RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 HDGFP51858 240 aaKnown RBP27.61■■■□□ 2.01
MBD1-223ENST00000590215 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
MBD1-223ENST00000590215 KIF1BO60333 1816 aa27.59■■■□□ 2.01
MBD1-223ENST00000590215 IQGAP1P46940 1657 aa27.57■■■□□ 2
MBD1-223ENST00000590215 SPATA31E1Q6ZUB1 1445 aa27.55■■■□□ 2
MBD1-223ENST00000590215 PLEKHG1Q9ULL1 1385 aa27.54■■■□□ 2
MBD1-223ENST00000590215 RPGRIP1LQ68CZ1 1315 aa27.53■■■□□ 2
MBD1-223ENST00000590215 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
MBD1-223ENST00000590215 NEXMIFQ5QGS0 1516 aa27.51■■□□□ 1.99
MBD1-223ENST00000590215 PPP1R15AO75807 674 aaPredicted RBP27.5■■□□□ 1.99
MBD1-223ENST00000590215 NUTM2DQ5VT03 806 aaPredicted RBP27.47■■□□□ 1.99
MBD1-223ENST00000590215 PCGF6Q9BYE7 350 aa27.47■■□□□ 1.99
MBD1-223ENST00000590215 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
MBD1-223ENST00000590215 LTBP4Q8N2S1 1624 aa27.45■■□□□ 1.99
MBD1-223ENST00000590215 ZNF335Q9H4Z2 1342 aaPredicted RBP27.45■■□□□ 1.99
MBD1-223ENST00000590215 VGFO15240 615 aaPredicted RBP27.43■■□□□ 1.98
MBD1-223ENST00000590215 ADAMTS13Q76LX8 1427 aa27.42■■□□□ 1.98
MBD1-223ENST00000590215 RGL3Q3MIN7 710 aa27.42■■□□□ 1.98
MBD1-223ENST00000590215 SLC26A8Q96RN1 970 aa27.41■■□□□ 1.98
MBD1-223ENST00000590215 TBX22Q9Y458 520 aa27.41■■□□□ 1.98
MBD1-223ENST00000590215 PPLO60437 1756 aa27.4■■□□□ 1.98
MBD1-223ENST00000590215 SETBP1Q9Y6X0 1596 aa27.4■■□□□ 1.98
MBD1-223ENST00000590215 BCANQ96GW7 911 aa27.38■■□□□ 1.97
MBD1-223ENST00000590215 DIP2AQ14689 1571 aa27.37■■□□□ 1.97
MBD1-223ENST00000590215 NRXN3Q9Y4C0 1643 aa27.36■■□□□ 1.97
MBD1-223ENST00000590215 IFT172Q9UG01 1749 aa27.36■■□□□ 1.97
MBD1-223ENST00000590215 CERKQ8TCT0 537 aa27.34■■□□□ 1.97
MBD1-223ENST00000590215 CPS1P31327 1500 aa27.34■■□□□ 1.97
MBD1-223ENST00000590215 PIK3R4Q99570 1358 aa27.34■■□□□ 1.97
MBD1-223ENST00000590215 KCNA6P17658 529 aa27.32■■□□□ 1.96
MBD1-223ENST00000590215 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
MBD1-223ENST00000590215 ADGRF5Q8IZF2 1346 aa27.32■■□□□ 1.96
MBD1-223ENST00000590215 STRCP1A6NGW2 1772 aa27.31■■□□□ 1.96
MBD1-223ENST00000590215 MYOM2P54296 1465 aa27.3■■□□□ 1.96
MBD1-223ENST00000590215 STAC3Q96MF2 364 aa27.29■■□□□ 1.96
MBD1-223ENST00000590215 NRXN1Q9ULB1 1477 aa27.29■■□□□ 1.96
MBD1-223ENST00000590215 NWD1Q149M9 1564 aa27.28■■□□□ 1.96
MBD1-223ENST00000590215 IQSEC2Q5JU85 1478 aa27.28■■□□□ 1.96
MBD1-223ENST00000590215 PIK3C2GO75747 1445 aa27.26■■□□□ 1.95
MBD1-223ENST00000590215 CHD2O14647 1828 aaKnown RBP27.26■■□□□ 1.95
MBD1-223ENST00000590215 SIN3AQ96ST3 1273 aa27.25■■□□□ 1.95
MBD1-223ENST00000590215 METP08581 1390 aa27.24■■□□□ 1.95
MBD1-223ENST00000590215 ALKQ9UM73 1620 aa27.24■■□□□ 1.95
MBD1-223ENST00000590215 LRRC7Q96NW7 1537 aa27.24■■□□□ 1.95
MBD1-223ENST00000590215 NKTRP30414 1462 aaKnown RBP27.23■■□□□ 1.95
MBD1-223ENST00000590215 PTPRUQ92729 1446 aa27.23■■□□□ 1.95
MBD1-223ENST00000590215 SETD1AO15047 1707 aaKnown RBP27.22■■□□□ 1.95
MBD1-223ENST00000590215 DCAF11Q8TEB1 546 aa27.22■■□□□ 1.95
MBD1-223ENST00000590215 C14orf93Q9H972 538 aaKnown RBP27.18■■□□□ 1.94
MBD1-223ENST00000590215 AMOTL2Q9Y2J4 779 aa27.18■■□□□ 1.94
MBD1-223ENST00000590215 KDM2AQ9Y2K7 1162 aa27.16■■□□□ 1.94
MBD1-223ENST00000590215 XRN1Q8IZH2 1706 aaKnown RBP27.16■■□□□ 1.94
MBD1-223ENST00000590215 NEUROD1Q13562 356 aa27.15■■□□□ 1.94
MBD1-223ENST00000590215 PROSER2Q86WR7 435 aaPredicted RBP27.15■■□□□ 1.94
MBD1-223ENST00000590215 PRAG1Q86YV5 1406 aa27.15■■□□□ 1.94
MBD1-223ENST00000590215 TMEM94Q12767 1356 aa27.13■■□□□ 1.93
MBD1-223ENST00000590215 L3MBTL2Q969R5 705 aa27.13■■□□□ 1.93
MBD1-223ENST00000590215 CLSPNQ9HAW4 1339 aa27.13■■□□□ 1.93
MBD1-223ENST00000590215 NCOA3Q9Y6Q9 1424 aa27.12■■□□□ 1.93
MBD1-223ENST00000590215 CFAP70Q5T0N1 1121 aa27.11■■□□□ 1.93
MBD1-223ENST00000590215 ASXL1Q8IXJ9 1541 aa27.11■■□□□ 1.93
MBD1-223ENST00000590215 LAMC1P11047 1609 aa27.1■■□□□ 1.93
MBD1-223ENST00000590215 FBXO41Q8TF61 875 aa27.1■■□□□ 1.93
MBD1-223ENST00000590215 XIRP1Q702N8 1843 aaKnown RBP27.1■■□□□ 1.93
MBD1-223ENST00000590215 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
MBD1-223ENST00000590215 LRPPRCP42704 1394 aaKnown RBP27.07■■□□□ 1.92
MBD1-223ENST00000590215 TMEM132EQ6IEE7 984 aa27.06■■□□□ 1.92
MBD1-223ENST00000590215 ABCC11Q96J66 1382 aa27.06■■□□□ 1.92
MBD1-223ENST00000590215 TECPR2O15040 1411 aa27.06■■□□□ 1.92
MBD1-223ENST00000590215 RBM33Q96EV2 1170 aaKnown RBP27.04■■□□□ 1.92
MBD1-223ENST00000590215 ADGRB1O14514 1584 aa27.04■■□□□ 1.92
MBD1-223ENST00000590215 YTHDC2Q9H6S0 1430 aaKnown RBP27.03■■□□□ 1.92
MBD1-223ENST00000590215 ROBO2Q9HCK4 1378 aa27.03■■□□□ 1.92
MBD1-223ENST00000590215 TONSLQ96HA7 1378 aa27■■□□□ 1.91
MBD1-223ENST00000590215 UBAP1LF5GYI3 381 aa27■■□□□ 1.91
MBD1-223ENST00000590215 SIRT1Q96EB6 747 aa27■■□□□ 1.91
MBD1-223ENST00000590215 TOM1O60784 492 aa26.99■■□□□ 1.91
MBD1-223ENST00000590215 KIAA1210Q9ULL0 1709 aa26.99■■□□□ 1.91
MBD1-223ENST00000590215 MSH6P52701 1360 aa26.98■■□□□ 1.91
MBD1-223ENST00000590215 KNDC1Q76NI1 1749 aa26.98■■□□□ 1.91
MBD1-223ENST00000590215 C19orf44Q9H6X5 657 aa26.97■■□□□ 1.91
MBD1-223ENST00000590215 STK26Q9P289 416 aa26.97■■□□□ 1.91
MBD1-223ENST00000590215 CCER1Q8TC90 406 aaPredicted RBP26.96■■□□□ 1.91
MBD1-223ENST00000590215 FAM135BQ49AJ0 1406 aa26.95■■□□□ 1.9
MBD1-223ENST00000590215 ADGRL3Q9HAR2 1447 aa26.93■■□□□ 1.9
MBD1-223ENST00000590215 ILDR1Q86SU0 546 aaPredicted RBP26.93■■□□□ 1.9
MBD1-223ENST00000590215 TIMELESSQ9UNS1 1208 aa26.93■■□□□ 1.9
MBD1-223ENST00000590215 DLC1Q96QB1 1528 aa26.93■■□□□ 1.9
MBD1-223ENST00000590215 DCCP43146 1447 aa26.92■■□□□ 1.9
MBD1-223ENST00000590215 C14orf37Q86TY3 774 aa26.92■■□□□ 1.9
MBD1-223ENST00000590215 NBPF1Q3BBV0 1214 aa26.91■■□□□ 1.9
MBD1-223ENST00000590215 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
MBD1-223ENST00000590215 WAPLQ7Z5K2 1190 aa26.9■■□□□ 1.9
MBD1-223ENST00000590215 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.9■■□□□ 1.9
MBD1-223ENST00000590215 CADPS2Q86UW7 1296 aa26.89■■□□□ 1.9
MBD1-223ENST00000590215 PLEKHH1Q9ULM0 1364 aa26.88■■□□□ 1.89
MBD1-223ENST00000590215 TRPM1Q7Z4N2 1603 aa26.87■■□□□ 1.89
MBD1-223ENST00000590215 ATF3P18847 181 aa26.86■■□□□ 1.89
MBD1-223ENST00000590215 NALCNQ8IZF0 1738 aa26.86■■□□□ 1.89
MBD1-223ENST00000590215 TRAK1Q9UPV9 953 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms