RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SLC26A8Q96RN1 970 aa26.63■■□□□ 1.85
TPM4-206ENST00000587201 ZFYVE9O95405 1425 aa26.63■■□□□ 1.85
TPM4-206ENST00000587201 LRRC7Q96NW7 1537 aa26.62■■□□□ 1.85
TPM4-206ENST00000587201 SENP3Q9H4L4 574 aaPredicted RBP26.61■■□□□ 1.85
TPM4-206ENST00000587201 SCAF1Q9H7N4 1312 aaKnown RBP26.6■■□□□ 1.85
TPM4-206ENST00000587201 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.59■■□□□ 1.85
TPM4-206ENST00000587201 PIP4K2BP78356 416 aa26.58■■□□□ 1.85
TPM4-206ENST00000587201 SPHKAPQ2M3C7 1700 aa26.58■■□□□ 1.85
TPM4-206ENST00000587201 PLEKHG1Q9ULL1 1385 aa26.58■■□□□ 1.84
TPM4-206ENST00000587201 NUTM2DQ5VT03 806 aaPredicted RBP26.56■■□□□ 1.84
TPM4-206ENST00000587201 KCNA6P17658 529 aa26.55■■□□□ 1.84
TPM4-206ENST00000587201 SLC4A1APQ9BWU0 796 aaKnown RBP26.52■■□□□ 1.84
TPM4-206ENST00000587201 ZNF326Q5BKZ1 582 aaKnown RBP26.49■■□□□ 1.83
TPM4-206ENST00000587201 TRPM2O94759 1503 aa26.49■■□□□ 1.83
TPM4-206ENST00000587201 PROSER2Q86WR7 435 aaPredicted RBP26.47■■□□□ 1.83
TPM4-206ENST00000587201 TBX22Q9Y458 520 aa26.47■■□□□ 1.83
TPM4-206ENST00000587201 CLTCL1P53675 1640 aa26.47■■□□□ 1.83
TPM4-206ENST00000587201 ALKQ9UM73 1620 aa26.47■■□□□ 1.83
TPM4-206ENST00000587201 TMEM94Q12767 1356 aa26.46■■□□□ 1.83
TPM4-206ENST00000587201 NWD1Q149M9 1564 aa26.45■■□□□ 1.82
TPM4-206ENST00000587201 XIRP1Q702N8 1843 aaKnown RBP26.44■■□□□ 1.82
TPM4-206ENST00000587201 NKTRP30414 1462 aaKnown RBP26.43■■□□□ 1.82
TPM4-206ENST00000587201 ADAMTS13Q76LX8 1427 aa26.43■■□□□ 1.82
TPM4-206ENST00000587201 HSPA1LP34931 641 aa26.43■■□□□ 1.82
TPM4-206ENST00000587201 RBM33Q96EV2 1170 aaKnown RBP26.42■■□□□ 1.82
TPM4-206ENST00000587201 DIP2AQ14689 1571 aa26.4■■□□□ 1.82
TPM4-206ENST00000587201 CHD2O14647 1828 aaKnown RBP26.39■■□□□ 1.82
TPM4-206ENST00000587201 FOXD1Q16676 465 aa26.39■■□□□ 1.82
TPM4-206ENST00000587201 KIF1BO60333 1816 aa26.38■■□□□ 1.81
TPM4-206ENST00000587201 SETD5Q9C0A6 1442 aa26.37■■□□□ 1.81
TPM4-206ENST00000587201 PIK3R4Q99570 1358 aa26.36■■□□□ 1.81
TPM4-206ENST00000587201 DISP3Q9P2K9 1392 aa26.36■■□□□ 1.81
TPM4-206ENST00000587201 MPHOSPH9Q99550 1183 aa26.36■■□□□ 1.81
TPM4-206ENST00000587201 NEXMIFQ5QGS0 1516 aa26.34■■□□□ 1.81
TPM4-206ENST00000587201 ACIN1Q9UKV3 1341 aaKnown RBP26.34■■□□□ 1.81
TPM4-206ENST00000587201 MSH6P52701 1360 aa26.33■■□□□ 1.8
TPM4-206ENST00000587201 SETBP1Q9Y6X0 1596 aa26.32■■□□□ 1.8
TPM4-206ENST00000587201 AMOTL2Q9Y2J4 779 aa26.31■■□□□ 1.8
TPM4-206ENST00000587201 NRXN3Q9Y4C0 1643 aa26.31■■□□□ 1.8
TPM4-206ENST00000587201 VGFO15240 615 aaPredicted RBP26.28■■□□□ 1.8
TPM4-206ENST00000587201 C14orf37Q86TY3 774 aa26.28■■□□□ 1.8
TPM4-206ENST00000587201 CCDC144AA2RUR9 1427 aa26.28■■□□□ 1.8
TPM4-206ENST00000587201 PTPRUQ92729 1446 aa26.28■■□□□ 1.8
TPM4-206ENST00000587201 RPGRIP1LQ68CZ1 1315 aa26.27■■□□□ 1.8
TPM4-206ENST00000587201 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
TPM4-206ENST00000587201 NCOA3Q9Y6Q9 1424 aa26.26■■□□□ 1.79
TPM4-206ENST00000587201 FAM135BQ49AJ0 1406 aa26.25■■□□□ 1.79
TPM4-206ENST00000587201 METP08581 1390 aa26.24■■□□□ 1.79
TPM4-206ENST00000587201 SLAIN2Q9P270 581 aa26.21■■□□□ 1.79
TPM4-206ENST00000587201 RGL3Q3MIN7 710 aa26.2■■□□□ 1.78
TPM4-206ENST00000587201 C19orf44Q9H6X5 657 aa26.19■■□□□ 1.78
TPM4-206ENST00000587201 XRN1Q8IZH2 1706 aaKnown RBP26.19■■□□□ 1.78
TPM4-206ENST00000587201 ROBO1Q9Y6N7 1651 aa26.19■■□□□ 1.78
TPM4-206ENST00000587201 PPLO60437 1756 aa26.18■■□□□ 1.78
TPM4-206ENST00000587201 ATF3P18847 181 aa26.16■■□□□ 1.78
TPM4-206ENST00000587201 CADPS2Q86UW7 1296 aa26.16■■□□□ 1.78
TPM4-206ENST00000587201 SPATA31E1Q6ZUB1 1445 aa26.15■■□□□ 1.78
TPM4-206ENST00000587201 MED1Q15648 1581 aaPredicted RBP26.14■■□□□ 1.78
TPM4-206ENST00000587201 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.14■■□□□ 1.77
TPM4-206ENST00000587201 ILDR2Q71H61 639 aa26.12■■□□□ 1.77
TPM4-206ENST00000587201 ADGRF5Q8IZF2 1346 aa26.11■■□□□ 1.77
TPM4-206ENST00000587201 ANKRD30BQ9BXX2 1392 aa26.1■■□□□ 1.77
TPM4-206ENST00000587201 SETD1AO15047 1707 aaKnown RBP26.09■■□□□ 1.77
TPM4-206ENST00000587201 HRCP23327 699 aa26.09■■□□□ 1.77
TPM4-206ENST00000587201 DCCP43146 1447 aa26.07■■□□□ 1.76
TPM4-206ENST00000587201 IFT172Q9UG01 1749 aa26.05■■□□□ 1.76
TPM4-206ENST00000587201 PTCH1Q13635 1447 aa26.05■■□□□ 1.76
TPM4-206ENST00000587201 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
TPM4-206ENST00000587201 ADGRL3Q9HAR2 1447 aa26.04■■□□□ 1.76
TPM4-206ENST00000587201 ROBO2Q9HCK4 1378 aa26.03■■□□□ 1.76
TPM4-206ENST00000587201 PHLPP1O60346 1717 aa26.02■■□□□ 1.76
TPM4-206ENST00000587201 PIK3C2GO75747 1445 aa25.99■■□□□ 1.75
TPM4-206ENST00000587201 PRAG1Q86YV5 1406 aa25.99■■□□□ 1.75
TPM4-206ENST00000587201 BRINP3Q76B58 766 aa25.99■■□□□ 1.75
TPM4-206ENST00000587201 NALCNQ8IZF0 1738 aa25.99■■□□□ 1.75
TPM4-206ENST00000587201 MST1RQ04912 1400 aa25.98■■□□□ 1.75
TPM4-206ENST00000587201 STK26Q9P289 416 aa25.97■■□□□ 1.75
TPM4-206ENST00000587201 JCADQ9P266 1359 aa25.95■■□□□ 1.75
TPM4-206ENST00000587201 TMEM132EQ6IEE7 984 aa25.95■■□□□ 1.74
TPM4-206ENST00000587201 COL16A1Q07092 1604 aaPredicted RBP25.94■■□□□ 1.74
TPM4-206ENST00000587201 AHDC1Q5TGY3 1603 aaPredicted RBP25.94■■□□□ 1.74
TPM4-206ENST00000587201 MYOM2P54296 1465 aa25.93■■□□□ 1.74
TPM4-206ENST00000587201 LRPPRCP42704 1394 aaKnown RBP25.93■■□□□ 1.74
TPM4-206ENST00000587201 ASXL1Q8IXJ9 1541 aa25.92■■□□□ 1.74
TPM4-206ENST00000587201 C14orf93Q9H972 538 aaKnown RBP25.91■■□□□ 1.74
TPM4-206ENST00000587201 NRXN1Q9ULB1 1477 aa25.91■■□□□ 1.74
TPM4-206ENST00000587201 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
TPM4-206ENST00000587201 ABCC11Q96J66 1382 aa25.9■■□□□ 1.74
TPM4-206ENST00000587201 TECPR2O15040 1411 aa25.88■■□□□ 1.73
TPM4-206ENST00000587201 C1orf167Q5SNV9 1468 aa25.88■■□□□ 1.73
TPM4-206ENST00000587201 SOCS7O14512 581 aa25.88■■□□□ 1.73
TPM4-206ENST00000587201 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
TPM4-206ENST00000587201 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
TPM4-206ENST00000587201 DCAF11Q8TEB1 546 aa25.86■■□□□ 1.73
TPM4-206ENST00000587201 KDM2AQ9Y2K7 1162 aa25.86■■□□□ 1.73
TPM4-206ENST00000587201 DHX57Q6P158 1386 aaKnown RBP25.85■■□□□ 1.73
TPM4-206ENST00000587201 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
TPM4-206ENST00000587201 LAMC1P11047 1609 aa25.85■■□□□ 1.73
TPM4-206ENST00000587201 DDX17Q92841 729 aaKnown RBP25.83■■□□□ 1.73
TPM4-206ENST00000587201 NHSL1Q5SYE7 1610 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms