RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 ABCA3Q99758 1704 aa3.06□□□□□ -1.92
ZNF260-203ENST00000588993 ABCC6O95255 1503 aa3.06□□□□□ -1.92
ZNF260-203ENST00000588993 LRRC7Q96NW7 1537 aa3.06□□□□□ -1.92
ZNF260-203ENST00000588993 RBBP6Q7Z6E9 1792 aaKnown RBP3.06□□□□□ -1.92
ZNF260-203ENST00000588993 PROM2Q8N271 834 aa3.05□□□□□ -1.92
ZNF260-203ENST00000588993 RBM33Q96EV2 1170 aaKnown RBP3.05□□□□□ -1.92
ZNF260-203ENST00000588993 ARHGEF5Q12774 1597 aa3.05□□□□□ -1.92
ZNF260-203ENST00000588993 TMEM131LA2VDJ0 1609 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 CHD4Q14839 1912 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 RAPGEF3O95398 923 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 JCADQ9P266 1359 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 ADGRB3O60242 1522 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 PREX2Q70Z35 1606 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 ABCC5O15440 1437 aa3.04□□□□□ -1.92
ZNF260-203ENST00000588993 MNX1P50219 401 aaPredicted RBP3.04□□□□□ -1.92
ZNF260-203ENST00000588993 SYCP2Q9BX26 1530 aa3.03□□□□□ -1.92
ZNF260-203ENST00000588993 HAX1O00165 279 aa3.03□□□□□ -1.92
ZNF260-203ENST00000588993 MMRN1Q13201 1228 aa3.03□□□□□ -1.92
ZNF260-203ENST00000588993 MAMSTRQ6ZN01 415 aa3.03□□□□□ -1.92
ZNF260-203ENST00000588993 ESF1Q9H501 851 aaKnown RBP3.03□□□□□ -1.92
ZNF260-203ENST00000588993 TNS1Q9HBL0 1735 aaKnown RBP3.03□□□□□ -1.92
ZNF260-203ENST00000588993 SLIT3O75094 1523 aa3.03□□□□□ -1.92
ZNF260-203ENST00000588993 RGS17Q9UGC6 210 aaPredicted RBP3.03□□□□□ -1.92
ZNF260-203ENST00000588993 LMTK2Q8IWU2 1503 aa3.03□□□□□ -1.93
ZNF260-203ENST00000588993 FYCO1Q9BQS8 1478 aa3.03□□□□□ -1.93
ZNF260-203ENST00000588993 PTCH1Q13635 1447 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 DUOX1Q9NRD9 1551 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 C11orf95C9JLR9 678 aaPredicted RBP3.02□□□□□ -1.93
ZNF260-203ENST00000588993 CAPN2P17655 700 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 NINLQ9Y2I6 1382 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 CDC42BPGQ6DT37 1551 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 KIF1AQ12756 1690 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 PLCH1Q4KWH8 1693 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 ZNF518AQ6AHZ1 1483 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 SPDYE1Q8NFV5 336 aaPredicted RBP3.02□□□□□ -1.93
ZNF260-203ENST00000588993 WNK3Q9BYP7 1800 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 KIF27Q86VH2 1401 aa3.02□□□□□ -1.93
ZNF260-203ENST00000588993 MST1RQ04912 1400 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 RXRBP28702 533 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 SGIP1Q9BQI5 828 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 ZNF831Q5JPB2 1677 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 RGPD8O14715 1765 aaPredicted RBP3.01□□□□□ -1.93
ZNF260-203ENST00000588993 RGPD5Q99666 1765 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 POTEAQ6S8J7 498 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 NGLY1Q96IV0 654 aa3.01□□□□□ -1.93
ZNF260-203ENST00000588993 C1orf167Q5SNV9 1468 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 RTEL1-TNFRSF6BF6WH68 1400 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 FMN1Q68DA7 1419 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 POLA2Q14181 598 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 USP54Q70EL1 1684 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 POTEFA5A3E0 1075 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 HMGB2P26583 209 aaKnown RBP3□□□□□ -1.93
ZNF260-203ENST00000588993 BCL9LQ86UU0 1499 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 KNDC1Q76NI1 1749 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 ARHGEF28Q8N1W1 1705 aaKnown RBP3□□□□□ -1.93
ZNF260-203ENST00000588993 SIGLEC1Q9BZZ2 1709 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 RGS12O14924 1447 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 ZBTB22O15209 634 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 PHLPP1O60346 1717 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 ITSN1Q15811 1721 aa3□□□□□ -1.93
ZNF260-203ENST00000588993 CHD2O14647 1828 aaKnown RBP2.99□□□□□ -1.93
ZNF260-203ENST00000588993 ZNF335Q9H4Z2 1342 aaPredicted RBP2.99□□□□□ -1.93
ZNF260-203ENST00000588993 SPNS2Q8IVW8 549 aa2.99□□□□□ -1.93
ZNF260-203ENST00000588993 PIK3R4Q99570 1358 aa2.99□□□□□ -1.93
ZNF260-203ENST00000588993 TULP4Q9NRJ4 1543 aa2.99□□□□□ -1.93
ZNF260-203ENST00000588993 C7P10643 843 aa2.99□□□□□ -1.93
ZNF260-203ENST00000588993 YY1P25490 414 aa2.99□□□□□ -1.93
ZNF260-203ENST00000588993 ATF5Q9Y2D1 282 aaPredicted RBP2.99□□□□□ -1.93
ZNF260-203ENST00000588993 NPHP4O75161 1426 aaPredicted RBP2.99□□□□□ -1.93
ZNF260-203ENST00000588993 BCL9O00512 1426 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 UBR1Q8IWV7 1749 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 RBM6P78332 1123 aaKnown RBP2.98□□□□□ -1.93
ZNF260-203ENST00000588993 IER5LQ5T953 404 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 NUP188Q5SRE5 1749 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.98□□□□□ -1.93
ZNF260-203ENST00000588993 TMEM94Q12767 1356 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 ARHGAP31Q2M1Z3 1444 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 THSD7AQ9UPZ6 1657 aa2.98□□□□□ -1.93
ZNF260-203ENST00000588993 QRICH2Q9H0J4 1663 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 TNRC6CQ9HCJ0 1690 aaKnown RBP2.97□□□□□ -1.93
ZNF260-203ENST00000588993 PLCH2O75038 1416 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 ATMINO43313 823 aaPredicted RBP2.97□□□□□ -1.93
ZNF260-203ENST00000588993 RGS20O76081 388 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 SLC39A7Q92504 469 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 BLMP54132 1417 aaPredicted RBP2.97□□□□□ -1.93
ZNF260-203ENST00000588993 PIP4K2BP78356 416 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 MKRN4PQ13434 485 aaPredicted RBP2.97□□□□□ -1.93
ZNF260-203ENST00000588993 ANKLE2Q86XL3 938 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 CREBZFQ9NS37 354 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 KIF1BO60333 1816 aa2.97□□□□□ -1.93
ZNF260-203ENST00000588993 IGF1RP08069 1367 aa2.96□□□□□ -1.93
ZNF260-203ENST00000588993 NOS1P29475 1434 aa2.96□□□□□ -1.93
ZNF260-203ENST00000588993 SENP3-EIF4A1A0A087X0R7 540 aa2.96□□□□□ -1.94
ZNF260-203ENST00000588993 PRELPP51888 382 aa2.96□□□□□ -1.94
ZNF260-203ENST00000588993 CARMIL1Q5VZK9 1371 aa2.96□□□□□ -1.94
ZNF260-203ENST00000588993 ABCC1P33527 1531 aa2.96□□□□□ -1.94
ZNF260-203ENST00000588993 SETBP1Q9Y6X0 1596 aa2.96□□□□□ -1.94
ZNF260-203ENST00000588993 PXDNLA1KZ92 1463 aa2.96□□□□□ -1.94
ZNF260-203ENST00000588993 THEMISQ8N1K5 641 aaPredicted RBP2.96□□□□□ -1.94
ZNF260-203ENST00000588993 AFDNP55196 1824 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms