RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 ZNF777Q9ULD5 760 aaPredicted RBP29.18■■■□□ 2.26
SIN3B-209ENST00000596802 SPRYD3Q8NCJ5 442 aa29.18■■■□□ 2.26
SIN3B-209ENST00000596802 PRDM15P57071 1507 aaPredicted RBP29.18■■■□□ 2.26
SIN3B-209ENST00000596802 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
SIN3B-209ENST00000596802 PRG4Q92954 1404 aaPredicted RBP29.16■■■□□ 2.26
SIN3B-209ENST00000596802 PDE3AQ14432 1141 aa29.15■■■□□ 2.26
SIN3B-209ENST00000596802 LAMC1P11047 1609 aa29.15■■■□□ 2.26
SIN3B-209ENST00000596802 TPM2P07951 284 aa29.14■■■□□ 2.26
SIN3B-209ENST00000596802 PTPRGP23470 1445 aa29.14■■■□□ 2.26
SIN3B-209ENST00000596802 CHMP5Q9NZZ3 219 aa29.14■■■□□ 2.26
SIN3B-209ENST00000596802 TROQ12816 1431 aaPredicted RBP29.14■■■□□ 2.26
SIN3B-209ENST00000596802 CENPJQ9HC77 1338 aaPredicted RBP29.13■■■□□ 2.25
SIN3B-209ENST00000596802 ZMYM3Q14202 1370 aa29.12■■■□□ 2.25
SIN3B-209ENST00000596802 PDCL3Q9H2J4 239 aa29.12■■■□□ 2.25
SIN3B-209ENST00000596802 ISY1Q9ULR0 285 aaKnown RBP29.12■■■□□ 2.25
SIN3B-209ENST00000596802 TMF1P82094 1093 aa29.11■■■□□ 2.25
SIN3B-209ENST00000596802 COG6Q9Y2V7 657 aa29.11■■■□□ 2.25
SIN3B-209ENST00000596802 RAPGEF6Q8TEU7 1601 aa29.1■■■□□ 2.25
SIN3B-209ENST00000596802 MAGI2Q86UL8 1455 aa29.1■■■□□ 2.25
SIN3B-209ENST00000596802 CCDC146Q8IYE0 955 aa29.09■■■□□ 2.25
SIN3B-209ENST00000596802 PANK1Q8TE04 598 aa29.09■■■□□ 2.25
SIN3B-209ENST00000596802 NINLQ9Y2I6 1382 aa29.09■■■□□ 2.25
SIN3B-209ENST00000596802 E9PSI1 815 aa29.08■■■□□ 2.24
SIN3B-209ENST00000596802 TRIM44Q96DX7 344 aaPredicted RBP29.07■■■□□ 2.24
SIN3B-209ENST00000596802 APAF1O14727 1248 aa29.06■■■□□ 2.24
SIN3B-209ENST00000596802 C9orf84Q5VXU9 1444 aa29.05■■■□□ 2.24
SIN3B-209ENST00000596802 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
SIN3B-209ENST00000596802 DDX11L8A8MPP1 907 aa29.05■■■□□ 2.24
SIN3B-209ENST00000596802 WDR7Q9Y4E6 1490 aa29.05■■■□□ 2.24
SIN3B-209ENST00000596802 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
SIN3B-209ENST00000596802 RGL3Q3MIN7 710 aa29.04■■■□□ 2.24
SIN3B-209ENST00000596802 AMER1Q5JTC6 1135 aaPredicted RBP29.04■■■□□ 2.24
SIN3B-209ENST00000596802 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
SIN3B-209ENST00000596802 KNSTRNQ9Y448 316 aa29.04■■■□□ 2.24
SIN3B-209ENST00000596802 A2MP01023 1474 aa29.04■■■□□ 2.24
SIN3B-209ENST00000596802 DMRT2Q9Y5R5 561 aa29.04■■■□□ 2.24
SIN3B-209ENST00000596802 ABCC2Q92887 1545 aa29.03■■■□□ 2.24
SIN3B-209ENST00000596802 KIAA0556O60303 1618 aa29.03■■■□□ 2.24
SIN3B-209ENST00000596802 PIK3C2GO75747 1445 aa29.03■■■□□ 2.24
SIN3B-209ENST00000596802 CCDC144AA2RUR9 1427 aa29.02■■■□□ 2.24
SIN3B-209ENST00000596802 PMFBP1Q8TBY8 1022 aa29.02■■■□□ 2.24
SIN3B-209ENST00000596802 PDZRN3Q9UPQ7 1066 aa29.02■■■□□ 2.24
SIN3B-209ENST00000596802 DISP1Q96F81 1524 aa29.01■■■□□ 2.23
SIN3B-209ENST00000596802 CANXP27824 592 aaKnown RBP29.01■■■□□ 2.23
SIN3B-209ENST00000596802 ZNF692Q9BU19 519 aaPredicted RBP29.01■■■□□ 2.23
SIN3B-209ENST00000596802 CDC42BPAQ5VT25 1732 aa29■■■□□ 2.23
SIN3B-209ENST00000596802 PBRM1Q86U86 1689 aa29■■■□□ 2.23
SIN3B-209ENST00000596802 ADCY10Q96PN6 1610 aa29■■■□□ 2.23
SIN3B-209ENST00000596802 ADAMTS12P58397 1594 aa29■■■□□ 2.23
SIN3B-209ENST00000596802 PLXNC1O60486 1568 aa28.99■■■□□ 2.23
SIN3B-209ENST00000596802 GAS2L3Q86XJ1 694 aa28.99■■■□□ 2.23
SIN3B-209ENST00000596802 PCDHB15Q9Y5E8 787 aa28.99■■■□□ 2.23
SIN3B-209ENST00000596802 PODXL2Q9NZ53 605 aa28.99■■■□□ 2.23
SIN3B-209ENST00000596802 KIAA1211Q6ZU35 1233 aa28.98■■■□□ 2.23
SIN3B-209ENST00000596802 CALD1Q05682 793 aaKnown RBP28.98■■■□□ 2.23
SIN3B-209ENST00000596802 FAM135AQ9P2D6 1515 aa28.97■■■□□ 2.23
SIN3B-209ENST00000596802 C22orf23Q9BZE7 217 aa28.96■■■□□ 2.23
SIN3B-209ENST00000596802 EIF2AK4Q9P2K8 1649 aaKnown RBP28.94■■■□□ 2.22
SIN3B-209ENST00000596802 AAMPQ13685 434 aa28.92■■■□□ 2.22
SIN3B-209ENST00000596802 PRDM4Q9UKN5 801 aa28.92■■■□□ 2.22
SIN3B-209ENST00000596802 ASXL1Q8IXJ9 1541 aa28.91■■■□□ 2.22
SIN3B-209ENST00000596802 NCOA3Q9Y6Q9 1424 aa28.91■■■□□ 2.22
SIN3B-209ENST00000596802 DDIT3P35638 169 aa28.91■■■□□ 2.22
SIN3B-209ENST00000596802 PLA2R1Q13018 1463 aa28.9■■■□□ 2.22
SIN3B-209ENST00000596802 MFAP1P55081 439 aaKnown RBP28.89■■■□□ 2.21
SIN3B-209ENST00000596802 CCDC141Q6ZP82 1450 aa28.89■■■□□ 2.21
SIN3B-209ENST00000596802 MYO5CQ9NQX4 1742 aa28.88■■■□□ 2.21
SIN3B-209ENST00000596802 RLBP1P12271 317 aa28.88■■■□□ 2.21
SIN3B-209ENST00000596802 HSCBQ8IWL3 235 aa28.88■■■□□ 2.21
SIN3B-209ENST00000596802 NUP160Q12769 1436 aa28.88■■■□□ 2.21
SIN3B-209ENST00000596802 TSPY4P0CV99 314 aa28.87■■■□□ 2.21
SIN3B-209ENST00000596802 TSPY10P0CW01 314 aa28.87■■■□□ 2.21
SIN3B-209ENST00000596802 SYNMO15061 1565 aa28.86■■■□□ 2.21
SIN3B-209ENST00000596802 NGEFQ8N5V2 710 aa28.86■■■□□ 2.21
SIN3B-209ENST00000596802 TNNQ9UQP3 1299 aa28.86■■■□□ 2.21
SIN3B-209ENST00000596802 OFD1O75665 1012 aa28.85■■■□□ 2.21
SIN3B-209ENST00000596802 RIPK4P57078 832 aa28.85■■■□□ 2.21
SIN3B-209ENST00000596802 RNF17Q9BXT8 1623 aaKnown RBP28.85■■■□□ 2.21
SIN3B-209ENST00000596802 TNPO1Q92973 898 aaKnown RBP28.85■■■□□ 2.21
SIN3B-209ENST00000596802 RWDD1Q9H446 243 aaPredicted RBP28.84■■■□□ 2.21
SIN3B-209ENST00000596802 CCDC173Q0VFZ6 552 aa28.83■■■□□ 2.21
SIN3B-209ENST00000596802 ZSCAN30Q86W11 494 aa28.83■■■□□ 2.21
SIN3B-209ENST00000596802 PPP1R9BQ96SB3 815 aa28.83■■■□□ 2.21
SIN3B-209ENST00000596802 RARSP54136 660 aaKnown RBP28.83■■■□□ 2.21
SIN3B-209ENST00000596802 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
SIN3B-209ENST00000596802 NPC1L1Q9UHC9 1359 aa28.82■■■□□ 2.2
SIN3B-209ENST00000596802 WWC1Q8IX03 1113 aa28.82■■■□□ 2.2
SIN3B-209ENST00000596802 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
SIN3B-209ENST00000596802 TERF1P54274 439 aa28.8■■■□□ 2.2
SIN3B-209ENST00000596802 PLEKHG5O94827 1062 aa28.79■■■□□ 2.2
SIN3B-209ENST00000596802 RBM10P98175 930 aaKnown RBP28.79■■■□□ 2.2
SIN3B-209ENST00000596802 SKOR2Q2VWA4 1001 aaPredicted RBP28.79■■■□□ 2.2
SIN3B-209ENST00000596802 GBP4Q96PP9 640 aa28.78■■■□□ 2.2
SIN3B-209ENST00000596802 PLB1Q6P1J6 1458 aa28.78■■■□□ 2.2
SIN3B-209ENST00000596802 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.78■■■□□ 2.2
SIN3B-209ENST00000596802 SCAPERQ9BY12 1400 aa28.77■■■□□ 2.2
SIN3B-209ENST00000596802 SMC5Q8IY18 1101 aa28.76■■■□□ 2.2
SIN3B-209ENST00000596802 CIZ1Q9ULV3 898 aaPredicted RBP28.76■■■□□ 2.2
SIN3B-209ENST00000596802 RAB3GAP1Q15042 981 aa28.76■■■□□ 2.19
SIN3B-209ENST00000596802 NASPP49321 788 aaPredicted RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms