RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 RAPGEF4Q8WZA2 1011 aa22.52■■□□□ 1.2
SYNM-204ENST00000594047 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
SYNM-204ENST00000594047 NFXL1Q6ZNB6 911 aa22.52■■□□□ 1.2
SYNM-204ENST00000594047 PCMTD1Q96MG8 357 aaPredicted RBP22.52■■□□□ 1.2
SYNM-204ENST00000594047 CHMP4AQ9BY43 222 aa22.51■■□□□ 1.19
SYNM-204ENST00000594047 TMEM132EQ6IEE7 984 aa22.5■■□□□ 1.19
SYNM-204ENST00000594047 CABP2Q9NPB3 220 aa22.5■■□□□ 1.19
SYNM-204ENST00000594047 IBSPP21815 317 aaPredicted RBP22.5■■□□□ 1.19
SYNM-204ENST00000594047 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
SYNM-204ENST00000594047 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
SYNM-204ENST00000594047 PTPRGP23470 1445 aa22.49■■□□□ 1.19
SYNM-204ENST00000594047 FKBP5Q13451 457 aaPredicted RBP22.49■■□□□ 1.19
SYNM-204ENST00000594047 RIC3Q7Z5B4 369 aa22.49■■□□□ 1.19
SYNM-204ENST00000594047 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
SYNM-204ENST00000594047 ANO2Q9NQ90 1003 aa22.49■■□□□ 1.19
SYNM-204ENST00000594047 CCDC34Q96HJ3 373 aa22.48■■□□□ 1.19
SYNM-204ENST00000594047 DIAPH3Q9NSV4 1193 aa22.48■■□□□ 1.19
SYNM-204ENST00000594047 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
SYNM-204ENST00000594047 CCAR2Q8N163 923 aaKnown RBP22.48■■□□□ 1.19
SYNM-204ENST00000594047 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
SYNM-204ENST00000594047 CCAR1Q8IX12 1150 aaKnown RBP22.46■■□□□ 1.19
SYNM-204ENST00000594047 BCL11BQ9C0K0 894 aaPredicted RBP22.46■■□□□ 1.19
SYNM-204ENST00000594047 TSPYL4Q9UJ04 414 aa22.46■■□□□ 1.19
SYNM-204ENST00000594047 XPCQ01831 940 aaPredicted RBP22.46■■□□□ 1.19
SYNM-204ENST00000594047 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.19
SYNM-204ENST00000594047 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
SYNM-204ENST00000594047 RIPK4P57078 832 aa22.45■■□□□ 1.18
SYNM-204ENST00000594047 CHMP4CQ96CF2 233 aa22.45■■□□□ 1.18
SYNM-204ENST00000594047 DDX54Q8TDD1 881 aaKnown RBP22.45■■□□□ 1.18
SYNM-204ENST00000594047 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
SYNM-204ENST00000594047 PROSER2Q86WR7 435 aaPredicted RBP22.44■■□□□ 1.18
SYNM-204ENST00000594047 COG6Q9Y2V7 657 aa22.44■■□□□ 1.18
SYNM-204ENST00000594047 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
SYNM-204ENST00000594047 PATL2C9JE40 543 aaKnown RBP22.43■■□□□ 1.18
SYNM-204ENST00000594047 SYAP1Q96A49 352 aaPredicted RBP22.42■■□□□ 1.18
SYNM-204ENST00000594047 DIAPH1O60610 1272 aaKnown RBP22.42■■□□□ 1.18
SYNM-204ENST00000594047 NLRP6P59044 892 aa22.42■■□□□ 1.18
SYNM-204ENST00000594047 ABTB2Q8N961 1025 aa22.42■■□□□ 1.18
SYNM-204ENST00000594047 TPM3P06753 285 aa22.42■■□□□ 1.18
SYNM-204ENST00000594047 WASHC4Q2M389 1173 aa22.42■■□□□ 1.18
SYNM-204ENST00000594047 ST18O60284 1047 aa22.4■■□□□ 1.18
SYNM-204ENST00000594047 TRIM29Q14134 588 aa22.4■■□□□ 1.18
SYNM-204ENST00000594047 ATP2B2Q01814 1243 aa22.4■■□□□ 1.18
SYNM-204ENST00000594047 APAF1O14727 1248 aa22.4■■□□□ 1.18
SYNM-204ENST00000594047 G3BP1Q13283 466 aaKnown RBP eCLIP22.39■■□□□ 1.18
SYNM-204ENST00000594047 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.18
SYNM-204ENST00000594047 DEKP35659 375 aaKnown RBP22.39■■□□□ 1.17
SYNM-204ENST00000594047 TMEM132AQ24JP5 1023 aa22.39■■□□□ 1.17
SYNM-204ENST00000594047 WIZO95785 1651 aa22.38■■□□□ 1.17
SYNM-204ENST00000594047 DDX58O95786 925 aaKnown RBP22.37■■□□□ 1.17
SYNM-204ENST00000594047 CPLX1O14810 134 aa22.37■■□□□ 1.17
SYNM-204ENST00000594047 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
SYNM-204ENST00000594047 BICDL1Q6ZP65 573 aa22.36■■□□□ 1.17
SYNM-204ENST00000594047 RBM19Q9Y4C8 960 aaKnown RBP22.36■■□□□ 1.17
SYNM-204ENST00000594047 ERICH2A1L162 156 aa22.36■■□□□ 1.17
SYNM-204ENST00000594047 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
SYNM-204ENST00000594047 RBM5P52756 815 aaKnown RBP eCLIP22.35■■□□□ 1.17
SYNM-204ENST00000594047 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
SYNM-204ENST00000594047 CSPP1Q1MSJ5 1256 aa22.33■■□□□ 1.17
SYNM-204ENST00000594047 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
SYNM-204ENST00000594047 TRDNQ13061 729 aa22.33■■□□□ 1.17
SYNM-204ENST00000594047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.33■■□□□ 1.173e-10■■■■■ 153.8
SYNM-204ENST00000594047 TSR1Q2NL82 804 aaKnown RBP22.33■■□□□ 1.17
SYNM-204ENST00000594047 CRBNQ96SW2 442 aa22.32■■□□□ 1.16
SYNM-204ENST00000594047 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
SYNM-204ENST00000594047 TPM2P07951 284 aa22.32■■□□□ 1.16
SYNM-204ENST00000594047 ZKSCAN2Q63HK3 967 aa22.31■■□□□ 1.16
SYNM-204ENST00000594047 TOM1L2Q6ZVM7 507 aa22.31■■□□□ 1.16
SYNM-204ENST00000594047 FAM161AQ3B820 660 aa22.31■■□□□ 1.16
SYNM-204ENST00000594047 SPINK5Q9NQ38 1064 aaPredicted RBP22.31■■□□□ 1.16
SYNM-204ENST00000594047 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
SYNM-204ENST00000594047 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.3■■□□□ 1.16
SYNM-204ENST00000594047 RRP12Q5JTH9 1297 aaKnown RBP22.3■■□□□ 1.16
SYNM-204ENST00000594047 KIF3AQ9Y496 699 aa22.3■■□□□ 1.16
SYNM-204ENST00000594047 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
SYNM-204ENST00000594047 RSPH4AQ5TD94 716 aa22.29■■□□□ 1.16
SYNM-204ENST00000594047 GOLGA6L1Q8N7Z2 621 aa22.29■■□□□ 1.16
SYNM-204ENST00000594047 ZNF592Q92610 1267 aa22.28■■□□□ 1.16
SYNM-204ENST00000594047 KIF6Q6ZMV9 814 aa22.28■■□□□ 1.16
SYNM-204ENST00000594047 PAXIP1Q6ZW49 1069 aaPredicted RBP22.27■■□□□ 1.16
SYNM-204ENST00000594047 KIF15Q9NS87 1388 aa22.27■■□□□ 1.16
SYNM-204ENST00000594047 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
SYNM-204ENST00000594047 ZFYVE27Q5T4F4 411 aa22.27■■□□□ 1.15
SYNM-204ENST00000594047 GOLGA6L3A6NEY3 463 aa22.26■■□□□ 1.15
SYNM-204ENST00000594047 MYBBP1AQ9BQG0 1328 aaKnown RBP22.26■■□□□ 1.15
SYNM-204ENST00000594047 BECN2A8MW95 431 aa22.26■■□□□ 1.15
SYNM-204ENST00000594047 EXOC6Q8TAG9 804 aa22.26■■□□□ 1.15
SYNM-204ENST00000594047 GOLGA6L19H0YKK7 550 aa22.26■■□□□ 1.15
SYNM-204ENST00000594047 CHMP4BP1P59074 171 aa22.26■■□□□ 1.15
SYNM-204ENST00000594047 ATP2B1P20020 1258 aa22.26■■□□□ 1.15
SYNM-204ENST00000594047 VPS37CA5D8V6 355 aaPredicted RBP22.25■■□□□ 1.15
SYNM-204ENST00000594047 PAF1Q8N7H5 531 aa22.25■■□□□ 1.15
SYNM-204ENST00000594047 MYL6BP14649 208 aa22.25■■□□□ 1.15
SYNM-204ENST00000594047 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
SYNM-204ENST00000594047 NAP1L1P55209 391 aaKnown RBP22.24■■□□□ 1.15
SYNM-204ENST00000594047 ZNF219Q9P2Y4 722 aaPredicted RBP22.24■■□□□ 1.15
SYNM-204ENST00000594047 LRRFIP1Q32MZ4 808 aaKnown RBP22.24■■□□□ 1.15
SYNM-204ENST00000594047 CPLX2Q6PUV4 134 aaKnown RBP22.23■■□□□ 1.15
SYNM-204ENST00000594047 R3HCC1Q9Y3T6 440 aaKnown RBP22.23■■□□□ 1.15
SYNM-204ENST00000594047 MYCNP04198 464 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms