RNA–Protein interactions for RNA: ENST00000597088.1

PRKD2-207, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-207ENST00000597088 ZNF335Q9H4Z2 1342 aaPredicted RBP35.83■■■■□ 3.33
PRKD2-207ENST00000597088 CCDC144AA2RUR9 1427 aa35.83■■■■□ 3.33
PRKD2-207ENST00000597088 LTBP4Q8N2S1 1624 aa35.83■■■■□ 3.33
PRKD2-207ENST00000597088 ZNF326Q5BKZ1 582 aaKnown RBP35.79■■■■□ 3.32
PRKD2-207ENST00000597088 PPP1R15AO75807 674 aaPredicted RBP35.78■■■■□ 3.32
PRKD2-207ENST00000597088 HDGFP51858 240 aaKnown RBP35.78■■■■□ 3.32
PRKD2-207ENST00000597088 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.78■■■■□ 3.32
PRKD2-207ENST00000597088 NUTM2DQ5VT03 806 aaPredicted RBP35.77■■■■□ 3.32
PRKD2-207ENST00000597088 PLEKHG1Q9ULL1 1385 aa35.76■■■■□ 3.32
PRKD2-207ENST00000597088 NEXMIFQ5QGS0 1516 aa35.76■■■■□ 3.31
PRKD2-207ENST00000597088 SENP3Q9H4L4 574 aaPredicted RBP35.73■■■■□ 3.31
PRKD2-207ENST00000597088 CERKQ8TCT0 537 aa35.7■■■■□ 3.31
PRKD2-207ENST00000597088 BCANQ96GW7 911 aa35.7■■■■□ 3.31
PRKD2-207ENST00000597088 STRCP1A6NGW2 1772 aa35.69■■■■□ 3.3
PRKD2-207ENST00000597088 SPATA31E1Q6ZUB1 1445 aa35.69■■■■□ 3.3
PRKD2-207ENST00000597088 ANKRD30BQ9BXX2 1392 aa35.69■■■■□ 3.3
PRKD2-207ENST00000597088 SLC26A8Q96RN1 970 aa35.68■■■■□ 3.3
PRKD2-207ENST00000597088 PPLO60437 1756 aa35.67■■■■□ 3.3
PRKD2-207ENST00000597088 CPS1P31327 1500 aa35.65■■■■□ 3.3
PRKD2-207ENST00000597088 NRXN3Q9Y4C0 1643 aa35.63■■■■□ 3.29
PRKD2-207ENST00000597088 ADAMTS13Q76LX8 1427 aa35.62■■■■□ 3.29
PRKD2-207ENST00000597088 DIP2AQ14689 1571 aa35.62■■■■□ 3.29
PRKD2-207ENST00000597088 SETBP1Q9Y6X0 1596 aa35.62■■■■□ 3.29
PRKD2-207ENST00000597088 IFT172Q9UG01 1749 aa35.6■■■■□ 3.29
PRKD2-207ENST00000597088 RPGRIP1LQ68CZ1 1315 aa35.6■■■■□ 3.29
PRKD2-207ENST00000597088 RGL3Q3MIN7 710 aa35.59■■■■□ 3.29
PRKD2-207ENST00000597088 IQSEC2Q5JU85 1478 aa35.56■■■■□ 3.28
PRKD2-207ENST00000597088 NWD1Q149M9 1564 aa35.55■■■■□ 3.28
PRKD2-207ENST00000597088 TBX22Q9Y458 520 aa35.54■■■■□ 3.28
PRKD2-207ENST00000597088 VGFO15240 615 aaPredicted RBP35.53■■■■□ 3.28
PRKD2-207ENST00000597088 CHD2O14647 1828 aaKnown RBP35.52■■■■□ 3.28
PRKD2-207ENST00000597088 LRRC7Q96NW7 1537 aa35.5■■■■□ 3.27
PRKD2-207ENST00000597088 KCNA6P17658 529 aa35.49■■■■□ 3.27
PRKD2-207ENST00000597088 DHX57Q6P158 1386 aaKnown RBP35.46■■■■□ 3.27
PRKD2-207ENST00000597088 NKTRP30414 1462 aaKnown RBP35.45■■■■□ 3.27
PRKD2-207ENST00000597088 SETD1AO15047 1707 aaKnown RBP35.45■■■■□ 3.27
PRKD2-207ENST00000597088 PIK3R4Q99570 1358 aa35.44■■■■□ 3.26
PRKD2-207ENST00000597088 ADGRF5Q8IZF2 1346 aa35.43■■■■□ 3.26
PRKD2-207ENST00000597088 FBXO41Q8TF61 875 aa35.43■■■■□ 3.26
PRKD2-207ENST00000597088 ALKQ9UM73 1620 aa35.43■■■■□ 3.26
PRKD2-207ENST00000597088 XIRP1Q702N8 1843 aaKnown RBP35.42■■■■□ 3.26
PRKD2-207ENST00000597088 METP08581 1390 aa35.4■■■■□ 3.26
PRKD2-207ENST00000597088 MYOM2P54296 1465 aa35.4■■■■□ 3.26
PRKD2-207ENST00000597088 PTPRUQ92729 1446 aa35.4■■■■□ 3.26
PRKD2-207ENST00000597088 PCGF6Q9BYE7 350 aa35.38■■■■□ 3.25
PRKD2-207ENST00000597088 XRN1Q8IZH2 1706 aaKnown RBP35.37■■■■□ 3.25
PRKD2-207ENST00000597088 PIK3C2GO75747 1445 aa35.36■■■■□ 3.25
PRKD2-207ENST00000597088 ILDR1Q86SU0 546 aaPredicted RBP35.36■■■■□ 3.25
PRKD2-207ENST00000597088 NRXN1Q9ULB1 1477 aa35.35■■■■□ 3.25
PRKD2-207ENST00000597088 PROSER2Q86WR7 435 aaPredicted RBP35.33■■■■□ 3.25
PRKD2-207ENST00000597088 TMEM94Q12767 1356 aa35.33■■■■□ 3.25
PRKD2-207ENST00000597088 AMOTL2Q9Y2J4 779 aa35.31■■■■□ 3.24
PRKD2-207ENST00000597088 RBM33Q96EV2 1170 aaKnown RBP35.3■■■■□ 3.24
PRKD2-207ENST00000597088 UBAP1LF5GYI3 381 aa35.27■■■■□ 3.24
PRKD2-207ENST00000597088 LAMC1P11047 1609 aa35.26■■■■□ 3.24
PRKD2-207ENST00000597088 DCAF11Q8TEB1 546 aa35.26■■■■□ 3.24
PRKD2-207ENST00000597088 SIN3AQ96ST3 1273 aa35.25■■■■□ 3.23
PRKD2-207ENST00000597088 ASXL1Q8IXJ9 1541 aa35.24■■■■□ 3.23
PRKD2-207ENST00000597088 KDM2AQ9Y2K7 1162 aa35.23■■■■□ 3.23
PRKD2-207ENST00000597088 PRAG1Q86YV5 1406 aa35.17■■■■□ 3.22
PRKD2-207ENST00000597088 TOM1O60784 492 aa35.17■■■■□ 3.22
PRKD2-207ENST00000597088 NEUROD1Q13562 356 aa35.17■■■■□ 3.22
PRKD2-207ENST00000597088 STAC3Q96MF2 364 aa35.17■■■■□ 3.22
PRKD2-207ENST00000597088 C14orf93Q9H972 538 aaKnown RBP35.17■■■■□ 3.22
PRKD2-207ENST00000597088 PTCH1Q13635 1447 aa35.16■■■■□ 3.22
PRKD2-207ENST00000597088 NCOA3Q9Y6Q9 1424 aa35.16■■■■□ 3.22
PRKD2-207ENST00000597088 CFAP70Q5T0N1 1121 aa35.16■■■■□ 3.22
PRKD2-207ENST00000597088 TMEM132EQ6IEE7 984 aa35.14■■■■□ 3.22
PRKD2-207ENST00000597088 MSH6P52701 1360 aa35.13■■■■□ 3.21
PRKD2-207ENST00000597088 ROBO2Q9HCK4 1378 aa35.13■■■■□ 3.21
PRKD2-207ENST00000597088 KNDC1Q76NI1 1749 aa35.12■■■■□ 3.21
PRKD2-207ENST00000597088 C14orf37Q86TY3 774 aa35.12■■■■□ 3.21
PRKD2-207ENST00000597088 LRPPRCP42704 1394 aaKnown RBP35.11■■■■□ 3.21
PRKD2-207ENST00000597088 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.1■■■■□ 3.21
PRKD2-207ENST00000597088 YTHDC2Q9H6S0 1430 aaKnown RBP35.09■■■■□ 3.21
PRKD2-207ENST00000597088 PIP4K2BP78356 416 aa35.09■■■■□ 3.21
PRKD2-207ENST00000597088 NALCNQ8IZF0 1738 aa35.09■■■■□ 3.21
PRKD2-207ENST00000597088 STK26Q9P289 416 aa35.08■■■■□ 3.21
PRKD2-207ENST00000597088 SCAF1Q9H7N4 1312 aaKnown RBP35.07■■■■□ 3.21
PRKD2-207ENST00000597088 TECPR2O15040 1411 aa35.07■■■■□ 3.21
PRKD2-207ENST00000597088 L3MBTL2Q969R5 705 aa35.07■■■■□ 3.2
PRKD2-207ENST00000597088 ADGRB1O14514 1584 aa35.07■■■■□ 3.2
PRKD2-207ENST00000597088 ABCC11Q96J66 1382 aa35.04■■■■□ 3.2
PRKD2-207ENST00000597088 ADGRL3Q9HAR2 1447 aa35.03■■■■□ 3.2
PRKD2-207ENST00000597088 KIAA1210Q9ULL0 1709 aa35.03■■■■□ 3.2
PRKD2-207ENST00000597088 C19orf44Q9H6X5 657 aa35.02■■■■□ 3.2
PRKD2-207ENST00000597088 DCCP43146 1447 aa34.98■■■■□ 3.19
PRKD2-207ENST00000597088 ATF3P18847 181 aa34.95■■■■□ 3.19
PRKD2-207ENST00000597088 CADPS2Q86UW7 1296 aa34.94■■■■□ 3.18
PRKD2-207ENST00000597088 PLEKHH1Q9ULM0 1364 aa34.94■■■■□ 3.18
PRKD2-207ENST00000597088 ROBO1Q9Y6N7 1651 aa34.93■■■■□ 3.18
PRKD2-207ENST00000597088 DLC1Q96QB1 1528 aa34.93■■■■□ 3.18
PRKD2-207ENST00000597088 FAM135BQ49AJ0 1406 aa34.93■■■■□ 3.18
PRKD2-207ENST00000597088 TONSLQ96HA7 1378 aa34.93■■■■□ 3.18
PRKD2-207ENST00000597088 WAPLQ7Z5K2 1190 aa34.93■■■■□ 3.18
PRKD2-207ENST00000597088 SLAIN2Q9P270 581 aa34.91■■■■□ 3.18
PRKD2-207ENST00000597088 TRPM1Q7Z4N2 1603 aa34.88■■■■□ 3.17
PRKD2-207ENST00000597088 SIRT1Q96EB6 747 aa34.88■■■■□ 3.17
PRKD2-207ENST00000597088 TRAK1Q9UPV9 953 aa34.87■■■■□ 3.17
PRKD2-207ENST00000597088 CDC42BPGQ6DT37 1551 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms