RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 NEUROD1Q13562 356 aa25.16■■□□□ 1.62
AP3D1-211ENST00000591650 STRCQ7RTU9 1775 aa25.16■■□□□ 1.62
AP3D1-211ENST00000591650 RGL3Q3MIN7 710 aa25.13■■□□□ 1.61
AP3D1-211ENST00000591650 ZNF326Q5BKZ1 582 aaKnown RBP25.13■■□□□ 1.61
AP3D1-211ENST00000591650 SCAF11Q99590 1463 aaKnown RBP25.12■■□□□ 1.61
AP3D1-211ENST00000591650 NCKAP5LQ9HCH0 1330 aa25.1■■□□□ 1.61
AP3D1-211ENST00000591650 IQGAP1P46940 1657 aa25.09■■□□□ 1.61
AP3D1-211ENST00000591650 MYOM2P54296 1465 aa25.08■■□□□ 1.61
AP3D1-211ENST00000591650 NRXN3Q9Y4C0 1643 aa25.07■■□□□ 1.6
AP3D1-211ENST00000591650 LTKP29376 864 aa25.06■■□□□ 1.6
AP3D1-211ENST00000591650 NUTM2DQ5VT03 806 aaPredicted RBP25.06■■□□□ 1.6
AP3D1-211ENST00000591650 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
AP3D1-211ENST00000591650 TONSLQ96HA7 1378 aa25.05■■□□□ 1.6
AP3D1-211ENST00000591650 ANKLE2Q86XL3 938 aa25.04■■□□□ 1.6
AP3D1-211ENST00000591650 MED14O60244 1454 aa25.03■■□□□ 1.6
AP3D1-211ENST00000591650 NRXN1Q9ULB1 1477 aa25.03■■□□□ 1.6
AP3D1-211ENST00000591650 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
AP3D1-211ENST00000591650 SETBP1Q9Y6X0 1596 aa25.02■■□□□ 1.6
AP3D1-211ENST00000591650 SETD1AO15047 1707 aaKnown RBP25.02■■□□□ 1.6
AP3D1-211ENST00000591650 L3MBTL2Q969R5 705 aa25.02■■□□□ 1.6
AP3D1-211ENST00000591650 PPP1R15AO75807 674 aaPredicted RBP25.01■■□□□ 1.59
AP3D1-211ENST00000591650 EID1Q9Y6B2 187 aa25.01■■□□□ 1.59
AP3D1-211ENST00000591650 ABCF1Q8NE71 845 aaKnown RBP eCLIP25■■□□□ 1.59
AP3D1-211ENST00000591650 PLEKHG1Q9ULL1 1385 aa25■■□□□ 1.59
AP3D1-211ENST00000591650 NPHP4O75161 1426 aaPredicted RBP24.99■■□□□ 1.59
AP3D1-211ENST00000591650 DCAF11Q8TEB1 546 aa24.99■■□□□ 1.59
AP3D1-211ENST00000591650 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
AP3D1-211ENST00000591650 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
AP3D1-211ENST00000591650 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
AP3D1-211ENST00000591650 LAMC1P11047 1609 aa24.96■■□□□ 1.59
AP3D1-211ENST00000591650 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.59
AP3D1-211ENST00000591650 VGFO15240 615 aaPredicted RBP24.95■■□□□ 1.58
AP3D1-211ENST00000591650 HDGFP51858 240 aaKnown RBP24.95■■□□□ 1.58
AP3D1-211ENST00000591650 DIP2AQ14689 1571 aa24.95■■□□□ 1.58
AP3D1-211ENST00000591650 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.58
AP3D1-211ENST00000591650 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
AP3D1-211ENST00000591650 ALKQ9UM73 1620 aa24.94■■□□□ 1.58
AP3D1-211ENST00000591650 DMRT2Q9Y5R5 561 aa24.92■■□□□ 1.58
AP3D1-211ENST00000591650 TRPM1Q7Z4N2 1603 aa24.91■■□□□ 1.58
AP3D1-211ENST00000591650 KIAA1210Q9ULL0 1709 aa24.91■■□□□ 1.58
AP3D1-211ENST00000591650 ASXL1Q8IXJ9 1541 aa24.91■■□□□ 1.58
AP3D1-211ENST00000591650 BCANQ96GW7 911 aa24.86■■□□□ 1.57
AP3D1-211ENST00000591650 STAC3Q96MF2 364 aa24.86■■□□□ 1.57
AP3D1-211ENST00000591650 TIMELESSQ9UNS1 1208 aa24.86■■□□□ 1.57
AP3D1-211ENST00000591650 SLC26A8Q96RN1 970 aa24.86■■□□□ 1.57
AP3D1-211ENST00000591650 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
AP3D1-211ENST00000591650 STRCP1A6NGW2 1772 aa24.83■■□□□ 1.57
AP3D1-211ENST00000591650 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
AP3D1-211ENST00000591650 CHD2O14647 1828 aaKnown RBP24.83■■□□□ 1.57
AP3D1-211ENST00000591650 XRN1Q8IZH2 1706 aaKnown RBP24.82■■□□□ 1.56
AP3D1-211ENST00000591650 NWD1Q149M9 1564 aa24.81■■□□□ 1.56
AP3D1-211ENST00000591650 RALGAPBQ86X10 1494 aa24.81■■□□□ 1.56
AP3D1-211ENST00000591650 METP08581 1390 aa24.81■■□□□ 1.56
AP3D1-211ENST00000591650 CFAP70Q5T0N1 1121 aa24.8■■□□□ 1.56
AP3D1-211ENST00000591650 C14orf93Q9H972 538 aaKnown RBP24.79■■□□□ 1.56
AP3D1-211ENST00000591650 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
AP3D1-211ENST00000591650 ZNF335Q9H4Z2 1342 aaPredicted RBP24.78■■□□□ 1.56
AP3D1-211ENST00000591650 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
AP3D1-211ENST00000591650 TBX22Q9Y458 520 aa24.78■■□□□ 1.56
AP3D1-211ENST00000591650 PIK3R4Q99570 1358 aa24.74■■□□□ 1.55
AP3D1-211ENST00000591650 ARHGEF28Q8N1W1 1705 aaKnown RBP24.73■■□□□ 1.55
AP3D1-211ENST00000591650 CPS1P31327 1500 aa24.72■■□□□ 1.55
AP3D1-211ENST00000591650 NBPF1Q3BBV0 1214 aa24.72■■□□□ 1.55
AP3D1-211ENST00000591650 TMEM132EQ6IEE7 984 aa24.72■■□□□ 1.55
AP3D1-211ENST00000591650 YTHDC2Q9H6S0 1430 aaKnown RBP24.72■■□□□ 1.55
AP3D1-211ENST00000591650 ROCK2O75116 1388 aaKnown RBP24.71■■□□□ 1.55
AP3D1-211ENST00000591650 GPRASP1Q5JY77 1395 aa24.7■■□□□ 1.54
AP3D1-211ENST00000591650 LTBP4Q8N2S1 1624 aa24.69■■□□□ 1.54
AP3D1-211ENST00000591650 NKTRP30414 1462 aaKnown RBP24.69■■□□□ 1.54
AP3D1-211ENST00000591650 LRPPRCP42704 1394 aaKnown RBP24.68■■□□□ 1.54
AP3D1-211ENST00000591650 TECPR2O15040 1411 aa24.68■■□□□ 1.54
AP3D1-211ENST00000591650 XIRP1Q702N8 1843 aaKnown RBP24.66■■□□□ 1.54
AP3D1-211ENST00000591650 KCNA6P17658 529 aa24.66■■□□□ 1.54
AP3D1-211ENST00000591650 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
AP3D1-211ENST00000591650 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
AP3D1-211ENST00000591650 AMOTL2Q9Y2J4 779 aa24.64■■□□□ 1.54
AP3D1-211ENST00000591650 STK26Q9P289 416 aa24.63■■□□□ 1.53
AP3D1-211ENST00000591650 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
AP3D1-211ENST00000591650 ROBO2Q9HCK4 1378 aa24.62■■□□□ 1.53
AP3D1-211ENST00000591650 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
AP3D1-211ENST00000591650 QRICH2Q9H0J4 1663 aa24.6■■□□□ 1.53
AP3D1-211ENST00000591650 LRRC7Q96NW7 1537 aa24.59■■□□□ 1.53
AP3D1-211ENST00000591650 CARD11Q9BXL7 1154 aa24.59■■□□□ 1.53
AP3D1-211ENST00000591650 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
AP3D1-211ENST00000591650 TRAK1Q9UPV9 953 aa24.58■■□□□ 1.53
AP3D1-211ENST00000591650 PLEKHH1Q9ULM0 1364 aa24.57■■□□□ 1.52
AP3D1-211ENST00000591650 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.56■■□□□ 1.52
AP3D1-211ENST00000591650 FAM135BQ49AJ0 1406 aa24.56■■□□□ 1.52
AP3D1-211ENST00000591650 RBM33Q96EV2 1170 aaKnown RBP24.55■■□□□ 1.52
AP3D1-211ENST00000591650 CERKQ8TCT0 537 aa24.54■■□□□ 1.52
AP3D1-211ENST00000591650 USP47Q96K76 1375 aa24.53■■□□□ 1.52
AP3D1-211ENST00000591650 TMEM94Q12767 1356 aa24.52■■□□□ 1.52
AP3D1-211ENST00000591650 PROSER2Q86WR7 435 aaPredicted RBP24.52■■□□□ 1.52
AP3D1-211ENST00000591650 EIF3AQ14152 1382 aaKnown RBP24.52■■□□□ 1.52
AP3D1-211ENST00000591650 WAPLQ7Z5K2 1190 aa24.51■■□□□ 1.51
AP3D1-211ENST00000591650 ILDR1Q86SU0 546 aaPredicted RBP24.51■■□□□ 1.51
AP3D1-211ENST00000591650 PRAM1Q96QH2 718 aa24.51■■□□□ 1.51
AP3D1-211ENST00000591650 ADGRB2O60241 1585 aa24.5■■□□□ 1.51
AP3D1-211ENST00000591650 ADGRL3Q9HAR2 1447 aa24.49■■□□□ 1.51
AP3D1-211ENST00000591650 SAFB2Q14151 953 aaKnown RBP eCLIP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms