RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RALBP1Q15311 655 aa14.23□□□□□ -0.13
VPS25-203ENST00000589520 TESK2Q96S53 571 aa14.23□□□□□ -0.13
VPS25-203ENST00000589520 KIAA1210Q9ULL0 1709 aa14.23□□□□□ -0.13
VPS25-203ENST00000589520 SCAF11Q99590 1463 aaKnown RBP14.23□□□□□ -0.13
VPS25-203ENST00000589520 ZC3H13Q5T200 1668 aaKnown RBP14.23□□□□□ -0.13
VPS25-203ENST00000589520 MADDQ8WXG6 1647 aa14.23□□□□□ -0.13
VPS25-203ENST00000589520 AGLP35573 1532 aa14.21□□□□□ -0.13
VPS25-203ENST00000589520 KIF1BO60333 1816 aa14.21□□□□□ -0.13
VPS25-203ENST00000589520 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
VPS25-203ENST00000589520 NRXN1Q9ULB1 1477 aa14.2□□□□□ -0.14
VPS25-203ENST00000589520 YEATS2Q9ULM3 1422 aa14.19□□□□□ -0.14
VPS25-203ENST00000589520 ADGRB3O60242 1522 aa14.19□□□□□ -0.14
VPS25-203ENST00000589520 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
VPS25-203ENST00000589520 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
VPS25-203ENST00000589520 CAMSAP1Q5T5Y3 1602 aa14.17□□□□□ -0.14
VPS25-203ENST00000589520 C14orf93Q9H972 538 aaKnown RBP14.16□□□□□ -0.14
VPS25-203ENST00000589520 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
VPS25-203ENST00000589520 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
VPS25-203ENST00000589520 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.15
VPS25-203ENST00000589520 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
VPS25-203ENST00000589520 SBNO2Q9Y2G9 1366 aa14.13□□□□□ -0.15
VPS25-203ENST00000589520 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
VPS25-203ENST00000589520 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
VPS25-203ENST00000589520 IQGAP1P46940 1657 aa14.13□□□□□ -0.15
VPS25-203ENST00000589520 MYBBP1AQ9BQG0 1328 aaKnown RBP14.13□□□□□ -0.15
VPS25-203ENST00000589520 BRD4O60885 1362 aaPredicted RBP14.12□□□□□ -0.15
VPS25-203ENST00000589520 CERKQ8TCT0 537 aa14.12□□□□□ -0.15
VPS25-203ENST00000589520 PUS7Q96PZ0 661 aaKnown RBP14.12□□□□□ -0.15
VPS25-203ENST00000589520 UGGT1Q9NYU2 1555 aa14.12□□□□□ -0.15
VPS25-203ENST00000589520 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
VPS25-203ENST00000589520 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
VPS25-203ENST00000589520 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
VPS25-203ENST00000589520 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
VPS25-203ENST00000589520 IDI1Q13907 227 aa14.11□□□□□ -0.15
VPS25-203ENST00000589520 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
VPS25-203ENST00000589520 TMC1Q8TDI8 760 aa14.09□□□□□ -0.15
VPS25-203ENST00000589520 PANK3Q9H999 370 aa14.09□□□□□ -0.15
VPS25-203ENST00000589520 PARD3Q8TEW0 1356 aa14.08□□□□□ -0.16
VPS25-203ENST00000589520 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.16
VPS25-203ENST00000589520 FAM9BQ8IZU0 186 aa14.07□□□□□ -0.16
VPS25-203ENST00000589520 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
VPS25-203ENST00000589520 SYNMO15061 1565 aa14.07□□□□□ -0.16
VPS25-203ENST00000589520 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
VPS25-203ENST00000589520 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
VPS25-203ENST00000589520 INSRP06213 1382 aa14.07□□□□□ -0.16
VPS25-203ENST00000589520 PPLO60437 1756 aa14.06□□□□□ -0.16
VPS25-203ENST00000589520 CCDC184Q52MB2 194 aa14.06□□□□□ -0.16
VPS25-203ENST00000589520 PNISRQ8TF01 805 aaKnown RBP14.06□□□□□ -0.16
VPS25-203ENST00000589520 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
VPS25-203ENST00000589520 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
VPS25-203ENST00000589520 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
VPS25-203ENST00000589520 ERVK-7P63135 1459 aa14.05□□□□□ -0.16
VPS25-203ENST00000589520 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
VPS25-203ENST00000589520 PTPRMP28827 1452 aa14.04□□□□□ -0.16
VPS25-203ENST00000589520 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
VPS25-203ENST00000589520 NEFLP07196 543 aa14.03□□□□□ -0.16
VPS25-203ENST00000589520 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
VPS25-203ENST00000589520 NEXMIFQ5QGS0 1516 aa14.03□□□□□ -0.16
VPS25-203ENST00000589520 MYO3AQ8NEV4 1616 aa14.03□□□□□ -0.16
VPS25-203ENST00000589520 PREX1Q8TCU6 1659 aa14.03□□□□□ -0.16
VPS25-203ENST00000589520 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
VPS25-203ENST00000589520 ADGRB1O14514 1584 aa14.01□□□□□ -0.17
VPS25-203ENST00000589520 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
VPS25-203ENST00000589520 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
VPS25-203ENST00000589520 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
VPS25-203ENST00000589520 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
VPS25-203ENST00000589520 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
VPS25-203ENST00000589520 FBXO31Q5XUX0 539 aaPredicted RBP13.99□□□□□ -0.17
VPS25-203ENST00000589520 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
VPS25-203ENST00000589520 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
VPS25-203ENST00000589520 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
VPS25-203ENST00000589520 HSPA2P54652 639 aa13.98□□□□□ -0.17
VPS25-203ENST00000589520 TRAK1Q9UPV9 953 aa13.98□□□□□ -0.17
VPS25-203ENST00000589520 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
VPS25-203ENST00000589520 EVC2Q86UK5 1308 aa13.97□□□□□ -0.17
VPS25-203ENST00000589520 AMER1Q5JTC6 1135 aaPredicted RBP13.97□□□□□ -0.17
VPS25-203ENST00000589520 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
VPS25-203ENST00000589520 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
VPS25-203ENST00000589520 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
VPS25-203ENST00000589520 MLECQ14165 292 aa13.95□□□□□ -0.18
VPS25-203ENST00000589520 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
VPS25-203ENST00000589520 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
VPS25-203ENST00000589520 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
VPS25-203ENST00000589520 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
VPS25-203ENST00000589520 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
VPS25-203ENST00000589520 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
VPS25-203ENST00000589520 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
VPS25-203ENST00000589520 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
VPS25-203ENST00000589520 TNRQ92752 1358 aa13.91□□□□□ -0.18
VPS25-203ENST00000589520 RIMS1Q86UR5 1692 aaKnown RBP13.91□□□□□ -0.18
VPS25-203ENST00000589520 SMG6Q86US8 1419 aaKnown RBP13.9□□□□□ -0.18
VPS25-203ENST00000589520 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.18
VPS25-203ENST00000589520 FKBP8Q14318 412 aa13.9□□□□□ -0.18
VPS25-203ENST00000589520 NUTM2DQ5VT03 806 aaPredicted RBP13.9□□□□□ -0.18
VPS25-203ENST00000589520 ATAD2Q6PL18 1390 aa13.89□□□□□ -0.19
VPS25-203ENST00000589520 POGKQ9P215 609 aa13.89□□□□□ -0.19
VPS25-203ENST00000589520 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
VPS25-203ENST00000589520 NSD2O96028 1365 aa13.88□□□□□ -0.19
VPS25-203ENST00000589520 ABCC11Q96J66 1382 aa13.88□□□□□ -0.19
VPS25-203ENST00000589520 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms