RNA–Protein interactions for RNA: ENST00000587167.1

SPHK1-204, Transcript of sphingosine kinase 1, humanhuman

TSL 4

Gene SPHK1, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-204ENST00000587167 RPRD2Q5VT52 1461 aaKnown RBP29.07■■■□□ 2.24
SPHK1-204ENST00000587167 XIRP1Q702N8 1843 aaKnown RBP29.06■■■□□ 2.24
SPHK1-204ENST00000587167 STAG3Q9UJ98 1225 aa29.05■■■□□ 2.24
SPHK1-204ENST00000587167 ADGRB3O60242 1522 aa29.04■■■□□ 2.24
SPHK1-204ENST00000587167 SPHKAPQ2M3C7 1700 aa29.03■■■□□ 2.24
SPHK1-204ENST00000587167 HRCP23327 699 aa29.03■■■□□ 2.24
SPHK1-204ENST00000587167 SOCS7O14512 581 aa29.02■■■□□ 2.24
SPHK1-204ENST00000587167 SLC4A1APQ9BWU0 796 aaKnown RBP29.02■■■□□ 2.24
SPHK1-204ENST00000587167 SLC52A1Q9NWF4 448 aa29.02■■■□□ 2.24
SPHK1-204ENST00000587167 MYO5BQ9ULV0 1848 aa28.97■■■□□ 2.23
SPHK1-204ENST00000587167 MPHOSPH9Q99550 1183 aa28.97■■■□□ 2.23
SPHK1-204ENST00000587167 MED1Q15648 1581 aaPredicted RBP28.96■■■□□ 2.23
SPHK1-204ENST00000587167 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
SPHK1-204ENST00000587167 TMEM131LA2VDJ0 1609 aa28.92■■■□□ 2.22
SPHK1-204ENST00000587167 KCNA6P17658 529 aa28.91■■■□□ 2.22
SPHK1-204ENST00000587167 ZFYVE9O95405 1425 aa28.91■■■□□ 2.22
SPHK1-204ENST00000587167 SLC26A8Q96RN1 970 aa28.9■■■□□ 2.22
SPHK1-204ENST00000587167 NWD1Q149M9 1564 aa28.88■■■□□ 2.21
SPHK1-204ENST00000587167 FOXD1Q16676 465 aa28.88■■■□□ 2.21
SPHK1-204ENST00000587167 TRPM2O94759 1503 aa28.86■■■□□ 2.21
SPHK1-204ENST00000587167 TMEM94Q12767 1356 aa28.85■■■□□ 2.21
SPHK1-204ENST00000587167 CLTCL1P53675 1640 aa28.84■■■□□ 2.21
SPHK1-204ENST00000587167 KIF1BO60333 1816 aa28.84■■■□□ 2.21
SPHK1-204ENST00000587167 RIMS2Q9UQ26 1411 aa28.84■■■□□ 2.21
SPHK1-204ENST00000587167 PLEKHG1Q9ULL1 1385 aa28.83■■■□□ 2.21
SPHK1-204ENST00000587167 NKTRP30414 1462 aaKnown RBP28.82■■■□□ 2.2
SPHK1-204ENST00000587167 CHD2O14647 1828 aaKnown RBP28.81■■■□□ 2.2
SPHK1-204ENST00000587167 FAM135BQ49AJ0 1406 aa28.79■■■□□ 2.2
SPHK1-204ENST00000587167 PROSER2Q86WR7 435 aaPredicted RBP28.79■■■□□ 2.2
SPHK1-204ENST00000587167 HDGFP51858 240 aaKnown RBP28.78■■■□□ 2.2
SPHK1-204ENST00000587167 SENP3Q9H4L4 574 aaPredicted RBP28.77■■■□□ 2.2
SPHK1-204ENST00000587167 RBM33Q96EV2 1170 aaKnown RBP28.75■■■□□ 2.19
SPHK1-204ENST00000587167 BCANQ96GW7 911 aa28.75■■■□□ 2.19
SPHK1-204ENST00000587167 PPP1R15AO75807 674 aaPredicted RBP28.73■■■□□ 2.19
SPHK1-204ENST00000587167 CHGAP10645 457 aaKnown RBP28.73■■■□□ 2.19
SPHK1-204ENST00000587167 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.73■■■□□ 2.19
SPHK1-204ENST00000587167 TBX22Q9Y458 520 aa28.73■■■□□ 2.19
SPHK1-204ENST00000587167 ROBO1Q9Y6N7 1651 aa28.71■■■□□ 2.19
SPHK1-204ENST00000587167 ADAMTS13Q76LX8 1427 aa28.71■■■□□ 2.19
SPHK1-204ENST00000587167 CCDC144AA2RUR9 1427 aa28.69■■■□□ 2.18
SPHK1-204ENST00000587167 DIP2AQ14689 1571 aa28.68■■■□□ 2.18
SPHK1-204ENST00000587167 DHX57Q6P158 1386 aaKnown RBP28.67■■■□□ 2.18
SPHK1-204ENST00000587167 ANKRD30BQ9BXX2 1392 aa28.67■■■□□ 2.18
SPHK1-204ENST00000587167 MSH6P52701 1360 aa28.65■■■□□ 2.18
SPHK1-204ENST00000587167 NUTM2DQ5VT03 806 aaPredicted RBP28.65■■■□□ 2.18
SPHK1-204ENST00000587167 PHF23Q9BUL5 403 aaPredicted RBP28.65■■■□□ 2.18
SPHK1-204ENST00000587167 NCOA3Q9Y6Q9 1424 aa28.63■■■□□ 2.17
SPHK1-204ENST00000587167 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
SPHK1-204ENST00000587167 SLAIN2Q9P270 581 aa28.6■■■□□ 2.17
SPHK1-204ENST00000587167 NRXN3Q9Y4C0 1643 aa28.58■■■□□ 2.17
SPHK1-204ENST00000587167 ZNF326Q5BKZ1 582 aaKnown RBP28.58■■■□□ 2.17
SPHK1-204ENST00000587167 PPLO60437 1756 aa28.57■■■□□ 2.16
SPHK1-204ENST00000587167 RGS17Q9UGC6 210 aaPredicted RBP28.56■■■□□ 2.16
SPHK1-204ENST00000587167 PTPRUQ92729 1446 aa28.55■■■□□ 2.16
SPHK1-204ENST00000587167 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.55■■■□□ 2.16
SPHK1-204ENST00000587167 IFT172Q9UG01 1749 aa28.55■■■□□ 2.16
SPHK1-204ENST00000587167 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
SPHK1-204ENST00000587167 SPATA31E1Q6ZUB1 1445 aa28.54■■■□□ 2.16
SPHK1-204ENST00000587167 PHLPP1O60346 1717 aa28.54■■■□□ 2.16
SPHK1-204ENST00000587167 NEXMIFQ5QGS0 1516 aa28.53■■■□□ 2.16
SPHK1-204ENST00000587167 RGL3Q3MIN7 710 aa28.51■■■□□ 2.15
SPHK1-204ENST00000587167 XRN1Q8IZH2 1706 aaKnown RBP28.5■■■□□ 2.15
SPHK1-204ENST00000587167 AMOTL2Q9Y2J4 779 aa28.5■■■□□ 2.15
SPHK1-204ENST00000587167 C19orf44Q9H6X5 657 aa28.49■■■□□ 2.15
SPHK1-204ENST00000587167 COL16A1Q07092 1604 aaPredicted RBP28.47■■■□□ 2.15
SPHK1-204ENST00000587167 RPGRIP1LQ68CZ1 1315 aa28.45■■■□□ 2.15
SPHK1-204ENST00000587167 C14orf37Q86TY3 774 aa28.45■■■□□ 2.14
SPHK1-204ENST00000587167 CADPS2Q86UW7 1296 aa28.45■■■□□ 2.14
SPHK1-204ENST00000587167 SIN3AQ96ST3 1273 aa28.44■■■□□ 2.14
SPHK1-204ENST00000587167 METP08581 1390 aa28.42■■■□□ 2.14
SPHK1-204ENST00000587167 JCADQ9P266 1359 aa28.42■■■□□ 2.14
SPHK1-204ENST00000587167 AHDC1Q5TGY3 1603 aaPredicted RBP28.41■■■□□ 2.14
SPHK1-204ENST00000587167 ATF3P18847 181 aa28.4■■■□□ 2.14
SPHK1-204ENST00000587167 DCCP43146 1447 aa28.39■■■□□ 2.14
SPHK1-204ENST00000587167 NEUROD1Q13562 356 aa28.39■■■□□ 2.14
SPHK1-204ENST00000587167 VGFO15240 615 aaPredicted RBP28.37■■■□□ 2.13
SPHK1-204ENST00000587167 POTEAQ6S8J7 498 aa28.36■■■□□ 2.13
SPHK1-204ENST00000587167 SETD1AO15047 1707 aaKnown RBP28.34■■■□□ 2.13
SPHK1-204ENST00000587167 SHPRHQ149N8 1683 aa28.32■■■□□ 2.12
SPHK1-204ENST00000587167 BRINP3Q76B58 766 aa28.32■■■□□ 2.12
SPHK1-204ENST00000587167 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
SPHK1-204ENST00000587167 MYOM2P54296 1465 aa28.32■■■□□ 2.12
SPHK1-204ENST00000587167 ADGRF5Q8IZF2 1346 aa28.31■■■□□ 2.12
SPHK1-204ENST00000587167 MST1RQ04912 1400 aa28.31■■■□□ 2.12
SPHK1-204ENST00000587167 DCAF11Q8TEB1 546 aa28.3■■■□□ 2.12
SPHK1-204ENST00000587167 SPATA31A6Q5VVP1 1343 aa28.29■■■□□ 2.12
SPHK1-204ENST00000587167 NALCNQ8IZF0 1738 aa28.29■■■□□ 2.12
SPHK1-204ENST00000587167 LRP6O75581 1613 aa28.29■■■□□ 2.12
SPHK1-204ENST00000587167 ASXL1Q8IXJ9 1541 aa28.28■■■□□ 2.12
SPHK1-204ENST00000587167 ADGRL3Q9HAR2 1447 aa28.28■■■□□ 2.12
SPHK1-204ENST00000587167 CLSPNQ9HAW4 1339 aa28.28■■■□□ 2.12
SPHK1-204ENST00000587167 KDM2AQ9Y2K7 1162 aa28.28■■■□□ 2.12
SPHK1-204ENST00000587167 NHSL1Q5SYE7 1610 aa28.26■■■□□ 2.11
SPHK1-204ENST00000587167 NRXN1Q9ULB1 1477 aa28.25■■■□□ 2.11
SPHK1-204ENST00000587167 PIK3C2GO75747 1445 aa28.24■■■□□ 2.11
SPHK1-204ENST00000587167 L3MBTL2Q969R5 705 aa28.23■■■□□ 2.11
SPHK1-204ENST00000587167 PRAG1Q86YV5 1406 aa28.23■■■□□ 2.11
SPHK1-204ENST00000587167 LAMC1P11047 1609 aa28.22■■■□□ 2.11
SPHK1-204ENST00000587167 PTCH1Q13635 1447 aa28.22■■■□□ 2.11
SPHK1-204ENST00000587167 STAC3Q96MF2 364 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms