RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 RICTORQ6R327 1708 aa23.06■■□□□ 1.28
SHKBP1-205ENST00000594973 CFAP70Q5T0N1 1121 aa23.05■■□□□ 1.28
SHKBP1-205ENST00000594973 ABCC3O15438 1527 aa23.05■■□□□ 1.28
SHKBP1-205ENST00000594973 KIF1BO60333 1816 aa23.04■■□□□ 1.28
SHKBP1-205ENST00000594973 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
SHKBP1-205ENST00000594973 SCAF11Q99590 1463 aaKnown RBP23.03■■□□□ 1.28
SHKBP1-205ENST00000594973 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
SHKBP1-205ENST00000594973 TMC1Q8TDI8 760 aa23.02■■□□□ 1.28
SHKBP1-205ENST00000594973 DIP2BQ9P265 1576 aa23.02■■□□□ 1.28
SHKBP1-205ENST00000594973 MROH2AA6NES4 1674 aa23.01■■□□□ 1.27
SHKBP1-205ENST00000594973 PANK3Q9H999 370 aa23.01■■□□□ 1.27
SHKBP1-205ENST00000594973 IQGAP1P46940 1657 aa23■■□□□ 1.27
SHKBP1-205ENST00000594973 RALBP1Q15311 655 aa23■■□□□ 1.27
SHKBP1-205ENST00000594973 MYOM2P54296 1465 aa23■■□□□ 1.27
SHKBP1-205ENST00000594973 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
SHKBP1-205ENST00000594973 NOS1P29475 1434 aa22.98■■□□□ 1.27
SHKBP1-205ENST00000594973 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
SHKBP1-205ENST00000594973 MYBBP1AQ9BQG0 1328 aaKnown RBP22.98■■□□□ 1.27
SHKBP1-205ENST00000594973 ADGRB3O60242 1522 aa22.97■■□□□ 1.27
SHKBP1-205ENST00000594973 KTN1Q86UP2 1357 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-205ENST00000594973 CAMSAP1Q5T5Y3 1602 aa22.96■■□□□ 1.27
SHKBP1-205ENST00000594973 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-205ENST00000594973 EIF3AQ14152 1382 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-205ENST00000594973 ZBED9Q6R2W3 1325 aa22.95■■□□□ 1.27
SHKBP1-205ENST00000594973 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
SHKBP1-205ENST00000594973 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
SHKBP1-205ENST00000594973 IFT172Q9UG01 1749 aa22.93■■□□□ 1.26
SHKBP1-205ENST00000594973 NUTM2DQ5VT03 806 aaPredicted RBP22.92■■□□□ 1.26
SHKBP1-205ENST00000594973 KIAA1210Q9ULL0 1709 aa22.92■■□□□ 1.26
SHKBP1-205ENST00000594973 SIGLEC1Q9BZZ2 1709 aa22.92■■□□□ 1.26
SHKBP1-205ENST00000594973 PARD3Q8TEW0 1356 aa22.91■■□□□ 1.26
SHKBP1-205ENST00000594973 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
SHKBP1-205ENST00000594973 CDCA8Q53HL2 280 aa22.91■■□□□ 1.26
SHKBP1-205ENST00000594973 NRXN1Q9ULB1 1477 aa22.91■■□□□ 1.26
SHKBP1-205ENST00000594973 NLRP13Q86W25 1043 aa22.88■■□□□ 1.25
SHKBP1-205ENST00000594973 SYNMO15061 1565 aa22.88■■□□□ 1.25
SHKBP1-205ENST00000594973 ZMYM4Q5VZL5 1548 aa22.87■■□□□ 1.25
SHKBP1-205ENST00000594973 IDI1Q13907 227 aa22.87■■□□□ 1.25
SHKBP1-205ENST00000594973 ARHGAP31Q2M1Z3 1444 aa22.86■■□□□ 1.25
SHKBP1-205ENST00000594973 RPGRIP1LQ68CZ1 1315 aa22.86■■□□□ 1.25
SHKBP1-205ENST00000594973 PIK3C2GO75747 1445 aa22.86■■□□□ 1.25
SHKBP1-205ENST00000594973 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
SHKBP1-205ENST00000594973 TRAK1Q9UPV9 953 aa22.85■■□□□ 1.25
SHKBP1-205ENST00000594973 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
SHKBP1-205ENST00000594973 KNSTRNQ9Y448 316 aa22.85■■□□□ 1.25
SHKBP1-205ENST00000594973 C14orf93Q9H972 538 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-205ENST00000594973 PPP4R2Q9NY27 417 aa22.84■■□□□ 1.25
SHKBP1-205ENST00000594973 PPLO60437 1756 aa22.84■■□□□ 1.25
SHKBP1-205ENST00000594973 ZC3H13Q5T200 1668 aaKnown RBP22.84■■□□□ 1.25
SHKBP1-205ENST00000594973 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.25
SHKBP1-205ENST00000594973 FBXO31Q5XUX0 539 aaPredicted RBP22.82■■□□□ 1.24
SHKBP1-205ENST00000594973 ANO8Q9HCE9 1232 aaPredicted RBP22.82■■□□□ 1.24
SHKBP1-205ENST00000594973 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
SHKBP1-205ENST00000594973 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
SHKBP1-205ENST00000594973 NOP58Q9Y2X3 529 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-205ENST00000594973 LRPPRCP42704 1394 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-205ENST00000594973 VGFO15240 615 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-205ENST00000594973 MLECQ14165 292 aa22.8■■□□□ 1.24
SHKBP1-205ENST00000594973 CENPJQ9HC77 1338 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-205ENST00000594973 ERVK-7P63135 1459 aa22.79■■□□□ 1.24
SHKBP1-205ENST00000594973 SLC24A1O60721 1099 aa22.78■■□□□ 1.24
SHKBP1-205ENST00000594973 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.24
SHKBP1-205ENST00000594973 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
SHKBP1-205ENST00000594973 AMER1Q5JTC6 1135 aaPredicted RBP22.76■■□□□ 1.23
SHKBP1-205ENST00000594973 KDM5AP29375 1690 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-205ENST00000594973 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
SHKBP1-205ENST00000594973 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
SHKBP1-205ENST00000594973 MYOM1P52179 1685 aa22.74■■□□□ 1.23
SHKBP1-205ENST00000594973 SALL2Q9Y467 1007 aaPredicted RBP22.73■■□□□ 1.23
SHKBP1-205ENST00000594973 KIF13AQ9H1H9 1805 aa22.72■■□□□ 1.23
SHKBP1-205ENST00000594973 SBNO2Q9Y2G9 1366 aa22.71■■□□□ 1.23
SHKBP1-205ENST00000594973 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
SHKBP1-205ENST00000594973 MYO3AQ8NEV4 1616 aa22.71■■□□□ 1.23
SHKBP1-205ENST00000594973 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.22
SHKBP1-205ENST00000594973 SMG6Q86US8 1419 aaKnown RBP22.69■■□□□ 1.22
SHKBP1-205ENST00000594973 PPP2R1AP30153 589 aa22.69■■□□□ 1.22
SHKBP1-205ENST00000594973 AGLP35573 1532 aa22.69■■□□□ 1.22
SHKBP1-205ENST00000594973 REREQ9P2R6 1566 aa22.69■■□□□ 1.22
SHKBP1-205ENST00000594973 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
SHKBP1-205ENST00000594973 MYO5BQ9ULV0 1848 aa22.67■■□□□ 1.22
SHKBP1-205ENST00000594973 CARD14Q9BXL6 1004 aa22.67■■□□□ 1.22
SHKBP1-205ENST00000594973 STK26Q9P289 416 aa22.67■■□□□ 1.22
SHKBP1-205ENST00000594973 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
SHKBP1-205ENST00000594973 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
SHKBP1-205ENST00000594973 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHKBP1-205ENST00000594973 CLTCQ00610 1675 aaKnown RBP22.65■■□□□ 1.22
SHKBP1-205ENST00000594973 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
SHKBP1-205ENST00000594973 ZFYVE9O95405 1425 aa22.63■■□□□ 1.21
SHKBP1-205ENST00000594973 NBR1Q14596 966 aa22.63■■□□□ 1.21
SHKBP1-205ENST00000594973 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
SHKBP1-205ENST00000594973 ARHGEF40Q8TER5 1519 aa22.63■■□□□ 1.21
SHKBP1-205ENST00000594973 ESF1Q9H501 851 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-205ENST00000594973 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
SHKBP1-205ENST00000594973 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-205ENST00000594973 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
SHKBP1-205ENST00000594973 PAK3O75914 559 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-205ENST00000594973 WDR43Q15061 677 aaKnown RBP eCLIP22.58■■□□□ 1.21
SHKBP1-205ENST00000594973 EVC2Q86UK5 1308 aa22.58■■□□□ 1.21
SHKBP1-205ENST00000594973 ARHGEF28Q8N1W1 1705 aaKnown RBP22.57■■□□□ 1.2
SHKBP1-205ENST00000594973 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms