RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
SMAD4-214ENST00000592186 L3MBTL2Q969R5 705 aa15.35■□□□□ 0.05
SMAD4-214ENST00000592186 TMEM2Q9UHN6 1383 aa15.35■□□□□ 0.05
SMAD4-214ENST00000592186 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
SMAD4-214ENST00000592186 KIF1BO60333 1816 aa15.34■□□□□ 0.05
SMAD4-214ENST00000592186 DCAF11Q8TEB1 546 aa15.34■□□□□ 0.05
SMAD4-214ENST00000592186 ANKLE2Q86XL3 938 aa15.33■□□□□ 0.04
SMAD4-214ENST00000592186 TXNDC2Q86VQ3 553 aa15.32■□□□□ 0.04
SMAD4-214ENST00000592186 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
SMAD4-214ENST00000592186 ZFYVE9O95405 1425 aa15.31■□□□□ 0.04
SMAD4-214ENST00000592186 UBR1Q8IWV7 1749 aa15.31■□□□□ 0.04
SMAD4-214ENST00000592186 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
SMAD4-214ENST00000592186 KDM2AQ9Y2K7 1162 aa15.3■□□□□ 0.04
SMAD4-214ENST00000592186 RIMS2Q9UQ26 1411 aa15.3■□□□□ 0.04
SMAD4-214ENST00000592186 SLIT1O75093 1534 aa15.29■□□□□ 0.04
SMAD4-214ENST00000592186 ARHGAP23Q9P227 1491 aa15.29■□□□□ 0.04
SMAD4-214ENST00000592186 LMTK3Q96Q04 1460 aa15.28■□□□□ 0.04
SMAD4-214ENST00000592186 LTKP29376 864 aa15.27■□□□□ 0.04
SMAD4-214ENST00000592186 HSPA2P54652 639 aa15.25■□□□□ 0.03
SMAD4-214ENST00000592186 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
SMAD4-214ENST00000592186 MYOM2P54296 1465 aa15.25■□□□□ 0.03
SMAD4-214ENST00000592186 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
SMAD4-214ENST00000592186 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
SMAD4-214ENST00000592186 BCANQ96GW7 911 aa15.24■□□□□ 0.03
SMAD4-214ENST00000592186 ADGRF5Q8IZF2 1346 aa15.24■□□□□ 0.03
SMAD4-214ENST00000592186 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
SMAD4-214ENST00000592186 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
SMAD4-214ENST00000592186 C14orf93Q9H972 538 aaKnown RBP15.22■□□□□ 0.03
SMAD4-214ENST00000592186 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
SMAD4-214ENST00000592186 NRXN1Q9ULB1 1477 aa15.21■□□□□ 0.03
SMAD4-214ENST00000592186 MYO5BQ9ULV0 1848 aa15.21■□□□□ 0.02
SMAD4-214ENST00000592186 TBX22Q9Y458 520 aa15.2■□□□□ 0.02
SMAD4-214ENST00000592186 PPLO60437 1756 aa15.2■□□□□ 0.02
SMAD4-214ENST00000592186 MED14O60244 1454 aa15.2■□□□□ 0.02
SMAD4-214ENST00000592186 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
SMAD4-214ENST00000592186 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
SMAD4-214ENST00000592186 NPHP4O75161 1426 aaPredicted RBP15.18■□□□□ 0.02
SMAD4-214ENST00000592186 IFT172Q9UG01 1749 aa15.18■□□□□ 0.02
SMAD4-214ENST00000592186 NBPF8Q3BBV2 869 aa15.17■□□□□ 0.02
SMAD4-214ENST00000592186 CFAP70Q5T0N1 1121 aa15.17■□□□□ 0.02
SMAD4-214ENST00000592186 SLC26A8Q96RN1 970 aa15.16■□□□□ 0.02
SMAD4-214ENST00000592186 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
SMAD4-214ENST00000592186 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
SMAD4-214ENST00000592186 ADAMTS13Q76LX8 1427 aa15.13■□□□□ 0.01
SMAD4-214ENST00000592186 ROCK2O75116 1388 aaKnown RBP15.12■□□□□ 0.01
SMAD4-214ENST00000592186 ALKQ9UM73 1620 aa15.12■□□□□ 0.01
SMAD4-214ENST00000592186 NBPF1Q3BBV0 1214 aa15.12■□□□□ 0.01
SMAD4-214ENST00000592186 POLR1AO95602 1720 aaPredicted RBP15.11■□□□□ 0.01
SMAD4-214ENST00000592186 DIP2AQ14689 1571 aa15.11■□□□□ 0.01
SMAD4-214ENST00000592186 LAMC1P11047 1609 aa15.11■□□□□ 0.01
SMAD4-214ENST00000592186 CARD11Q9BXL7 1154 aa15.11■□□□□ 0.01
SMAD4-214ENST00000592186 KIAA1210Q9ULL0 1709 aa15.1■□□□□ 0.01
SMAD4-214ENST00000592186 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
SMAD4-214ENST00000592186 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
SMAD4-214ENST00000592186 SIRT1Q96EB6 747 aa15.1■□□□□ 0.01
SMAD4-214ENST00000592186 GPRASP1Q5JY77 1395 aa15.1■□□□□ 0.01
SMAD4-214ENST00000592186 RALGAPBQ86X10 1494 aa15.1■□□□□ 0.01
SMAD4-214ENST00000592186 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
SMAD4-214ENST00000592186 METP08581 1390 aa15.09■□□□□ 0.01
SMAD4-214ENST00000592186 STRCQ7RTU9 1775 aa15.08■□□□□ 0
SMAD4-214ENST00000592186 KCNA6P17658 529 aa15.08■□□□□ 0
SMAD4-214ENST00000592186 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
SMAD4-214ENST00000592186 ABCC11Q96J66 1382 aa15.07■□□□□ 0
SMAD4-214ENST00000592186 NRXN3Q9Y4C0 1643 aa15.07■□□□□ 0
SMAD4-214ENST00000592186 AMOTL2Q9Y2J4 779 aa15.07■□□□□ 0
SMAD4-214ENST00000592186 TRPM1Q7Z4N2 1603 aa15.06■□□□□ 0
SMAD4-214ENST00000592186 SLC24A1O60721 1099 aa15.06■□□□□ 0
SMAD4-214ENST00000592186 STK26Q9P289 416 aa15.06■□□□□ 0
SMAD4-214ENST00000592186 YTHDC2Q9H6S0 1430 aaKnown RBP15.06■□□□□ 0
SMAD4-214ENST00000592186 EIF3AQ14152 1382 aaKnown RBP15.04■□□□□ -0
SMAD4-214ENST00000592186 ADGRB1O14514 1584 aa15.04■□□□□ -0
SMAD4-214ENST00000592186 EIF4G2P78344 907 aaKnown RBP eCLIP15.04■□□□□ -0
SMAD4-214ENST00000592186 TRAK1Q9UPV9 953 aa15.04■□□□□ -0
SMAD4-214ENST00000592186 POGKQ9P215 609 aa15.02■□□□□ -0
SMAD4-214ENST00000592186 TECPR2O15040 1411 aa15.02□□□□□ -0.01
SMAD4-214ENST00000592186 FAM135BQ49AJ0 1406 aa15.01□□□□□ -0.01
SMAD4-214ENST00000592186 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
SMAD4-214ENST00000592186 SETD1AO15047 1707 aaKnown RBP15□□□□□ -0.01
SMAD4-214ENST00000592186 PROSER2Q86WR7 435 aaPredicted RBP14.99□□□□□ -0.01
SMAD4-214ENST00000592186 PRAM1Q96QH2 718 aa14.99□□□□□ -0.01
SMAD4-214ENST00000592186 USP47Q96K76 1375 aa14.99□□□□□ -0.01
SMAD4-214ENST00000592186 ASXL1Q8IXJ9 1541 aa14.99□□□□□ -0.01
SMAD4-214ENST00000592186 DLC1Q96QB1 1528 aa14.99□□□□□ -0.01
SMAD4-214ENST00000592186 CENPJQ9HC77 1338 aaPredicted RBP14.98□□□□□ -0.01
SMAD4-214ENST00000592186 PTCH1Q13635 1447 aa14.98□□□□□ -0.01
SMAD4-214ENST00000592186 ST20-MTHFSA0A0A6YYL1 179 aa14.97□□□□□ -0.01
SMAD4-214ENST00000592186 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
SMAD4-214ENST00000592186 NCOA3Q9Y6Q9 1424 aa14.97□□□□□ -0.01
SMAD4-214ENST00000592186 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
SMAD4-214ENST00000592186 CHD2O14647 1828 aaKnown RBP14.96□□□□□ -0.01
SMAD4-214ENST00000592186 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.01
SMAD4-214ENST00000592186 HSPA5P11021 654 aaKnown RBP14.96□□□□□ -0.01
SMAD4-214ENST00000592186 WAPLQ7Z5K2 1190 aa14.96□□□□□ -0.01
SMAD4-214ENST00000592186 NWD1Q149M9 1564 aa14.95□□□□□ -0.02
SMAD4-214ENST00000592186 CPS1P31327 1500 aa14.94□□□□□ -0.02
SMAD4-214ENST00000592186 SBNO2Q9Y2G9 1366 aa14.94□□□□□ -0.02
SMAD4-214ENST00000592186 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
SMAD4-214ENST00000592186 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMAD4-214ENST00000592186 CDCA8Q53HL2 280 aa14.92□□□□□ -0.02
SMAD4-214ENST00000592186 C14orf37Q86TY3 774 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms