RNA–Protein interactions for RNA: ENST00000596360.1

CRLF1-204, Transcript of cytokine receptor like factor 1, humanhuman

TSL 2

Gene CRLF1, Length 413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-204ENST00000596360 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
CRLF1-204ENST00000596360 FOXD1Q16676 465 aa23.79■■□□□ 1.4
CRLF1-204ENST00000596360 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.78■■□□□ 1.4
CRLF1-204ENST00000596360 KIF1BO60333 1816 aa23.76■■□□□ 1.39
CRLF1-204ENST00000596360 PPP1R15AO75807 674 aaPredicted RBP23.73■■□□□ 1.39
CRLF1-204ENST00000596360 PLEKHG1Q9ULL1 1385 aa23.73■■□□□ 1.39
CRLF1-204ENST00000596360 CCDC144AA2RUR9 1427 aa23.7■■□□□ 1.38
CRLF1-204ENST00000596360 ZNF326Q5BKZ1 582 aaKnown RBP23.7■■□□□ 1.38
CRLF1-204ENST00000596360 CPS1P31327 1500 aa23.69■■□□□ 1.38
CRLF1-204ENST00000596360 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
CRLF1-204ENST00000596360 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
CRLF1-204ENST00000596360 FBXO41Q8TF61 875 aa23.67■■□□□ 1.38
CRLF1-204ENST00000596360 BCANQ96GW7 911 aa23.67■■□□□ 1.38
CRLF1-204ENST00000596360 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
CRLF1-204ENST00000596360 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
CRLF1-204ENST00000596360 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
CRLF1-204ENST00000596360 NEXMIFQ5QGS0 1516 aa23.65■■□□□ 1.38
CRLF1-204ENST00000596360 TBX22Q9Y458 520 aa23.64■■□□□ 1.37
CRLF1-204ENST00000596360 STRCP1A6NGW2 1772 aa23.64■■□□□ 1.37
CRLF1-204ENST00000596360 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
CRLF1-204ENST00000596360 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
CRLF1-204ENST00000596360 SPATA31E1Q6ZUB1 1445 aa23.61■■□□□ 1.37
CRLF1-204ENST00000596360 ILDR1Q86SU0 546 aaPredicted RBP23.61■■□□□ 1.37
CRLF1-204ENST00000596360 KCNA6P17658 529 aa23.6■■□□□ 1.37
CRLF1-204ENST00000596360 DIP2AQ14689 1571 aa23.6■■□□□ 1.37
CRLF1-204ENST00000596360 VGFO15240 615 aaPredicted RBP23.59■■□□□ 1.37
CRLF1-204ENST00000596360 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
CRLF1-204ENST00000596360 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
CRLF1-204ENST00000596360 PPLO60437 1756 aa23.57■■□□□ 1.36
CRLF1-204ENST00000596360 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
CRLF1-204ENST00000596360 PIK3R4Q99570 1358 aa23.56■■□□□ 1.36
CRLF1-204ENST00000596360 NRXN3Q9Y4C0 1643 aa23.56■■□□□ 1.36
CRLF1-204ENST00000596360 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
CRLF1-204ENST00000596360 CHD2O14647 1828 aaKnown RBP23.55■■□□□ 1.36
CRLF1-204ENST00000596360 RGL3Q3MIN7 710 aa23.55■■□□□ 1.36
CRLF1-204ENST00000596360 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
CRLF1-204ENST00000596360 IFT172Q9UG01 1749 aa23.51■■□□□ 1.35
CRLF1-204ENST00000596360 PROSER2Q86WR7 435 aaPredicted RBP23.48■■□□□ 1.35
CRLF1-204ENST00000596360 XIRP1Q702N8 1843 aaKnown RBP23.47■■□□□ 1.35
CRLF1-204ENST00000596360 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
CRLF1-204ENST00000596360 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
CRLF1-204ENST00000596360 PTPRUQ92729 1446 aa23.45■■□□□ 1.34
CRLF1-204ENST00000596360 METP08581 1390 aa23.45■■□□□ 1.34
CRLF1-204ENST00000596360 TMEM94Q12767 1356 aa23.45■■□□□ 1.34
CRLF1-204ENST00000596360 AMOTL2Q9Y2J4 779 aa23.45■■□□□ 1.34
CRLF1-204ENST00000596360 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
CRLF1-204ENST00000596360 TOM1O60784 492 aa23.44■■□□□ 1.34
CRLF1-204ENST00000596360 SETD1AO15047 1707 aaKnown RBP23.44■■□□□ 1.34
CRLF1-204ENST00000596360 MYOM2P54296 1465 aa23.42■■□□□ 1.34
CRLF1-204ENST00000596360 XRN1Q8IZH2 1706 aaKnown RBP23.42■■□□□ 1.34
CRLF1-204ENST00000596360 NCOA3Q9Y6Q9 1424 aa23.41■■□□□ 1.34
CRLF1-204ENST00000596360 PIK3C2GO75747 1445 aa23.4■■□□□ 1.34
CRLF1-204ENST00000596360 NRXN1Q9ULB1 1477 aa23.39■■□□□ 1.34
CRLF1-204ENST00000596360 STAC3Q96MF2 364 aa23.39■■□□□ 1.33
CRLF1-204ENST00000596360 DHX57Q6P158 1386 aaKnown RBP23.39■■□□□ 1.33
CRLF1-204ENST00000596360 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
CRLF1-204ENST00000596360 PRAG1Q86YV5 1406 aa23.34■■□□□ 1.33
CRLF1-204ENST00000596360 DCAF11Q8TEB1 546 aa23.34■■□□□ 1.33
CRLF1-204ENST00000596360 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
CRLF1-204ENST00000596360 MSH6P52701 1360 aa23.34■■□□□ 1.33
CRLF1-204ENST00000596360 PTCH1Q13635 1447 aa23.31■■□□□ 1.32
CRLF1-204ENST00000596360 LAMC1P11047 1609 aa23.3■■□□□ 1.32
CRLF1-204ENST00000596360 PIP4K2BP78356 416 aa23.3■■□□□ 1.32
CRLF1-204ENST00000596360 C19orf44Q9H6X5 657 aa23.3■■□□□ 1.32
CRLF1-204ENST00000596360 KDM2AQ9Y2K7 1162 aa23.3■■□□□ 1.32
CRLF1-204ENST00000596360 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
CRLF1-204ENST00000596360 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
CRLF1-204ENST00000596360 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
CRLF1-204ENST00000596360 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
CRLF1-204ENST00000596360 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.32
CRLF1-204ENST00000596360 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
CRLF1-204ENST00000596360 SIN3AQ96ST3 1273 aa23.27■■□□□ 1.32
CRLF1-204ENST00000596360 ABCC11Q96J66 1382 aa23.27■■□□□ 1.31
CRLF1-204ENST00000596360 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
CRLF1-204ENST00000596360 TECPR2O15040 1411 aa23.26■■□□□ 1.31
CRLF1-204ENST00000596360 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
CRLF1-204ENST00000596360 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.25■■□□□ 1.31
CRLF1-204ENST00000596360 CADPS2Q86UW7 1296 aa23.24■■□□□ 1.31
CRLF1-204ENST00000596360 DCCP43146 1447 aa23.24■■□□□ 1.31
CRLF1-204ENST00000596360 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
CRLF1-204ENST00000596360 KNDC1Q76NI1 1749 aa23.23■■□□□ 1.31
CRLF1-204ENST00000596360 FAM135BQ49AJ0 1406 aa23.23■■□□□ 1.31
CRLF1-204ENST00000596360 ADGRL3Q9HAR2 1447 aa23.23■■□□□ 1.31
CRLF1-204ENST00000596360 ATF3P18847 181 aa23.22■■□□□ 1.31
CRLF1-204ENST00000596360 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
CRLF1-204ENST00000596360 STK26Q9P289 416 aa23.22■■□□□ 1.31
CRLF1-204ENST00000596360 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
CRLF1-204ENST00000596360 SIRT1Q96EB6 747 aa23.21■■□□□ 1.31
CRLF1-204ENST00000596360 L3MBTL2Q969R5 705 aa23.2■■□□□ 1.3
CRLF1-204ENST00000596360 ADGRB1O14514 1584 aa23.19■■□□□ 1.3
CRLF1-204ENST00000596360 NALCNQ8IZF0 1738 aa23.19■■□□□ 1.3
CRLF1-204ENST00000596360 HSPA1LP34931 641 aa23.17■■□□□ 1.3
CRLF1-204ENST00000596360 KIAA1210Q9ULL0 1709 aa23.16■■□□□ 1.3
CRLF1-204ENST00000596360 WAPLQ7Z5K2 1190 aa23.15■■□□□ 1.3
CRLF1-204ENST00000596360 ROBO1Q9Y6N7 1651 aa23.15■■□□□ 1.3
CRLF1-204ENST00000596360 DLC1Q96QB1 1528 aa23.14■■□□□ 1.3
CRLF1-204ENST00000596360 MST1RQ04912 1400 aa23.12■■□□□ 1.29
CRLF1-204ENST00000596360 PLEKHH1Q9ULM0 1364 aa23.12■■□□□ 1.29
CRLF1-204ENST00000596360 CDC42BPGQ6DT37 1551 aa23.09■■□□□ 1.29
CRLF1-204ENST00000596360 PRAM1Q96QH2 718 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms