RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 PKD2Q13563 968 aa16.76■□□□□ 0.27
DNMT1-207ENST00000586588 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
DNMT1-207ENST00000586588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.27
DNMT1-207ENST00000586588 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
DNMT1-207ENST00000586588 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
DNMT1-207ENST00000586588 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
DNMT1-207ENST00000586588 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
DNMT1-207ENST00000586588 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
DNMT1-207ENST00000586588 TRAK2O60296 914 aa16.75■□□□□ 0.27
DNMT1-207ENST00000586588 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
DNMT1-207ENST00000586588 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
DNMT1-207ENST00000586588 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
DNMT1-207ENST00000586588 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
DNMT1-207ENST00000586588 ARXQ96QS3 562 aa16.74■□□□□ 0.27
DNMT1-207ENST00000586588 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
DNMT1-207ENST00000586588 IGHDP01880 384 aa16.73■□□□□ 0.27
DNMT1-207ENST00000586588 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
DNMT1-207ENST00000586588 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
DNMT1-207ENST00000586588 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
DNMT1-207ENST00000586588 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-207ENST00000586588 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
DNMT1-207ENST00000586588 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
DNMT1-207ENST00000586588 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
DNMT1-207ENST00000586588 SLFN5Q08AF3 891 aa16.71■□□□□ 0.27
DNMT1-207ENST00000586588 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
DNMT1-207ENST00000586588 TRIM44Q96DX7 344 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-207ENST00000586588 CGNL1Q0VF96 1302 aa16.71■□□□□ 0.27
DNMT1-207ENST00000586588 DDX11L8A8MPP1 907 aa16.7■□□□□ 0.26
DNMT1-207ENST00000586588 TERF1P54274 439 aa16.7■□□□□ 0.26
DNMT1-207ENST00000586588 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
DNMT1-207ENST00000586588 PRDM4Q9UKN5 801 aa16.7■□□□□ 0.26
DNMT1-207ENST00000586588 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
DNMT1-207ENST00000586588 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
DNMT1-207ENST00000586588 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
DNMT1-207ENST00000586588 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
DNMT1-207ENST00000586588 MAP7D2Q96T17 732 aa16.67■□□□□ 0.26
DNMT1-207ENST00000586588 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
DNMT1-207ENST00000586588 MYO5CQ9NQX4 1742 aa16.66■□□□□ 0.26
DNMT1-207ENST00000586588 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
DNMT1-207ENST00000586588 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
DNMT1-207ENST00000586588 AAMPQ13685 434 aa16.65■□□□□ 0.26
DNMT1-207ENST00000586588 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
DNMT1-207ENST00000586588 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
DNMT1-207ENST00000586588 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 PANK3Q9H999 370 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 SYCP2Q9BX26 1530 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.25
DNMT1-207ENST00000586588 ARHGEF5Q12774 1597 aa16.64■□□□□ 0.25
DNMT1-207ENST00000586588 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
DNMT1-207ENST00000586588 C9orf84Q5VXU9 1444 aa16.63■□□□□ 0.25
DNMT1-207ENST00000586588 LAMC1P11047 1609 aa16.63■□□□□ 0.25
DNMT1-207ENST00000586588 KDM5DQ9BY66 1539 aa16.63■□□□□ 0.25
DNMT1-207ENST00000586588 OFD1O75665 1012 aa16.62■□□□□ 0.25
DNMT1-207ENST00000586588 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
DNMT1-207ENST00000586588 ANKRD50Q9ULJ7 1429 aa16.61■□□□□ 0.25
DNMT1-207ENST00000586588 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
DNMT1-207ENST00000586588 BCAR3O75815 825 aa16.61■□□□□ 0.25
DNMT1-207ENST00000586588 TESK2Q96S53 571 aa16.6■□□□□ 0.25
DNMT1-207ENST00000586588 WDR7Q9Y4E6 1490 aa16.6■□□□□ 0.25
DNMT1-207ENST00000586588 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
DNMT1-207ENST00000586588 CCDC173Q0VFZ6 552 aa16.6■□□□□ 0.25
DNMT1-207ENST00000586588 DISP3Q9P2K9 1392 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 E9PSI1 815 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 PTMSP20962 102 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
DNMT1-207ENST00000586588 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
DNMT1-207ENST00000586588 PPP1R9BQ96SB3 815 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 RBM10P98175 930 aaKnown RBP16.59■□□□□ 0.25
DNMT1-207ENST00000586588 ZSCAN30Q86W11 494 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
DNMT1-207ENST00000586588 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
DNMT1-207ENST00000586588 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.25
DNMT1-207ENST00000586588 NUP155O75694 1391 aa16.58■□□□□ 0.25
DNMT1-207ENST00000586588 PLCH2O75038 1416 aa16.58■□□□□ 0.24
DNMT1-207ENST00000586588 PRDM15P57071 1507 aaPredicted RBP16.58■□□□□ 0.24
DNMT1-207ENST00000586588 ERBINQ96RT1 1412 aa16.57■□□□□ 0.24
DNMT1-207ENST00000586588 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
DNMT1-207ENST00000586588 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
DNMT1-207ENST00000586588 RIPK4P57078 832 aa16.57■□□□□ 0.24
DNMT1-207ENST00000586588 RTEL1-TNFRSF6BF6WH68 1400 aa16.57■□□□□ 0.24
DNMT1-207ENST00000586588 DDIT3P35638 169 aa16.56■□□□□ 0.24
DNMT1-207ENST00000586588 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
DNMT1-207ENST00000586588 SPRYD3Q8NCJ5 442 aa16.56■□□□□ 0.24
DNMT1-207ENST00000586588 MTERF4Q7Z6M4 381 aaKnown RBP16.56■□□□□ 0.24
DNMT1-207ENST00000586588 SMAP1Q8IYB5 467 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-207ENST00000586588 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
DNMT1-207ENST00000586588 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
DNMT1-207ENST00000586588 TMF1P82094 1093 aa16.55■□□□□ 0.24
DNMT1-207ENST00000586588 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
DNMT1-207ENST00000586588 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-207ENST00000586588 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-207ENST00000586588 ABCC1P33527 1531 aa16.54■□□□□ 0.24
DNMT1-207ENST00000586588 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
DNMT1-207ENST00000586588 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
DNMT1-207ENST00000586588 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
DNMT1-207ENST00000586588 GBP4Q96PP9 640 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 356 ms