RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 WASHC2AQ641Q2 1341 aa17.84■□□□□ 0.45
SMARCA4-214ENST00000589677 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
SMARCA4-214ENST00000589677 INTS3Q68E01 1043 aaKnown RBP17.84■□□□□ 0.45
SMARCA4-214ENST00000589677 TERF2IPQ9NYB0 399 aa17.84■□□□□ 0.45
SMARCA4-214ENST00000589677 HOMER1Q86YM7 354 aa17.83■□□□□ 0.45
SMARCA4-214ENST00000589677 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
SMARCA4-214ENST00000589677 SLC4A10Q6U841 1118 aa17.82■□□□□ 0.44
SMARCA4-214ENST00000589677 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
SMARCA4-214ENST00000589677 TPM1P09493 284 aa17.82■□□□□ 0.44
SMARCA4-214ENST00000589677 ACBD3Q9H3P7 528 aa17.82■□□□□ 0.44
SMARCA4-214ENST00000589677 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
SMARCA4-214ENST00000589677 SAFB2Q14151 953 aaKnown RBP eCLIP17.81■□□□□ 0.442e-6■□□□□ 10.3
SMARCA4-214ENST00000589677 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
SMARCA4-214ENST00000589677 MNS1Q8NEH6 495 aa17.81■□□□□ 0.44
SMARCA4-214ENST00000589677 TAF3Q5VWG9 929 aa17.8■□□□□ 0.44
SMARCA4-214ENST00000589677 CAVIN1Q6NZI2 390 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-214ENST00000589677 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
SMARCA4-214ENST00000589677 A0A0G2JS52 829 aa17.8■□□□□ 0.44
SMARCA4-214ENST00000589677 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
SMARCA4-214ENST00000589677 JPH4Q96JJ6 628 aa17.8■□□□□ 0.44
SMARCA4-214ENST00000589677 TSR1Q2NL82 804 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-214ENST00000589677 TSPY26PQ9H489 355 aa17.79■□□□□ 0.44
SMARCA4-214ENST00000589677 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
SMARCA4-214ENST00000589677 UQCRHLA0A096LP55 91 aa17.78■□□□□ 0.44
SMARCA4-214ENST00000589677 UQCRHP07919 91 aa17.78■□□□□ 0.44
SMARCA4-214ENST00000589677 RSPH4AQ5TD94 716 aa17.78■□□□□ 0.44
SMARCA4-214ENST00000589677 CDC45O75419 566 aa17.78■□□□□ 0.44
SMARCA4-214ENST00000589677 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
SMARCA4-214ENST00000589677 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
SMARCA4-214ENST00000589677 IGF1RP08069 1367 aa17.76■□□□□ 0.43
SMARCA4-214ENST00000589677 MCM4P33991 863 aa17.76■□□□□ 0.43
SMARCA4-214ENST00000589677 RNF214Q8ND24 703 aa17.76■□□□□ 0.43
SMARCA4-214ENST00000589677 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
SMARCA4-214ENST00000589677 HSP90B2PQ58FF3 399 aa17.76■□□□□ 0.43
SMARCA4-214ENST00000589677 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
SMARCA4-214ENST00000589677 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-214ENST00000589677 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-214ENST00000589677 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
SMARCA4-214ENST00000589677 ROCK1Q13464 1354 aa17.75■□□□□ 0.43
SMARCA4-214ENST00000589677 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
SMARCA4-214ENST00000589677 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 CALRP27797 417 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 ZSCAN30Q86W11 494 aa17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 PDE3AQ14432 1141 aa17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 TPD52L1Q16890 204 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
SMARCA4-214ENST00000589677 PANK1Q8TE04 598 aa17.73■□□□□ 0.43
SMARCA4-214ENST00000589677 LNPKQ9C0E8 428 aa17.73■□□□□ 0.43
SMARCA4-214ENST00000589677 STK26Q9P289 416 aa17.73■□□□□ 0.43
SMARCA4-214ENST00000589677 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
SMARCA4-214ENST00000589677 APPP05067 770 aa17.73■□□□□ 0.43
SMARCA4-214ENST00000589677 RABEP1Q15276 862 aa17.72■□□□□ 0.43
SMARCA4-214ENST00000589677 CREBRFQ8IUR6 639 aa17.72■□□□□ 0.43
SMARCA4-214ENST00000589677 SOX12O15370 315 aa17.72■□□□□ 0.43
SMARCA4-214ENST00000589677 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-214ENST00000589677 MCM2P49736 904 aa17.71■□□□□ 0.43
SMARCA4-214ENST00000589677 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-214ENST00000589677 AK7Q96M32 723 aa17.71■□□□□ 0.43
SMARCA4-214ENST00000589677 PDZRN3Q9UPQ7 1066 aa17.71■□□□□ 0.43
SMARCA4-214ENST00000589677 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
SMARCA4-214ENST00000589677 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
SMARCA4-214ENST00000589677 CDCA7LQ96GN5 454 aa17.7■□□□□ 0.42
SMARCA4-214ENST00000589677 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
SMARCA4-214ENST00000589677 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
SMARCA4-214ENST00000589677 GGT6Q6P531 493 aa17.69■□□□□ 0.42
SMARCA4-214ENST00000589677 NAT10Q9H0A0 1025 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-214ENST00000589677 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-214ENST00000589677 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
SMARCA4-214ENST00000589677 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 IPO7O95373 1038 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 ERCC4Q92889 916 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 CCP110O43303 1012 aa17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 CCDC73Q6ZRK6 1079 aa17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-214ENST00000589677 HOOK1Q9UJC3 728 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 WASHC2CQ9Y4E1 1318 aa17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 KIF21BO75037 1637 aa17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 HNRNPMP52272 730 aaKnown RBP eCLIP17.67■□□□□ 0.425e-6■■□□□ 11.8
SMARCA4-214ENST00000589677 PDCL2Q8N4E4 241 aa17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
SMARCA4-214ENST00000589677 ELL2O00472 640 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-214ENST00000589677 LEKR1Q6ZMV7 388 aa17.66■□□□□ 0.42
SMARCA4-214ENST00000589677 LMOD2Q6P5Q4 547 aa17.66■□□□□ 0.42
SMARCA4-214ENST00000589677 ANKRD20A12PQ8NF67 263 aa17.66■□□□□ 0.42
SMARCA4-214ENST00000589677 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-214ENST00000589677 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
SMARCA4-214ENST00000589677 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-214ENST00000589677 FGD6Q6ZV73 1430 aa17.65■□□□□ 0.42
SMARCA4-214ENST00000589677 RUFY1Q96T51 708 aa17.65■□□□□ 0.42
SMARCA4-214ENST00000589677 K7ELQ4 463 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-214ENST00000589677 PES1O00541 588 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-214ENST00000589677 CCDC112Q8NEF3 446 aa17.65■□□□□ 0.42
SMARCA4-214ENST00000589677 CFTRP13569 1480 aa17.64■□□□□ 0.41
SMARCA4-214ENST00000589677 CDR1P51861 262 aa17.64■□□□□ 0.41
SMARCA4-214ENST00000589677 ZMYND15Q9H091 742 aa17.64■□□□□ 0.41
SMARCA4-214ENST00000589677 PTPRGP23470 1445 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms