RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
SMARCA4-216ENST00000591545 CLSTN1O94985 981 aa16.51■□□□□ 0.23
SMARCA4-216ENST00000591545 NLRP6P59044 892 aa16.5■□□□□ 0.23
SMARCA4-216ENST00000591545 SLC52A1Q9NWF4 448 aa16.49■□□□□ 0.23
SMARCA4-216ENST00000591545 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-216ENST00000591545 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
SMARCA4-216ENST00000591545 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
SMARCA4-216ENST00000591545 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
SMARCA4-216ENST00000591545 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
SMARCA4-216ENST00000591545 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
SMARCA4-216ENST00000591545 TRIM6-TRIM34B2RNG4 842 aa16.48■□□□□ 0.23
SMARCA4-216ENST00000591545 PHF14O94880 888 aa16.48■□□□□ 0.23
SMARCA4-216ENST00000591545 GZF1Q9H116 711 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 DDX58O95786 925 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-216ENST00000591545 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
SMARCA4-216ENST00000591545 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
SMARCA4-216ENST00000591545 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-216ENST00000591545 TIAM1Q13009 1591 aa16.46■□□□□ 0.23
SMARCA4-216ENST00000591545 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.23
SMARCA4-216ENST00000591545 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-216ENST00000591545 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
SMARCA4-216ENST00000591545 CENPQQ7L2Z9 268 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-216ENST00000591545 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
SMARCA4-216ENST00000591545 ABTB2Q8N961 1025 aa16.44■□□□□ 0.22
SMARCA4-216ENST00000591545 ST18O60284 1047 aa16.43■□□□□ 0.22
SMARCA4-216ENST00000591545 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
SMARCA4-216ENST00000591545 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-216ENST00000591545 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
SMARCA4-216ENST00000591545 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
SMARCA4-216ENST00000591545 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-216ENST00000591545 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-216ENST00000591545 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
SMARCA4-216ENST00000591545 E9PSI1 815 aa16.41■□□□□ 0.22
SMARCA4-216ENST00000591545 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
SMARCA4-216ENST00000591545 LRRFIP1Q32MZ4 808 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-216ENST00000591545 C9orf84Q5VXU9 1444 aa16.4■□□□□ 0.22
SMARCA4-216ENST00000591545 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-216ENST00000591545 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
SMARCA4-216ENST00000591545 HFM1A2PYH4 1435 aa16.39■□□□□ 0.22
SMARCA4-216ENST00000591545 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
SMARCA4-216ENST00000591545 RIPK4P57078 832 aa16.39■□□□□ 0.21
SMARCA4-216ENST00000591545 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
SMARCA4-216ENST00000591545 GGNBP2Q9H3C7 697 aa16.39■□□□□ 0.21
SMARCA4-216ENST00000591545 HSP90B1P14625 803 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-216ENST00000591545 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
SMARCA4-216ENST00000591545 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
SMARCA4-216ENST00000591545 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
SMARCA4-216ENST00000591545 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
SMARCA4-216ENST00000591545 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
SMARCA4-216ENST00000591545 CD109Q6YHK3 1445 aa16.37■□□□□ 0.21
SMARCA4-216ENST00000591545 GOLGA6L1Q8N7Z2 621 aa16.37■□□□□ 0.21
SMARCA4-216ENST00000591545 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
SMARCA4-216ENST00000591545 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
SMARCA4-216ENST00000591545 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-216ENST00000591545 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-216ENST00000591545 VPS37DQ86XT2 251 aa16.36■□□□□ 0.21
SMARCA4-216ENST00000591545 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-216ENST00000591545 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
SMARCA4-216ENST00000591545 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
SMARCA4-216ENST00000591545 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 APAF1O14727 1248 aa16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 SLC26A8Q96RN1 970 aa16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 GNAI1P63096 354 aa16.35■□□□□ 0.21
SMARCA4-216ENST00000591545 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 PIP4K2BP78356 416 aa16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 PDE4AP27815 886 aa16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-216ENST00000591545 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.21
SMARCA4-216ENST00000591545 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.21
SMARCA4-216ENST00000591545 RUNDC1Q96C34 613 aa16.33■□□□□ 0.21
SMARCA4-216ENST00000591545 TNNT3P45378 269 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-216ENST00000591545 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-216ENST00000591545 NECTIN2Q92692 538 aa16.33■□□□□ 0.2
SMARCA4-216ENST00000591545 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-216ENST00000591545 HMOX1P09601 288 aa16.32■□□□□ 0.2
SMARCA4-216ENST00000591545 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-216ENST00000591545 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-216ENST00000591545 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
SMARCA4-216ENST00000591545 GAS2L2Q8NHY3 880 aa16.31■□□□□ 0.2
SMARCA4-216ENST00000591545 MARCH6O60337 910 aa16.31■□□□□ 0.2
SMARCA4-216ENST00000591545 GSE1Q14687 1217 aa16.31■□□□□ 0.2
SMARCA4-216ENST00000591545 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
SMARCA4-216ENST00000591545 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-216ENST00000591545 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
SMARCA4-216ENST00000591545 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
SMARCA4-216ENST00000591545 ROCK1Q13464 1354 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms