RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 TPM2P07951 284 aa20.37■□□□□ 0.85
SYDE1-204ENST00000600440 DDX11L8A8MPP1 907 aa20.36■□□□□ 0.85
SYDE1-204ENST00000600440 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
SYDE1-204ENST00000600440 CAMSAP2Q08AD1 1489 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 E9PSI1 815 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
SYDE1-204ENST00000600440 E9PCH4 1651 aa20.34■□□□□ 0.85
SYDE1-204ENST00000600440 RLBP1P12271 317 aa20.34■□□□□ 0.85
SYDE1-204ENST00000600440 R3HCC1Q9Y3T6 440 aaKnown RBP20.34■□□□□ 0.85
SYDE1-204ENST00000600440 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
SYDE1-204ENST00000600440 MSNP26038 577 aaKnown RBP20.33■□□□□ 0.84
SYDE1-204ENST00000600440 TSPY4P0CV99 314 aa20.33■□□□□ 0.84
SYDE1-204ENST00000600440 TSPY10P0CW01 314 aa20.33■□□□□ 0.84
SYDE1-204ENST00000600440 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.84
SYDE1-204ENST00000600440 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
SYDE1-204ENST00000600440 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
SYDE1-204ENST00000600440 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
SYDE1-204ENST00000600440 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
SYDE1-204ENST00000600440 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
SYDE1-204ENST00000600440 TNPO1Q92973 898 aaKnown RBP20.31■□□□□ 0.84
SYDE1-204ENST00000600440 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
SYDE1-204ENST00000600440 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
SYDE1-204ENST00000600440 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
SYDE1-204ENST00000600440 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
SYDE1-204ENST00000600440 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
SYDE1-204ENST00000600440 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.84
SYDE1-204ENST00000600440 CCDC144AA2RUR9 1427 aa20.26■□□□□ 0.83
SYDE1-204ENST00000600440 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
SYDE1-204ENST00000600440 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
SYDE1-204ENST00000600440 PRAG1Q86YV5 1406 aa20.26■□□□□ 0.83
SYDE1-204ENST00000600440 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
SYDE1-204ENST00000600440 GBP4Q96PP9 640 aa20.25■□□□□ 0.83
SYDE1-204ENST00000600440 ZHX1Q9UKY1 873 aaPredicted RBP20.25■□□□□ 0.83
SYDE1-204ENST00000600440 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
SYDE1-204ENST00000600440 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
SYDE1-204ENST00000600440 WDR62O43379 1518 aa20.24■□□□□ 0.83
SYDE1-204ENST00000600440 RIPK4P57078 832 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
SYDE1-204ENST00000600440 ZSCAN30Q86W11 494 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
SYDE1-204ENST00000600440 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 INSRP06213 1382 aa20.22■□□□□ 0.83
SYDE1-204ENST00000600440 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
SYDE1-204ENST00000600440 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
SYDE1-204ENST00000600440 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
SYDE1-204ENST00000600440 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
SYDE1-204ENST00000600440 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
SYDE1-204ENST00000600440 MAGI2Q86UL8 1455 aa20.2■□□□□ 0.82
SYDE1-204ENST00000600440 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
SYDE1-204ENST00000600440 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
SYDE1-204ENST00000600440 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.19■□□□□ 0.82
SYDE1-204ENST00000600440 PRDM4Q9UKN5 801 aa20.19■□□□□ 0.82
SYDE1-204ENST00000600440 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
SYDE1-204ENST00000600440 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
SYDE1-204ENST00000600440 UQCRHP07919 91 aa20.18■□□□□ 0.82
SYDE1-204ENST00000600440 OFD1O75665 1012 aa20.18■□□□□ 0.82
SYDE1-204ENST00000600440 SSFA2P28290 1259 aa20.17■□□□□ 0.82
SYDE1-204ENST00000600440 ISY1Q9ULR0 285 aaKnown RBP20.17■□□□□ 0.82
SYDE1-204ENST00000600440 C9orf84Q5VXU9 1444 aa20.16■□□□□ 0.82
SYDE1-204ENST00000600440 IQGAP2Q13576 1575 aa20.16■□□□□ 0.82
SYDE1-204ENST00000600440 GPATCH8Q9UKJ3 1502 aaKnown RBP20.15■□□□□ 0.82
SYDE1-204ENST00000600440 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
SYDE1-204ENST00000600440 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
SYDE1-204ENST00000600440 GOLGA6L22H0YM25 854 aa20.14■□□□□ 0.82
SYDE1-204ENST00000600440 RBM42Q9BTD8 480 aaKnown RBP20.14■□□□□ 0.82
SYDE1-204ENST00000600440 LNPKQ9C0E8 428 aa20.14■□□□□ 0.81
SYDE1-204ENST00000600440 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
SYDE1-204ENST00000600440 CAVIN1Q6NZI2 390 aaKnown RBP20.13■□□□□ 0.81
SYDE1-204ENST00000600440 CD2BP2O95400 341 aaKnown RBP20.13■□□□□ 0.81
SYDE1-204ENST00000600440 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
SYDE1-204ENST00000600440 MPNDQ8N594 471 aa20.11■□□□□ 0.81
SYDE1-204ENST00000600440 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
SYDE1-204ENST00000600440 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 TCP11L2Q8N4U5 519 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 A2MP01023 1474 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
SYDE1-204ENST00000600440 ADGBQ8N7X0 1667 aa20.09■□□□□ 0.81
SYDE1-204ENST00000600440 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
SYDE1-204ENST00000600440 ADGRL2O95490 1459 aa20.08■□□□□ 0.8
SYDE1-204ENST00000600440 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
SYDE1-204ENST00000600440 TSR2Q969E8 191 aaKnown RBP20.08■□□□□ 0.8
SYDE1-204ENST00000600440 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
SYDE1-204ENST00000600440 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 PPP1R9BQ96SB3 815 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 NINLQ9Y2I6 1382 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 DNTTIP2Q5QJE6 756 aaKnown RBP20.06■□□□□ 0.8
SYDE1-204ENST00000600440 JARID2Q92833 1246 aaPredicted RBP20.06■□□□□ 0.8
SYDE1-204ENST00000600440 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
SYDE1-204ENST00000600440 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
SYDE1-204ENST00000600440 CDCA8Q53HL2 280 aa20.06■□□□□ 0.8
SYDE1-204ENST00000600440 FBLN2P98095 1184 aa20.05■□□□□ 0.8
SYDE1-204ENST00000600440 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
SYDE1-204ENST00000600440 SMC5Q8IY18 1101 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms