RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 KDM5AP29375 1690 aaKnown RBP21.62■■□□□ 1.05
ARHGEF1-214ENST00000596957 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
ARHGEF1-214ENST00000596957 RPGRIP1LQ68CZ1 1315 aa21.61■■□□□ 1.05
ARHGEF1-214ENST00000596957 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
ARHGEF1-214ENST00000596957 NCKAP5LQ9HCH0 1330 aa21.59■■□□□ 1.05
ARHGEF1-214ENST00000596957 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
ARHGEF1-214ENST00000596957 SLIT1O75093 1534 aa21.58■■□□□ 1.04
ARHGEF1-214ENST00000596957 ARHGAP23Q9P227 1491 aa21.58■■□□□ 1.04
ARHGEF1-214ENST00000596957 VGFO15240 615 aaPredicted RBP21.57■■□□□ 1.04
ARHGEF1-214ENST00000596957 LTKP29376 864 aa21.57■■□□□ 1.04
ARHGEF1-214ENST00000596957 DCAF11Q8TEB1 546 aa21.57■■□□□ 1.04
ARHGEF1-214ENST00000596957 KDM2AQ9Y2K7 1162 aa21.57■■□□□ 1.04
ARHGEF1-214ENST00000596957 SCAF11Q99590 1463 aaKnown RBP21.57■■□□□ 1.04
ARHGEF1-214ENST00000596957 NEURL4Q96JN8 1562 aa21.56■■□□□ 1.04
ARHGEF1-214ENST00000596957 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
ARHGEF1-214ENST00000596957 L3MBTL2Q969R5 705 aa21.53■■□□□ 1.04
ARHGEF1-214ENST00000596957 NEXMIFQ5QGS0 1516 aa21.53■■□□□ 1.04
ARHGEF1-214ENST00000596957 MYO5BQ9ULV0 1848 aa21.52■■□□□ 1.04
ARHGEF1-214ENST00000596957 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
ARHGEF1-214ENST00000596957 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
ARHGEF1-214ENST00000596957 PLEKHG1Q9ULL1 1385 aa21.49■■□□□ 1.03
ARHGEF1-214ENST00000596957 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
ARHGEF1-214ENST00000596957 ADGRF5Q8IZF2 1346 aa21.48■■□□□ 1.03
ARHGEF1-214ENST00000596957 TIMELESSQ9UNS1 1208 aa21.46■■□□□ 1.03
ARHGEF1-214ENST00000596957 MYOM2P54296 1465 aa21.45■■□□□ 1.03
ARHGEF1-214ENST00000596957 SLC26A8Q96RN1 970 aa21.45■■□□□ 1.02
ARHGEF1-214ENST00000596957 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF1-214ENST00000596957 MED14O60244 1454 aa21.44■■□□□ 1.02
ARHGEF1-214ENST00000596957 PPLO60437 1756 aa21.43■■□□□ 1.02
ARHGEF1-214ENST00000596957 STRCQ7RTU9 1775 aa21.4■■□□□ 1.02
ARHGEF1-214ENST00000596957 IFT172Q9UG01 1749 aa21.4■■□□□ 1.02
ARHGEF1-214ENST00000596957 IQGAP1P46940 1657 aa21.4■■□□□ 1.02
ARHGEF1-214ENST00000596957 PIK3C2GO75747 1445 aa21.39■■□□□ 1.02
ARHGEF1-214ENST00000596957 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
ARHGEF1-214ENST00000596957 SETBP1Q9Y6X0 1596 aa21.37■■□□□ 1.01
ARHGEF1-214ENST00000596957 CFAP70Q5T0N1 1121 aa21.37■■□□□ 1.01
ARHGEF1-214ENST00000596957 NRXN1Q9ULB1 1477 aa21.37■■□□□ 1.01
ARHGEF1-214ENST00000596957 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
ARHGEF1-214ENST00000596957 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
ARHGEF1-214ENST00000596957 C14orf93Q9H972 538 aaKnown RBP21.35■■□□□ 1.01
ARHGEF1-214ENST00000596957 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
ARHGEF1-214ENST00000596957 ALKQ9UM73 1620 aa21.33■■□□□ 1
ARHGEF1-214ENST00000596957 NRXN3Q9Y4C0 1643 aa21.31■■□□□ 1
ARHGEF1-214ENST00000596957 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
ARHGEF1-214ENST00000596957 TMEM132EQ6IEE7 984 aa21.31■■□□□ 1
ARHGEF1-214ENST00000596957 METP08581 1390 aa21.31■■□□□ 1
ARHGEF1-214ENST00000596957 PIK3R4Q99570 1358 aa21.29■■□□□ 1
ARHGEF1-214ENST00000596957 STK26Q9P289 416 aa21.29■■□□□ 1
ARHGEF1-214ENST00000596957 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
ARHGEF1-214ENST00000596957 ROCK2O75116 1388 aaKnown RBP21.28■■□□□ 1
ARHGEF1-214ENST00000596957 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
ARHGEF1-214ENST00000596957 LAMC1P11047 1609 aa21.28■■□□□ 1
ARHGEF1-214ENST00000596957 KCNA6P17658 529 aa21.27■■□□□ 1
ARHGEF1-214ENST00000596957 NBPF1Q3BBV0 1214 aa21.26■□□□□ 0.99
ARHGEF1-214ENST00000596957 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
ARHGEF1-214ENST00000596957 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
ARHGEF1-214ENST00000596957 LRPPRCP42704 1394 aaKnown RBP21.23■□□□□ 0.99
ARHGEF1-214ENST00000596957 PTPRUQ92729 1446 aa21.22■□□□□ 0.99
ARHGEF1-214ENST00000596957 YTHDC2Q9H6S0 1430 aaKnown RBP21.22■□□□□ 0.99
ARHGEF1-214ENST00000596957 RALGAPBQ86X10 1494 aa21.22■□□□□ 0.99
ARHGEF1-214ENST00000596957 TRAK1Q9UPV9 953 aa21.22■□□□□ 0.99
ARHGEF1-214ENST00000596957 ASXL1Q8IXJ9 1541 aa21.2■□□□□ 0.98
ARHGEF1-214ENST00000596957 PROSER2Q86WR7 435 aaPredicted RBP21.2■□□□□ 0.98
ARHGEF1-214ENST00000596957 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
ARHGEF1-214ENST00000596957 TRPM1Q7Z4N2 1603 aa21.19■□□□□ 0.98
ARHGEF1-214ENST00000596957 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
ARHGEF1-214ENST00000596957 KIAA1210Q9ULL0 1709 aa21.19■□□□□ 0.98
ARHGEF1-214ENST00000596957 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
ARHGEF1-214ENST00000596957 POGKQ9P215 609 aa21.17■□□□□ 0.98
ARHGEF1-214ENST00000596957 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
ARHGEF1-214ENST00000596957 NKTRP30414 1462 aaKnown RBP21.17■□□□□ 0.98
ARHGEF1-214ENST00000596957 NWD1Q149M9 1564 aa21.16■□□□□ 0.98
ARHGEF1-214ENST00000596957 CPS1P31327 1500 aa21.15■□□□□ 0.98
ARHGEF1-214ENST00000596957 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
ARHGEF1-214ENST00000596957 RBM33Q96EV2 1170 aaKnown RBP21.15■□□□□ 0.98
ARHGEF1-214ENST00000596957 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.98
ARHGEF1-214ENST00000596957 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.98
ARHGEF1-214ENST00000596957 PRAM1Q96QH2 718 aa21.14■□□□□ 0.97
ARHGEF1-214ENST00000596957 PTCH1Q13635 1447 aa21.13■□□□□ 0.97
ARHGEF1-214ENST00000596957 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
ARHGEF1-214ENST00000596957 TECPR2O15040 1411 aa21.12■□□□□ 0.97
ARHGEF1-214ENST00000596957 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
ARHGEF1-214ENST00000596957 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
ARHGEF1-214ENST00000596957 WAPLQ7Z5K2 1190 aa21.12■□□□□ 0.97
ARHGEF1-214ENST00000596957 CHD2O14647 1828 aaKnown RBP21.12■□□□□ 0.97
ARHGEF1-214ENST00000596957 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
ARHGEF1-214ENST00000596957 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
ARHGEF1-214ENST00000596957 LRRC7Q96NW7 1537 aa21.09■□□□□ 0.97
ARHGEF1-214ENST00000596957 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
ARHGEF1-214ENST00000596957 LTBP4Q8N2S1 1624 aa21.09■□□□□ 0.97
ARHGEF1-214ENST00000596957 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
ARHGEF1-214ENST00000596957 PLEKHH1Q9ULM0 1364 aa21.08■□□□□ 0.96
ARHGEF1-214ENST00000596957 STRCP1A6NGW2 1772 aa21.08■□□□□ 0.96
ARHGEF1-214ENST00000596957 USP47Q96K76 1375 aa21.07■□□□□ 0.96
ARHGEF1-214ENST00000596957 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
ARHGEF1-214ENST00000596957 MINK1Q8N4C8 1332 aaPredicted RBP21.05■□□□□ 0.96
ARHGEF1-214ENST00000596957 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
ARHGEF1-214ENST00000596957 MSH6P52701 1360 aa21.05■□□□□ 0.96
ARHGEF1-214ENST00000596957 CERKQ8TCT0 537 aa21.04■□□□□ 0.96
ARHGEF1-214ENST00000596957 NCOA3Q9Y6Q9 1424 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms