RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 AEBP2Q6ZN18 517 aaPredicted RBP29.03■■■□□ 2.24
DNMT1-216ENST00000588952 PPLO60437 1756 aa29.03■■■□□ 2.24
DNMT1-216ENST00000588952 NUTM2DQ5VT03 806 aaPredicted RBP29■■■□□ 2.23
DNMT1-216ENST00000588952 L3MBTL2Q969R5 705 aa29■■■□□ 2.23
DNMT1-216ENST00000588952 LTKP29376 864 aa28.99■■■□□ 2.23
DNMT1-216ENST00000588952 RPGRIP1LQ68CZ1 1315 aa28.98■■■□□ 2.23
DNMT1-216ENST00000588952 TONSLQ96HA7 1378 aa28.98■■■□□ 2.23
DNMT1-216ENST00000588952 SCAF11Q99590 1463 aaKnown RBP28.94■■■□□ 2.22
DNMT1-216ENST00000588952 DCAF11Q8TEB1 546 aa28.94■■■□□ 2.22
DNMT1-216ENST00000588952 MYOM2P54296 1465 aa28.93■■■□□ 2.22
DNMT1-216ENST00000588952 TXNDC2Q86VQ3 553 aa28.93■■■□□ 2.22
DNMT1-216ENST00000588952 POLR1AO95602 1720 aaPredicted RBP28.92■■■□□ 2.22
DNMT1-216ENST00000588952 KDM2AQ9Y2K7 1162 aa28.92■■■□□ 2.22
DNMT1-216ENST00000588952 ADGRF5Q8IZF2 1346 aa28.92■■■□□ 2.22
DNMT1-216ENST00000588952 NCKAP5LQ9HCH0 1330 aa28.92■■■□□ 2.22
DNMT1-216ENST00000588952 STRCQ7RTU9 1775 aa28.9■■■□□ 2.22
DNMT1-216ENST00000588952 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.9■■■□□ 2.22
DNMT1-216ENST00000588952 NRXN1Q9ULB1 1477 aa28.9■■■□□ 2.22
DNMT1-216ENST00000588952 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
DNMT1-216ENST00000588952 SENP3Q9H4L4 574 aaPredicted RBP28.89■■■□□ 2.22
DNMT1-216ENST00000588952 EID1Q9Y6B2 187 aa28.89■■■□□ 2.22
DNMT1-216ENST00000588952 PPP1R15AO75807 674 aaPredicted RBP28.87■■■□□ 2.21
DNMT1-216ENST00000588952 VGFO15240 615 aaPredicted RBP28.86■■■□□ 2.21
DNMT1-216ENST00000588952 NRXN3Q9Y4C0 1643 aa28.86■■■□□ 2.21
DNMT1-216ENST00000588952 PLEKHG1Q9ULL1 1385 aa28.86■■■□□ 2.21
DNMT1-216ENST00000588952 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
DNMT1-216ENST00000588952 TIMELESSQ9UNS1 1208 aa28.85■■■□□ 2.21
DNMT1-216ENST00000588952 MED14O60244 1454 aa28.85■■■□□ 2.21
DNMT1-216ENST00000588952 PIK3C2GO75747 1445 aa28.84■■■□□ 2.21
DNMT1-216ENST00000588952 IQGAP1P46940 1657 aa28.83■■■□□ 2.21
DNMT1-216ENST00000588952 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.21
DNMT1-216ENST00000588952 NPHP4O75161 1426 aaPredicted RBP28.82■■■□□ 2.2
DNMT1-216ENST00000588952 SETBP1Q9Y6X0 1596 aa28.82■■■□□ 2.2
DNMT1-216ENST00000588952 NBPF8Q3BBV2 869 aa28.8■■■□□ 2.2
DNMT1-216ENST00000588952 STAC3Q96MF2 364 aa28.8■■■□□ 2.2
DNMT1-216ENST00000588952 ADAMTS13Q76LX8 1427 aa28.79■■■□□ 2.2
DNMT1-216ENST00000588952 SETD1AO15047 1707 aaKnown RBP28.76■■■□□ 2.19
DNMT1-216ENST00000588952 ALKQ9UM73 1620 aa28.76■■■□□ 2.19
DNMT1-216ENST00000588952 BCANQ96GW7 911 aa28.74■■■□□ 2.19
DNMT1-216ENST00000588952 CFAP70Q5T0N1 1121 aa28.73■■■□□ 2.19
DNMT1-216ENST00000588952 SLC26A8Q96RN1 970 aa28.73■■■□□ 2.19
DNMT1-216ENST00000588952 ASXL1Q8IXJ9 1541 aa28.72■■■□□ 2.19
DNMT1-216ENST00000588952 TRPM1Q7Z4N2 1603 aa28.72■■■□□ 2.19
DNMT1-216ENST00000588952 C14orf93Q9H972 538 aaKnown RBP28.7■■■□□ 2.18
DNMT1-216ENST00000588952 DIP2AQ14689 1571 aa28.7■■■□□ 2.18
DNMT1-216ENST00000588952 LAMC1P11047 1609 aa28.69■■■□□ 2.18
DNMT1-216ENST00000588952 KIAA1210Q9ULL0 1709 aa28.69■■■□□ 2.18
DNMT1-216ENST00000588952 METP08581 1390 aa28.67■■■□□ 2.18
DNMT1-216ENST00000588952 TBX22Q9Y458 520 aa28.66■■■□□ 2.18
DNMT1-216ENST00000588952 ADGRB1O14514 1584 aa28.66■■■□□ 2.18
DNMT1-216ENST00000588952 RALGAPBQ86X10 1494 aa28.66■■■□□ 2.18
DNMT1-216ENST00000588952 NBPF1Q3BBV0 1214 aa28.65■■■□□ 2.18
DNMT1-216ENST00000588952 TMEM132EQ6IEE7 984 aa28.63■■■□□ 2.17
DNMT1-216ENST00000588952 PTPRUQ92729 1446 aa28.61■■■□□ 2.17
DNMT1-216ENST00000588952 DMRT2Q9Y5R5 561 aa28.58■■■□□ 2.17
DNMT1-216ENST00000588952 ROCK2O75116 1388 aaKnown RBP28.58■■■□□ 2.17
DNMT1-216ENST00000588952 ZEB1P37275 1124 aaPredicted RBP28.57■■■□□ 2.16
DNMT1-216ENST00000588952 GPRASP1Q5JY77 1395 aa28.57■■■□□ 2.16
DNMT1-216ENST00000588952 CHD2O14647 1828 aaKnown RBP28.55■■■□□ 2.16
DNMT1-216ENST00000588952 PIK3R4Q99570 1358 aa28.55■■■□□ 2.16
DNMT1-216ENST00000588952 YTHDC2Q9H6S0 1430 aaKnown RBP28.54■■■□□ 2.16
DNMT1-216ENST00000588952 STRCP1A6NGW2 1772 aa28.54■■■□□ 2.16
DNMT1-216ENST00000588952 XRN1Q8IZH2 1706 aaKnown RBP28.54■■■□□ 2.16
DNMT1-216ENST00000588952 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
DNMT1-216ENST00000588952 LRPPRCP42704 1394 aaKnown RBP28.53■■■□□ 2.16
DNMT1-216ENST00000588952 ZNF335Q9H4Z2 1342 aaPredicted RBP28.5■■■□□ 2.15
DNMT1-216ENST00000588952 STK26Q9P289 416 aa28.5■■■□□ 2.15
DNMT1-216ENST00000588952 KNDC1Q76NI1 1749 aa28.49■■■□□ 2.15
DNMT1-216ENST00000588952 AMOTL2Q9Y2J4 779 aa28.49■■■□□ 2.15
DNMT1-216ENST00000588952 KCNA6P17658 529 aa28.48■■■□□ 2.15
DNMT1-216ENST00000588952 CARD11Q9BXL7 1154 aa28.48■■■□□ 2.15
DNMT1-216ENST00000588952 TECPR2O15040 1411 aa28.47■■■□□ 2.15
DNMT1-216ENST00000588952 ABCC11Q96J66 1382 aa28.47■■■□□ 2.15
DNMT1-216ENST00000588952 CPS1P31327 1500 aa28.46■■■□□ 2.15
DNMT1-216ENST00000588952 TRAK1Q9UPV9 953 aa28.45■■■□□ 2.14
DNMT1-216ENST00000588952 ROBO2Q9HCK4 1378 aa28.45■■■□□ 2.14
DNMT1-216ENST00000588952 ARHGEF28Q8N1W1 1705 aaKnown RBP28.44■■■□□ 2.14
DNMT1-216ENST00000588952 DLC1Q96QB1 1528 aa28.43■■■□□ 2.14
DNMT1-216ENST00000588952 PTCH1Q13635 1447 aa28.43■■■□□ 2.14
DNMT1-216ENST00000588952 NKTRP30414 1462 aaKnown RBP28.41■■■□□ 2.14
DNMT1-216ENST00000588952 PLEKHH1Q9ULM0 1364 aa28.4■■■□□ 2.14
DNMT1-216ENST00000588952 LTBP4Q8N2S1 1624 aa28.4■■■□□ 2.14
DNMT1-216ENST00000588952 USP47Q96K76 1375 aa28.37■■■□□ 2.13
DNMT1-216ENST00000588952 WAPLQ7Z5K2 1190 aa28.37■■■□□ 2.13
DNMT1-216ENST00000588952 FAM135BQ49AJ0 1406 aa28.36■■■□□ 2.13
DNMT1-216ENST00000588952 PRAM1Q96QH2 718 aa28.36■■■□□ 2.13
DNMT1-216ENST00000588952 RBM33Q96EV2 1170 aaKnown RBP28.35■■■□□ 2.13
DNMT1-216ENST00000588952 SIRT1Q96EB6 747 aa28.34■■■□□ 2.13
DNMT1-216ENST00000588952 LRRC7Q96NW7 1537 aa28.33■■■□□ 2.13
DNMT1-216ENST00000588952 SAFB2Q14151 953 aaKnown RBP eCLIP28.31■■■□□ 2.12
DNMT1-216ENST00000588952 PROSER2Q86WR7 435 aaPredicted RBP28.31■■■□□ 2.12
DNMT1-216ENST00000588952 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.31■■■□□ 2.12
DNMT1-216ENST00000588952 XIRP1Q702N8 1843 aaKnown RBP28.31■■■□□ 2.12
DNMT1-216ENST00000588952 QRICH2Q9H0J4 1663 aa28.3■■■□□ 2.12
DNMT1-216ENST00000588952 EIF3AQ14152 1382 aaKnown RBP28.3■■■□□ 2.12
DNMT1-216ENST00000588952 TMEM94Q12767 1356 aa28.29■■■□□ 2.12
DNMT1-216ENST00000588952 CENPJQ9HC77 1338 aaPredicted RBP28.29■■■□□ 2.12
DNMT1-216ENST00000588952 HSPA5P11021 654 aaKnown RBP28.29■■■□□ 2.12
DNMT1-216ENST00000588952 POGKQ9P215 609 aa28.29■■■□□ 2.12
DNMT1-216ENST00000588952 ST20-MTHFSA0A0A6YYL1 179 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms