RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 NEXMIFQ5QGS0 1516 aa32.76■■■□□ 2.84
SNRNP70-204ENST00000595231 TXNDC2Q86VQ3 553 aa32.76■■■□□ 2.84
SNRNP70-204ENST00000595231 ANKLE2Q86XL3 938 aa32.76■■■□□ 2.84
SNRNP70-204ENST00000595231 STRCQ7RTU9 1775 aa32.76■■■□□ 2.83
SNRNP70-204ENST00000595231 RPGRIP1LQ68CZ1 1315 aa32.76■■■□□ 2.83
SNRNP70-204ENST00000595231 NCKAP5LQ9HCH0 1330 aa32.75■■■□□ 2.83
SNRNP70-204ENST00000595231 NUTM2DQ5VT03 806 aaPredicted RBP32.73■■■□□ 2.83
SNRNP70-204ENST00000595231 EID1Q9Y6B2 187 aa32.73■■■□□ 2.83
SNRNP70-204ENST00000595231 SCAF11Q99590 1463 aaKnown RBP32.72■■■□□ 2.83
SNRNP70-204ENST00000595231 HDGFP51858 240 aaKnown RBP32.72■■■□□ 2.83
SNRNP70-204ENST00000595231 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.71■■■□□ 2.83
SNRNP70-204ENST00000595231 PPLO60437 1756 aa32.71■■■□□ 2.83
SNRNP70-204ENST00000595231 POLR1AO95602 1720 aaPredicted RBP32.71■■■□□ 2.83
SNRNP70-204ENST00000595231 IFT172Q9UG01 1749 aa32.69■■■□□ 2.82
SNRNP70-204ENST00000595231 MED14O60244 1454 aa32.67■■■□□ 2.82
SNRNP70-204ENST00000595231 VGFO15240 615 aaPredicted RBP32.65■■■□□ 2.82
SNRNP70-204ENST00000595231 PPP1R15AO75807 674 aaPredicted RBP32.64■■■□□ 2.82
SNRNP70-204ENST00000595231 DCAF11Q8TEB1 546 aa32.64■■■□□ 2.82
SNRNP70-204ENST00000595231 L3MBTL2Q969R5 705 aa32.64■■■□□ 2.82
SNRNP70-204ENST00000595231 PLEKHG1Q9ULL1 1385 aa32.62■■■□□ 2.81
SNRNP70-204ENST00000595231 NPHP4O75161 1426 aaPredicted RBP32.61■■■□□ 2.81
SNRNP70-204ENST00000595231 ADGRF5Q8IZF2 1346 aa32.61■■■□□ 2.81
SNRNP70-204ENST00000595231 KDM2AQ9Y2K7 1162 aa32.59■■■□□ 2.81
SNRNP70-204ENST00000595231 MYOM2P54296 1465 aa32.58■■■□□ 2.81
SNRNP70-204ENST00000595231 SENP3Q9H4L4 574 aaPredicted RBP32.58■■■□□ 2.81
SNRNP70-204ENST00000595231 STAC3Q96MF2 364 aa32.57■■■□□ 2.8
SNRNP70-204ENST00000595231 IQGAP1P46940 1657 aa32.57■■■□□ 2.8
SNRNP70-204ENST00000595231 TONSLQ96HA7 1378 aa32.57■■■□□ 2.8
SNRNP70-204ENST00000595231 NRXN1Q9ULB1 1477 aa32.55■■■□□ 2.8
SNRNP70-204ENST00000595231 DMRT2Q9Y5R5 561 aa32.54■■■□□ 2.8
SNRNP70-204ENST00000595231 NRXN3Q9Y4C0 1643 aa32.53■■■□□ 2.8
SNRNP70-204ENST00000595231 SETBP1Q9Y6X0 1596 aa32.52■■■□□ 2.8
SNRNP70-204ENST00000595231 ADAMTS13Q76LX8 1427 aa32.51■■■□□ 2.8
SNRNP70-204ENST00000595231 BCANQ96GW7 911 aa32.51■■■□□ 2.79
SNRNP70-204ENST00000595231 PIK3C2GO75747 1445 aa32.51■■■□□ 2.79
SNRNP70-204ENST00000595231 SLC26A8Q96RN1 970 aa32.5■■■□□ 2.79
SNRNP70-204ENST00000595231 TIMELESSQ9UNS1 1208 aa32.5■■■□□ 2.79
SNRNP70-204ENST00000595231 TBX22Q9Y458 520 aa32.46■■■□□ 2.79
SNRNP70-204ENST00000595231 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
SNRNP70-204ENST00000595231 PRAG1Q86YV5 1406 aa32.43■■■□□ 2.78
SNRNP70-204ENST00000595231 C14orf93Q9H972 538 aaKnown RBP32.42■■■□□ 2.78
SNRNP70-204ENST00000595231 SETD1AO15047 1707 aaKnown RBP32.41■■■□□ 2.78
SNRNP70-204ENST00000595231 DIP2AQ14689 1571 aa32.41■■■□□ 2.78
SNRNP70-204ENST00000595231 CFAP70Q5T0N1 1121 aa32.4■■■□□ 2.78
SNRNP70-204ENST00000595231 NBPF8Q3BBV2 869 aa32.38■■■□□ 2.77
SNRNP70-204ENST00000595231 METP08581 1390 aa32.38■■■□□ 2.77
SNRNP70-204ENST00000595231 LAMC1P11047 1609 aa32.33■■■□□ 2.77
SNRNP70-204ENST00000595231 PIK3R4Q99570 1358 aa32.32■■■□□ 2.76
SNRNP70-204ENST00000595231 KIAA1210Q9ULL0 1709 aa32.31■■■□□ 2.76
SNRNP70-204ENST00000595231 TMEM132EQ6IEE7 984 aa32.31■■■□□ 2.76
SNRNP70-204ENST00000595231 ASXL1Q8IXJ9 1541 aa32.3■■■□□ 2.76
SNRNP70-204ENST00000595231 ZNF335Q9H4Z2 1342 aaPredicted RBP32.3■■■□□ 2.76
SNRNP70-204ENST00000595231 PTPRUQ92729 1446 aa32.3■■■□□ 2.76
SNRNP70-204ENST00000595231 CHD2O14647 1828 aaKnown RBP32.3■■■□□ 2.76
SNRNP70-204ENST00000595231 TRPM1Q7Z4N2 1603 aa32.28■■■□□ 2.76
SNRNP70-204ENST00000595231 NBPF1Q3BBV0 1214 aa32.27■■■□□ 2.76
SNRNP70-204ENST00000595231 ADGRB1O14514 1584 aa32.27■■■□□ 2.76
SNRNP70-204ENST00000595231 KCNA6P17658 529 aa32.27■■■□□ 2.76
SNRNP70-204ENST00000595231 STRCP1A6NGW2 1772 aa32.27■■■□□ 2.76
SNRNP70-204ENST00000595231 AMOTL2Q9Y2J4 779 aa32.24■■■□□ 2.75
SNRNP70-204ENST00000595231 NWD1Q149M9 1564 aa32.23■■■□□ 2.75
SNRNP70-204ENST00000595231 YTHDC2Q9H6S0 1430 aaKnown RBP32.2■■■□□ 2.75
SNRNP70-204ENST00000595231 XRN1Q8IZH2 1706 aaKnown RBP32.2■■■□□ 2.75
SNRNP70-204ENST00000595231 LTBP4Q8N2S1 1624 aa32.19■■■□□ 2.74
SNRNP70-204ENST00000595231 RALGAPBQ86X10 1494 aa32.19■■■□□ 2.74
SNRNP70-204ENST00000595231 LRPPRCP42704 1394 aaKnown RBP32.19■■■□□ 2.74
SNRNP70-204ENST00000595231 STK26Q9P289 416 aa32.17■■■□□ 2.74
SNRNP70-204ENST00000595231 ABCC11Q96J66 1382 aa32.16■■■□□ 2.74
SNRNP70-204ENST00000595231 ROCK2O75116 1388 aaKnown RBP32.16■■■□□ 2.74
SNRNP70-204ENST00000595231 GPRASP1Q5JY77 1395 aa32.15■■■□□ 2.74
SNRNP70-204ENST00000595231 TECPR2O15040 1411 aa32.14■■■□□ 2.74
SNRNP70-204ENST00000595231 NKTRP30414 1462 aaKnown RBP32.14■■■□□ 2.73
SNRNP70-204ENST00000595231 ROBO2Q9HCK4 1378 aa32.12■■■□□ 2.73
SNRNP70-204ENST00000595231 CPS1P31327 1500 aa32.11■■■□□ 2.73
SNRNP70-204ENST00000595231 KNDC1Q76NI1 1749 aa32.11■■■□□ 2.73
SNRNP70-204ENST00000595231 TRAK1Q9UPV9 953 aa32.1■■■□□ 2.73
SNRNP70-204ENST00000595231 PTCH1Q13635 1447 aa32.09■■■□□ 2.73
SNRNP70-204ENST00000595231 LRRC7Q96NW7 1537 aa32.09■■■□□ 2.73
SNRNP70-204ENST00000595231 PROSER2Q86WR7 435 aaPredicted RBP32.08■■■□□ 2.73
SNRNP70-204ENST00000595231 CARD11Q9BXL7 1154 aa32.08■■■□□ 2.73
SNRNP70-204ENST00000595231 SIRT1Q96EB6 747 aa32.06■■■□□ 2.72
SNRNP70-204ENST00000595231 RBM33Q96EV2 1170 aaKnown RBP32.06■■■□□ 2.72
SNRNP70-204ENST00000595231 DLC1Q96QB1 1528 aa32.06■■■□□ 2.72
SNRNP70-204ENST00000595231 WAPLQ7Z5K2 1190 aa32.04■■■□□ 2.72
SNRNP70-204ENST00000595231 TMEM94Q12767 1356 aa32.03■■■□□ 2.72
SNRNP70-204ENST00000595231 FAM135BQ49AJ0 1406 aa32.03■■■□□ 2.72
SNRNP70-204ENST00000595231 XIRP1Q702N8 1843 aaKnown RBP32.02■■■□□ 2.72
SNRNP70-204ENST00000595231 ARHGEF28Q8N1W1 1705 aaKnown RBP32.02■■■□□ 2.72
SNRNP70-204ENST00000595231 PLEKHH1Q9ULM0 1364 aa32.02■■■□□ 2.72
SNRNP70-204ENST00000595231 PRAM1Q96QH2 718 aa32.01■■■□□ 2.71
SNRNP70-204ENST00000595231 ZEB1P37275 1124 aaPredicted RBP31.98■■■□□ 2.71
SNRNP70-204ENST00000595231 NCOA3Q9Y6Q9 1424 aa31.97■■■□□ 2.71
SNRNP70-204ENST00000595231 POGKQ9P215 609 aa31.95■■■□□ 2.7
SNRNP70-204ENST00000595231 SAFB2Q14151 953 aaKnown RBP eCLIP31.93■■■□□ 2.7
SNRNP70-204ENST00000595231 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.93■■■□□ 2.7
SNRNP70-204ENST00000595231 CERKQ8TCT0 537 aa31.92■■■□□ 2.7
SNRNP70-204ENST00000595231 CENPJQ9HC77 1338 aaPredicted RBP31.89■■■□□ 2.7
SNRNP70-204ENST00000595231 EIF3AQ14152 1382 aaKnown RBP31.89■■■□□ 2.7
SNRNP70-204ENST00000595231 USP47Q96K76 1375 aa31.89■■■□□ 2.7
SNRNP70-204ENST00000595231 NALCNQ8IZF0 1738 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms