 aa22.94■■□□□ 1.26
IRF3-226ENST00000600453 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
IRF3-226ENST00000600453 MST1RQ04912 1400 aa22.92■■□□□ 1.26
IRF3-226ENST00000600453 IFT172Q9UG01 1749 aa22.91■■□□□ 1.26
IRF3-226ENST00000600453 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
IRF3-226ENST00000600453 PIK3C2GO75747 1445 aa22.91■■□□□ 1.26
IRF3-226ENST00000600453 ABCC11Q96J66 1382 aa22.9■■□□□ 1.26
IRF3-226ENST00000600453 STK26Q9P289 416 aa22.9■■□□□ 1.26
IRF3-226ENST00000600453 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
IRF3-226ENST00000600453 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.26
IRF3-226ENST00000600453 SPATA31A6Q5VVP1 1343 aa22.89■■□□□ 1.26
IRF3-226ENST00000600453 SIRT1Q96EB6 747 aa22.89■■□□□ 1.25
IRF3-226ENST00000600453 TMEM132EQ6IEE7 984 aa22.88■■□□□ 1.25
IRF3-226ENST00000600453 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
IRF3-226ENST00000600453 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
IRF3-226ENST00000600453 COL16A1Q07092 1604 aaPredicted RBP22.86■■□□□ 1.25
IRF3-226ENST00000600453 NALCNQ8IZF0 1738 aa22.86■■□□□ 1.25
IRF3-226ENST00000600453 TECPR2O15040 1411 aa22.86■■□□□ 1.25
IRF3-226ENST00000600453 MYOM2P54296 1465 aa22.85■■□□□ 1.25
IRF3-226ENST00000600453 ASXL1Q8IXJ9 1541 aa22.85■■□□□ 1.25
IRF3-226ENST00000600453 CFAP70Q5T0N1 1121 aa22.84■■□□□ 1.25
IRF3-226ENST00000600453 C1orf167Q5SNV9 1468 aa22.84■■□□□ 1.25
IRF3-226ENST00000600453 NRXN1Q9ULB1 1477 aa22.84■■□□□ 1.25
IRF3-226ENST00000600453 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.25
IRF3-226ENST00000600453 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
IRF3-226ENST00000600453 DCAF11Q8TEB1 546 aa22.83■■□□□ 1.25
IRF3-226ENST00000600453 RGS17Q9UGC6 210 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms