RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 CLCN1P35523 988 aa13.59□□□□□ -0.23
CNTNAP1-204ENST00000591662 TPRNQ4KMQ1 711 aa13.59□□□□□ -0.23
CNTNAP1-204ENST00000591662 HDGFL2Q7Z4V5 671 aaPredicted RBP13.59□□□□□ -0.23
CNTNAP1-204ENST00000591662 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
CNTNAP1-204ENST00000591662 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
CNTNAP1-204ENST00000591662 KIF16BQ96L93 1317 aa13.58□□□□□ -0.24
CNTNAP1-204ENST00000591662 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.24
CNTNAP1-204ENST00000591662 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
CNTNAP1-204ENST00000591662 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
CNTNAP1-204ENST00000591662 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
CNTNAP1-204ENST00000591662 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
CNTNAP1-204ENST00000591662 ROCK1Q13464 1354 aa13.57□□□□□ -0.24
CNTNAP1-204ENST00000591662 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
CNTNAP1-204ENST00000591662 PCF11O94913 1555 aaKnown RBP13.57□□□□□ -0.24
CNTNAP1-204ENST00000591662 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
CNTNAP1-204ENST00000591662 ZMYND15Q9H091 742 aa13.56□□□□□ -0.24
CNTNAP1-204ENST00000591662 ZSCAN30Q86W11 494 aa13.56□□□□□ -0.24
CNTNAP1-204ENST00000591662 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
CNTNAP1-204ENST00000591662 DNAJC5BQ9UF47 199 aa13.56□□□□□ -0.24
CNTNAP1-204ENST00000591662 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
CNTNAP1-204ENST00000591662 ANKRD50Q9ULJ7 1429 aa13.55□□□□□ -0.24
CNTNAP1-204ENST00000591662 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
CNTNAP1-204ENST00000591662 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
CNTNAP1-204ENST00000591662 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
CNTNAP1-204ENST00000591662 PPP2R1AP30153 589 aa13.54□□□□□ -0.24
CNTNAP1-204ENST00000591662 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
CNTNAP1-204ENST00000591662 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
CNTNAP1-204ENST00000591662 HMMRO75330 724 aa13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 ATP6V1DQ9Y5K8 247 aa13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 REC8O95072 547 aa13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
CNTNAP1-204ENST00000591662 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.24
CNTNAP1-204ENST00000591662 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
CNTNAP1-204ENST00000591662 MBD3O95983 291 aa13.52□□□□□ -0.25
CNTNAP1-204ENST00000591662 TNNT3P45378 269 aaPredicted RBP13.52□□□□□ -0.25
CNTNAP1-204ENST00000591662 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
CNTNAP1-204ENST00000591662 MCTP1Q6DN14 999 aa13.51□□□□□ -0.25
CNTNAP1-204ENST00000591662 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
CNTNAP1-204ENST00000591662 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP1-204ENST00000591662 UNC13AQ9UPW8 1703 aa13.51□□□□□ -0.25
CNTNAP1-204ENST00000591662 SLFN5Q08AF3 891 aa13.51□□□□□ -0.25
CNTNAP1-204ENST00000591662 NPHP1O15259 732 aa13.51□□□□□ -0.25
CNTNAP1-204ENST00000591662 PTPRGP23470 1445 aa13.5□□□□□ -0.25
CNTNAP1-204ENST00000591662 BCAR3O75815 825 aa13.49□□□□□ -0.25
CNTNAP1-204ENST00000591662 TPM3P06753 285 aa13.49□□□□□ -0.25
CNTNAP1-204ENST00000591662 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
CNTNAP1-204ENST00000591662 KCNJ4P48050 445 aa13.49□□□□□ -0.25
CNTNAP1-204ENST00000591662 DAPK1P53355 1430 aa13.49□□□□□ -0.25
CNTNAP1-204ENST00000591662 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
CNTNAP1-204ENST00000591662 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP1-204ENST00000591662 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
CNTNAP1-204ENST00000591662 TBC1D2Q9BYX2 928 aa13.48□□□□□ -0.25
CNTNAP1-204ENST00000591662 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 TERF2IPQ9NYB0 399 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 CDC45O75419 566 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 UQCRHLA0A096LP55 91 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 UQCRHP07919 91 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 RABEP1Q15276 862 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 SCAPERQ9BY12 1400 aa13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 CWC22Q9HCG8 908 aaKnown RBP13.47□□□□□ -0.25
CNTNAP1-204ENST00000591662 C8orf34Q49A92 452 aa13.46□□□□□ -0.25
CNTNAP1-204ENST00000591662 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
CNTNAP1-204ENST00000591662 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.25
CNTNAP1-204ENST00000591662 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.26
CNTNAP1-204ENST00000591662 APBB1O00213 710 aa13.46□□□□□ -0.26
CNTNAP1-204ENST00000591662 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.26
CNTNAP1-204ENST00000591662 CYB5RLQ6IPT4 315 aa13.45□□□□□ -0.26
CNTNAP1-204ENST00000591662 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
CNTNAP1-204ENST00000591662 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
CNTNAP1-204ENST00000591662 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
CNTNAP1-204ENST00000591662 FGD1P98174 961 aa13.45□□□□□ -0.26
CNTNAP1-204ENST00000591662 TBC1D32Q96NH3 1257 aa13.44□□□□□ -0.26
CNTNAP1-204ENST00000591662 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
CNTNAP1-204ENST00000591662 WDR63Q8IWG1 891 aa13.44□□□□□ -0.26
CNTNAP1-204ENST00000591662 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
CNTNAP1-204ENST00000591662 LETM1O95202 739 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 MCM5P33992 734 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 CCDC66A2RUB6 948 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 CSB-PGBD3P0DP91 1061 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 MVPQ14764 893 aaKnown RBP13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 GCC1Q96CN9 775 aa13.43□□□□□ -0.26
CNTNAP1-204ENST00000591662 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
CNTNAP1-204ENST00000591662 API5Q9BZZ5 524 aaKnown RBP13.42□□□□□ -0.26
CNTNAP1-204ENST00000591662 MCM2P49736 904 aa13.42□□□□□ -0.26
CNTNAP1-204ENST00000591662 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
CNTNAP1-204ENST00000591662 NGDNQ8NEJ9 315 aaKnown RBP13.41□□□□□ -0.26
CNTNAP1-204ENST00000591662 TSPY26PQ9H489 355 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms